RNA–Protein interactions for RNA: ENST00000440028.2

MSL3P1-202, Transcript of MSL complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene MSL3P1, Length 1,468 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1-202ENST00000440028 CCDC88BA6NC98 1476 aa8.56□□□□□ -1.04
MSL3P1-202ENST00000440028 PDS5BQ9NTI5 1447 aa8.55□□□□□ -1.04
MSL3P1-202ENST00000440028 NPM1P06748 294 aaKnown RBP eCLIP8.55□□□□□ -1.04
MSL3P1-202ENST00000440028 LAMC3Q9Y6N6 1575 aa8.54□□□□□ -1.04
MSL3P1-202ENST00000440028 BRPF1P55201 1214 aaPredicted RBP8.53□□□□□ -1.04
MSL3P1-202ENST00000440028 GOLGA3Q08378 1498 aa8.52□□□□□ -1.05
MSL3P1-202ENST00000440028 VASPP50552 380 aaPredicted RBP8.51□□□□□ -1.05
MSL3P1-202ENST00000440028 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
MSL3P1-202ENST00000440028 SSUH2Q9Y2M2 353 aa8.5□□□□□ -1.05
MSL3P1-202ENST00000440028 TAF7LQ5H9L4 462 aa8.49□□□□□ -1.05
MSL3P1-202ENST00000440028 ZNF579Q8NAF0 562 aaKnown RBP8.49□□□□□ -1.05
MSL3P1-202ENST00000440028 CFTRP13569 1480 aa8.49□□□□□ -1.05
MSL3P1-202ENST00000440028 PRR29P0C7W0 189 aa8.48□□□□□ -1.05
MSL3P1-202ENST00000440028 LCE2DQ5TA82 110 aaPredicted RBP8.48□□□□□ -1.05
MSL3P1-202ENST00000440028 KIF21AQ7Z4S6 1674 aa8.47□□□□□ -1.05
MSL3P1-202ENST00000440028 FANCD2Q9BXW9 1451 aa8.47□□□□□ -1.05
MSL3P1-202ENST00000440028 KIF21BO75037 1637 aa8.46□□□□□ -1.05
MSL3P1-202ENST00000440028 FARP1Q9Y4F1 1045 aaPredicted RBP8.46□□□□□ -1.05
MSL3P1-202ENST00000440028 MRC2Q9UBG0 1479 aa8.46□□□□□ -1.06
MSL3P1-202ENST00000440028 RIMBP3CA6NJZ7 1639 aa8.46□□□□□ -1.06
MSL3P1-202ENST00000440028 RIMBP3BA6NNM3 1639 aa8.46□□□□□ -1.06
MSL3P1-202ENST00000440028 RIMBP3Q9UFD9 1639 aa8.46□□□□□ -1.06
MSL3P1-202ENST00000440028 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
MSL3P1-202ENST00000440028 VPS8Q8N3P4 1428 aa8.45□□□□□ -1.06
MSL3P1-202ENST00000440028 CCER2I3L3R5 266 aa8.43□□□□□ -1.06
MSL3P1-202ENST00000440028 IFNLR1Q8IU57 520 aaPredicted RBP8.43□□□□□ -1.06
MSL3P1-202ENST00000440028 NECTIN2Q92692 538 aa8.42□□□□□ -1.06
MSL3P1-202ENST00000440028 ARID3AQ99856 593 aa8.42□□□□□ -1.06
MSL3P1-202ENST00000440028 ZNF692Q9BU19 519 aaPredicted RBP8.42□□□□□ -1.06
MSL3P1-202ENST00000440028 ABCC8Q09428 1581 aa8.42□□□□□ -1.06
MSL3P1-202ENST00000440028 PDE4CQ08493 712 aa8.41□□□□□ -1.06
MSL3P1-202ENST00000440028 DHX57Q6P158 1386 aaKnown RBP8.41□□□□□ -1.06
MSL3P1-202ENST00000440028 KCTD17Q8N5Z5 321 aa8.4□□□□□ -1.06
MSL3P1-202ENST00000440028 BCCIPQ9P287 314 aaKnown RBP eCLIP8.4□□□□□ -1.06
MSL3P1-202ENST00000440028 WDR62O43379 1518 aa8.4□□□□□ -1.07
MSL3P1-202ENST00000440028 URB2Q14146 1524 aaKnown RBP8.4□□□□□ -1.07
MSL3P1-202ENST00000440028 MKRN4PQ13434 485 aaPredicted RBP8.39□□□□□ -1.07
MSL3P1-202ENST00000440028 GALR2O43603 387 aaPredicted RBP8.38□□□□□ -1.07
MSL3P1-202ENST00000440028 ECM2O94769 699 aaPredicted RBP8.38□□□□□ -1.07
MSL3P1-202ENST00000440028 PRDM2Q13029 1718 aa8.38□□□□□ -1.07
MSL3P1-202ENST00000440028 CLIP1P30622 1438 aa8.37□□□□□ -1.07
MSL3P1-202ENST00000440028 RAD21O60216 631 aa8.37□□□□□ -1.07
MSL3P1-202ENST00000440028 DEKP35659 375 aaKnown RBP8.37□□□□□ -1.07
MSL3P1-202ENST00000440028 NEUROD2Q15784 382 aa8.37□□□□□ -1.07
MSL3P1-202ENST00000440028 MAMSTRQ6ZN01 415 aa8.36□□□□□ -1.07
MSL3P1-202ENST00000440028 RGS22Q8NE09 1264 aa8.36□□□□□ -1.07
MSL3P1-202ENST00000440028 FAM163AQ96GL9 167 aaPredicted RBP8.35□□□□□ -1.07
MSL3P1-202ENST00000440028 ZRANB1Q9UGI0 708 aa8.35□□□□□ -1.07
MSL3P1-202ENST00000440028 BIVM-ERCC5R4GMW8 1640 aa8.35□□□□□ -1.07
MSL3P1-202ENST00000440028 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
MSL3P1-202ENST00000440028 TOP2BQ02880 1626 aa8.34□□□□□ -1.07
MSL3P1-202ENST00000440028 POTEJP0CG39 1038 aa8.33□□□□□ -1.08
MSL3P1-202ENST00000440028 DHX37Q8IY37 1157 aaKnown RBP8.33□□□□□ -1.08
MSL3P1-202ENST00000440028 POLR3GLQ9BT43 218 aa8.33□□□□□ -1.08
MSL3P1-202ENST00000440028 RRBP1Q9P2E9 1410 aaKnown RBP8.33□□□□□ -1.08
MSL3P1-202ENST00000440028 ILDR1Q86SU0 546 aaPredicted RBP8.32□□□□□ -1.08
MSL3P1-202ENST00000440028 C1orf115Q9H7X2 142 aa8.32□□□□□ -1.08
MSL3P1-202ENST00000440028 ARHGEF11O15085 1522 aa8.32□□□□□ -1.08
MSL3P1-202ENST00000440028 TOPBP1Q92547 1522 aa8.32□□□□□ -1.08
MSL3P1-202ENST00000440028 SOGA1O94964 1423 aa8.31□□□□□ -1.08
MSL3P1-202ENST00000440028 ZNF608Q9ULD9 1512 aaPredicted RBP8.3□□□□□ -1.08
MSL3P1-202ENST00000440028 RTL5Q5HYW3 569 aaPredicted RBP8.3□□□□□ -1.08
MSL3P1-202ENST00000440028 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
MSL3P1-202ENST00000440028 TRAIPQ9BWF2 469 aa8.3□□□□□ -1.08
MSL3P1-202ENST00000440028 ANP32CO43423 234 aa8.29□□□□□ -1.08
MSL3P1-202ENST00000440028 LMOD2Q6P5Q4 547 aa8.29□□□□□ -1.08
MSL3P1-202ENST00000440028 PPP4R2Q9NY27 417 aa8.28□□□□□ -1.08
MSL3P1-202ENST00000440028 NOP58Q9Y2X3 529 aaKnown RBP8.28□□□□□ -1.08
MSL3P1-202ENST00000440028 IFT140Q96RY7 1462 aa8.28□□□□□ -1.08
MSL3P1-202ENST00000440028 USP35Q9P2H5 1018 aa8.27□□□□□ -1.09
MSL3P1-202ENST00000440028 AQRO60306 1485 aaKnown RBP eCLIP8.27□□□□□ -1.09
MSL3P1-202ENST00000440028 RAD54L2Q9Y4B4 1467 aa8.27□□□□□ -1.09
MSL3P1-202ENST00000440028 ERICH3Q5RHP9 1530 aa8.27□□□□□ -1.09
MSL3P1-202ENST00000440028 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 RSPH4AQ5TD94 716 aa8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 P3H3Q8IVL6 736 aa8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 DNMBPQ6XZF7 1577 aa8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 TDRD9Q8NDG6 1382 aaKnown RBP8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 E9PSI1 815 aa8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 TMCO4Q5TGY1 634 aa8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 METRNQ9UJH8 293 aa8.26□□□□□ -1.09
MSL3P1-202ENST00000440028 POLA1P09884 1462 aaPredicted RBP8.25□□□□□ -1.09
MSL3P1-202ENST00000440028 C7P10643 843 aa8.25□□□□□ -1.09
MSL3P1-202ENST00000440028 APBB1O00213 710 aa8.24□□□□□ -1.09
MSL3P1-202ENST00000440028 PROM2Q8N271 834 aa8.24□□□□□ -1.09
MSL3P1-202ENST00000440028 SLC39A7Q92504 469 aa8.24□□□□□ -1.09
MSL3P1-202ENST00000440028 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
MSL3P1-202ENST00000440028 CUX1P39880 1505 aa8.23□□□□□ -1.09
MSL3P1-202ENST00000440028 MAP3K1Q13233 1512 aa8.23□□□□□ -1.09
MSL3P1-202ENST00000440028 PPP1R15AO75807 674 aaPredicted RBP8.23□□□□□ -1.09
MSL3P1-202ENST00000440028 ANP32AP39687 249 aaKnown RBP8.23□□□□□ -1.09
MSL3P1-202ENST00000440028 RBM25P49756 843 aaKnown RBP8.23□□□□□ -1.09
MSL3P1-202ENST00000440028 RUSC2Q8N2Y8 1516 aa8.22□□□□□ -1.09
MSL3P1-202ENST00000440028 C11orf95C9JLR9 678 aaPredicted RBP8.22□□□□□ -1.09
MSL3P1-202ENST00000440028 RGL2O15211 777 aa8.22□□□□□ -1.09
MSL3P1-202ENST00000440028 SCUBE2Q9NQ36 999 aa8.22□□□□□ -1.09
MSL3P1-202ENST00000440028 FGD5Q6ZNL6 1462 aa8.22□□□□□ -1.09
MSL3P1-202ENST00000440028 CCNB3Q8WWL7 1395 aa8.22□□□□□ -1.09
MSL3P1-202ENST00000440028 CLSTN1O94985 981 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms