RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 DCAF11Q8TEB1 546 aa26.85■■□□□ 1.89
FMR1-208ENST00000440235 GLIPR1L2Q4G1C9 344 aa26.85■■□□□ 1.89
FMR1-208ENST00000440235 KNSTRNQ9Y448 316 aa26.85■■□□□ 1.89
FMR1-208ENST00000440235 NCLP19338 710 aaKnown RBP26.84■■□□□ 1.89
FMR1-208ENST00000440235 ERCC6Q03468 1493 aa26.82■■□□□ 1.88
FMR1-208ENST00000440235 BECN1Q14457 450 aa26.81■■□□□ 1.88
FMR1-208ENST00000440235 DNMBPQ6XZF7 1577 aa26.79■■□□□ 1.88
FMR1-208ENST00000440235 NAP1L5Q96NT1 182 aaPredicted RBP26.78■■□□□ 1.88
FMR1-208ENST00000440235 TIAM1Q13009 1591 aa26.78■■□□□ 1.88
FMR1-208ENST00000440235 TRIM44Q96DX7 344 aaPredicted RBP26.78■■□□□ 1.88
FMR1-208ENST00000440235 AQRO60306 1485 aaKnown RBP eCLIP26.73■■□□□ 1.877e-6■■□□□ 12.2
FMR1-208ENST00000440235 SLC4A3P48751 1232 aa26.73■■□□□ 1.87
FMR1-208ENST00000440235 SLKQ9H2G2 1235 aaPredicted RBP26.73■■□□□ 1.87
FMR1-208ENST00000440235 CASKIN1Q8WXD9 1431 aa26.73■■□□□ 1.87
FMR1-208ENST00000440235 L3MBTL2Q969R5 705 aa26.72■■□□□ 1.87
FMR1-208ENST00000440235 PLEKHD1A6NEE1 506 aa26.72■■□□□ 1.87
FMR1-208ENST00000440235 TIMELESSQ9UNS1 1208 aa26.72■■□□□ 1.87
FMR1-208ENST00000440235 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
FMR1-208ENST00000440235 ERICH6BQ5W0A0 696 aa26.68■■□□□ 1.86
FMR1-208ENST00000440235 GZF1Q9H116 711 aaPredicted RBP26.68■■□□□ 1.86
FMR1-208ENST00000440235 FGD6Q6ZV73 1430 aa26.68■■□□□ 1.86
FMR1-208ENST00000440235 FTSJ3Q8IY81 847 aaKnown RBP26.66■■□□□ 1.86
FMR1-208ENST00000440235 FYCO1Q9BQS8 1478 aa26.65■■□□□ 1.86
FMR1-208ENST00000440235 RCAN3Q9UKA8 241 aa26.65■■□□□ 1.86
FMR1-208ENST00000440235 PCF11O94913 1555 aaKnown RBP26.63■■□□□ 1.85
FMR1-208ENST00000440235 PKD2Q13563 968 aa26.63■■□□□ 1.85
FMR1-208ENST00000440235 MPHOSPH9Q99550 1183 aa26.62■■□□□ 1.85
FMR1-208ENST00000440235 PLIN1O60240 522 aa26.61■■□□□ 1.85
FMR1-208ENST00000440235 URB2Q14146 1524 aaKnown RBP26.59■■□□□ 1.85
FMR1-208ENST00000440235 ZBTB7CA1YPR0 619 aa26.59■■□□□ 1.85
FMR1-208ENST00000440235 IPO9Q96P70 1041 aaKnown RBP26.59■■□□□ 1.85
FMR1-208ENST00000440235 CCDC18Q5T9S5 1454 aa26.59■■□□□ 1.85
FMR1-208ENST00000440235 EFCAB5A4FU69 1503 aa26.58■■□□□ 1.84
FMR1-208ENST00000440235 U2SURPO15042 1029 aaKnown RBP26.56■■□□□ 1.84
FMR1-208ENST00000440235 MYH16Q9H6N6 1097 aa26.56■■□□□ 1.84
FMR1-208ENST00000440235 NCOA2Q15596 1464 aa26.54■■□□□ 1.84
FMR1-208ENST00000440235 MYOM3Q5VTT5 1437 aa26.54■■□□□ 1.84
FMR1-208ENST00000440235 SAFB2Q14151 953 aaKnown RBP eCLIP26.53■■□□□ 1.84
FMR1-208ENST00000440235 ARID3AQ99856 593 aa26.52■■□□□ 1.84
FMR1-208ENST00000440235 LAMC3Q9Y6N6 1575 aa26.51■■□□□ 1.84
FMR1-208ENST00000440235 NUDCQ9Y266 331 aa26.51■■□□□ 1.84
FMR1-208ENST00000440235 PLCB2Q00722 1185 aa26.51■■□□□ 1.83
FMR1-208ENST00000440235 CLUAP1Q96AJ1 413 aa26.48■■□□□ 1.83
FMR1-208ENST00000440235 ESF1Q9H501 851 aaKnown RBP26.48■■□□□ 1.83
FMR1-208ENST00000440235 EXOC6Q8TAG9 804 aa26.47■■□□□ 1.83
FMR1-208ENST00000440235 PTMAP06454 111 aaKnown RBP26.47■■□□□ 1.83
FMR1-208ENST00000440235 DNTTIP2Q5QJE6 756 aaKnown RBP26.46■■□□□ 1.83
FMR1-208ENST00000440235 MAP3K1Q13233 1512 aa26.46■■□□□ 1.83
FMR1-208ENST00000440235 GOLGA6L22H0YM25 854 aa26.45■■□□□ 1.82
FMR1-208ENST00000440235 PRKRIP1Q9H875 184 aaPredicted RBP26.45■■□□□ 1.82
FMR1-208ENST00000440235 ZNF644Q9H582 1327 aaPredicted RBP26.44■■□□□ 1.82
FMR1-208ENST00000440235 CCDC146Q8IYE0 955 aa26.44■■□□□ 1.82
FMR1-208ENST00000440235 CUL7Q14999 1698 aa26.43■■□□□ 1.82
FMR1-208ENST00000440235 CFAP53Q96M91 514 aa26.43■■□□□ 1.82
FMR1-208ENST00000440235 JPH4Q96JJ6 628 aa26.42■■□□□ 1.82
FMR1-208ENST00000440235 APBB1O00213 710 aa26.42■■□□□ 1.82
FMR1-208ENST00000440235 HSP90AB1P08238 724 aaKnown RBP26.41■■□□□ 1.82
FMR1-208ENST00000440235 TAOK2Q9UL54 1235 aa26.4■■□□□ 1.82
FMR1-208ENST00000440235 TCERG1O14776 1098 aaKnown RBP26.4■■□□□ 1.82
FMR1-208ENST00000440235 TMF1P82094 1093 aa26.4■■□□□ 1.82
FMR1-208ENST00000440235 GRIN2BQ13224 1484 aa26.39■■□□□ 1.82
FMR1-208ENST00000440235 UACAQ9BZF9 1416 aa26.39■■□□□ 1.81
FMR1-208ENST00000440235 NPM1P06748 294 aaKnown RBP eCLIP26.38■■□□□ 1.81
FMR1-208ENST00000440235 CARMIL2Q6F5E8 1435 aa26.37■■□□□ 1.81
FMR1-208ENST00000440235 SOX12O15370 315 aa26.36■■□□□ 1.81
FMR1-208ENST00000440235 PDE4AP27815 886 aa26.36■■□□□ 1.81
FMR1-208ENST00000440235 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
FMR1-208ENST00000440235 C14orf37Q86TY3 774 aa26.35■■□□□ 1.81
FMR1-208ENST00000440235 CDCA8Q53HL2 280 aa26.35■■□□□ 1.81
FMR1-208ENST00000440235 PRDM2Q13029 1718 aa26.35■■□□□ 1.81
FMR1-208ENST00000440235 WDR97A6NE52 1622 aa26.34■■□□□ 1.81
FMR1-208ENST00000440235 ST20-MTHFSA0A0A6YYL1 179 aa26.34■■□□□ 1.81
FMR1-208ENST00000440235 MAPK8IP3Q9UPT6 1336 aa26.34■■□□□ 1.81
FMR1-208ENST00000440235 FOXD4L1Q9NU39 408 aa26.32■■□□□ 1.8
FMR1-208ENST00000440235 BCL2L13Q9BXK5 485 aa26.31■■□□□ 1.8
FMR1-208ENST00000440235 HFM1A2PYH4 1435 aa26.29■■□□□ 1.8
FMR1-208ENST00000440235 KTN1Q86UP2 1357 aaKnown RBP26.28■■□□□ 1.8
FMR1-208ENST00000440235 PAK3O75914 559 aaPredicted RBP26.27■■□□□ 1.8
FMR1-208ENST00000440235 CDK13Q14004 1512 aaKnown RBP26.27■■□□□ 1.8
FMR1-208ENST00000440235 NUP155O75694 1391 aa26.26■■□□□ 1.8
FMR1-208ENST00000440235 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.26■■□□□ 1.8
FMR1-208ENST00000440235 EHBP1L1Q8N3D4 1523 aa26.26■■□□□ 1.79
FMR1-208ENST00000440235 MAPKBP1O60336 1514 aa26.26■■□□□ 1.79
FMR1-208ENST00000440235 RRP7AQ9Y3A4 280 aaKnown RBP26.25■■□□□ 1.79
FMR1-208ENST00000440235 MFAP1P55081 439 aaKnown RBP26.25■■□□□ 1.79
FMR1-208ENST00000440235 HSCBQ8IWL3 235 aa26.25■■□□□ 1.79
FMR1-208ENST00000440235 MORC1Q86VD1 984 aa26.25■■□□□ 1.79
FMR1-208ENST00000440235 NAIPQ13075 1403 aa26.24■■□□□ 1.79
FMR1-208ENST00000440235 FANCIQ9NVI1 1328 aa26.24■■□□□ 1.79
FMR1-208ENST00000440235 HNRNPMP52272 730 aaKnown RBP eCLIP26.22■■□□□ 1.79
FMR1-208ENST00000440235 CRBNQ96SW2 442 aa26.22■■□□□ 1.79
FMR1-208ENST00000440235 CCDC184Q52MB2 194 aa26.22■■□□□ 1.79
FMR1-208ENST00000440235 ROCK2O75116 1388 aaKnown RBP26.21■■□□□ 1.79
FMR1-208ENST00000440235 U2AF1L5P0DN76 240 aaPredicted RBP26.2■■□□□ 1.79
FMR1-208ENST00000440235 U2AF1Q01081 240 aaKnown RBP eCLIP26.2■■□□□ 1.79
FMR1-208ENST00000440235 SNAPC4Q5SXM2 1469 aa26.2■■□□□ 1.79
FMR1-208ENST00000440235 EPRSP07814 1512 aaKnown RBP26.2■■□□□ 1.78
FMR1-208ENST00000440235 ZNF608Q9ULD9 1512 aaPredicted RBP26.2■■□□□ 1.78
FMR1-208ENST00000440235 STK26Q9P289 416 aa26.2■■□□□ 1.78
FMR1-208ENST00000440235 IFT140Q96RY7 1462 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms