RNA–Protein interactions for RNA: ENST00000440028.2

MSL3P1-202, Transcript of MSL complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene MSL3P1, Length 1,468 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1-202ENST00000440028 AEBP2Q6ZN18 517 aaPredicted RBP17.1■□□□□ 0.33
MSL3P1-202ENST00000440028 CHIC1Q5VXU3 224 aa15.99■□□□□ 0.15
MSL3P1-202ENST00000440028 SENP3Q9H4L4 574 aaPredicted RBP14.75□□□□□ -0.05
MSL3P1-202ENST00000440028 PHF23Q9BUL5 403 aaPredicted RBP14.41□□□□□ -0.1
MSL3P1-202ENST00000440028 POTEDQ86YR6 584 aa14.38□□□□□ -0.11
MSL3P1-202ENST00000440028 FOXD1Q16676 465 aa13.82□□□□□ -0.2
MSL3P1-202ENST00000440028 MSH5O43196 834 aa13.29□□□□□ -0.28
MSL3P1-202ENST00000440028 PIAS4Q8N2W9 510 aaPredicted RBP12.68□□□□□ -0.38
MSL3P1-202ENST00000440028 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
MSL3P1-202ENST00000440028 ADRA2BP18089 450 aa12.14□□□□□ -0.47
MSL3P1-202ENST00000440028 PLPPR3Q6T4P5 718 aa11.96□□□□□ -0.49
MSL3P1-202ENST00000440028 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
MSL3P1-202ENST00000440028 SLC24A1O60721 1099 aa11.86□□□□□ -0.51
MSL3P1-202ENST00000440028 DMRT2Q9Y5R5 561 aa11.57□□□□□ -0.56
MSL3P1-202ENST00000440028 NISCHQ9Y2I1 1504 aa11.43□□□□□ -0.58
MSL3P1-202ENST00000440028 MAPK8IP2Q13387 824 aaPredicted RBP11.4□□□□□ -0.58
MSL3P1-202ENST00000440028 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
MSL3P1-202ENST00000440028 SCAF1Q9H7N4 1312 aaKnown RBP11.18□□□□□ -0.62
MSL3P1-202ENST00000440028 POTEHQ6S545 545 aa11.09□□□□□ -0.63
MSL3P1-202ENST00000440028 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
MSL3P1-202ENST00000440028 DCAF8L1A6NGE4 600 aa11.02□□□□□ -0.65
MSL3P1-202ENST00000440028 EHMT2Q96KQ7 1210 aa10.99□□□□□ -0.65
MSL3P1-202ENST00000440028 HOXD11P31277 338 aaPredicted RBP10.84□□□□□ -0.67
MSL3P1-202ENST00000440028 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
MSL3P1-202ENST00000440028 AMER1Q5JTC6 1135 aaPredicted RBP10.74□□□□□ -0.69
MSL3P1-202ENST00000440028 DNAJC5BQ9UF47 199 aa10.7□□□□□ -0.7
MSL3P1-202ENST00000440028 NCBP3Q53F19 620 aaKnown RBP10.69□□□□□ -0.7
MSL3P1-202ENST00000440028 RTN4Q9NQC3 1192 aaKnown RBP10.61□□□□□ -0.71
MSL3P1-202ENST00000440028 RNF216Q9NWF9 866 aaPredicted RBP10.51□□□□□ -0.73
MSL3P1-202ENST00000440028 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.74
MSL3P1-202ENST00000440028 CNKSR2Q8WXI2 1034 aa10.38□□□□□ -0.75
MSL3P1-202ENST00000440028 PPP4R3CPQ6ZMV5 832 aa10.36□□□□□ -0.75
MSL3P1-202ENST00000440028 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
MSL3P1-202ENST00000440028 ARXQ96QS3 562 aa10.33□□□□□ -0.76
MSL3P1-202ENST00000440028 MYT1Q01538 1121 aa10.32□□□□□ -0.76
MSL3P1-202ENST00000440028 PELP1Q8IZL8 1130 aaKnown RBP10.31□□□□□ -0.76
MSL3P1-202ENST00000440028 KCNA4P22459 653 aa10.29□□□□□ -0.76
MSL3P1-202ENST00000440028 DSG3P32926 999 aa10.24□□□□□ -0.77
MSL3P1-202ENST00000440028 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.24□□□□□ -0.77
MSL3P1-202ENST00000440028 ABCC9O60706 1549 aa10.08□□□□□ -0.8
MSL3P1-202ENST00000440028 APLP2Q06481 763 aa10.08□□□□□ -0.8
MSL3P1-202ENST00000440028 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
MSL3P1-202ENST00000440028 HRCP23327 699 aa10.06□□□□□ -0.8
MSL3P1-202ENST00000440028 CAPN15O75808 1086 aa10.05□□□□□ -0.8
MSL3P1-202ENST00000440028 SPINK5Q9NQ38 1064 aaPredicted RBP10.04□□□□□ -0.8
MSL3P1-202ENST00000440028 RANGAP1P46060 587 aaPredicted RBP10.01□□□□□ -0.81
MSL3P1-202ENST00000440028 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
MSL3P1-202ENST00000440028 CCDC180Q9P1Z9 1646 aa10□□□□□ -0.81
MSL3P1-202ENST00000440028 BCANQ96GW7 911 aa10□□□□□ -0.81
MSL3P1-202ENST00000440028 PRKCSHP14314 528 aaPredicted RBP9.97□□□□□ -0.81
MSL3P1-202ENST00000440028 U3KPZ7 1027 aaPredicted RBP9.97□□□□□ -0.81
MSL3P1-202ENST00000440028 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
MSL3P1-202ENST00000440028 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
MSL3P1-202ENST00000440028 HOMEZQ8IX15 550 aa9.94□□□□□ -0.82
MSL3P1-202ENST00000440028 CHRDL2Q6WN34 429 aa9.91□□□□□ -0.82
MSL3P1-202ENST00000440028 TIMELESSQ9UNS1 1208 aa9.89□□□□□ -0.83
MSL3P1-202ENST00000440028 RBM42Q9BTD8 480 aaKnown RBP9.82□□□□□ -0.84
MSL3P1-202ENST00000440028 TULP1O00294 542 aaPredicted RBP9.78□□□□□ -0.84
MSL3P1-202ENST00000440028 NPM3O75607 178 aaKnown RBP9.75□□□□□ -0.85
MSL3P1-202ENST00000440028 PLCB2Q00722 1185 aa9.75□□□□□ -0.85
MSL3P1-202ENST00000440028 DCAF8L2P0C7V8 631 aa9.73□□□□□ -0.85
MSL3P1-202ENST00000440028 ABCB7O75027 752 aa9.72□□□□□ -0.85
MSL3P1-202ENST00000440028 DCAF1Q9Y4B6 1507 aa9.71□□□□□ -0.86
MSL3P1-202ENST00000440028 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
MSL3P1-202ENST00000440028 ZNF219Q9P2Y4 722 aaPredicted RBP9.7□□□□□ -0.86
MSL3P1-202ENST00000440028 TRHP20396 242 aaPredicted RBP9.67□□□□□ -0.86
MSL3P1-202ENST00000440028 ZEB1P37275 1124 aaPredicted RBP9.67□□□□□ -0.86
MSL3P1-202ENST00000440028 ZCCHC6Q5VYS8 1495 aaKnown RBP9.66□□□□□ -0.86
MSL3P1-202ENST00000440028 GTF3C3Q9Y5Q9 886 aa9.63□□□□□ -0.87
MSL3P1-202ENST00000440028 DNAJC5Q9H3Z4 198 aa9.59□□□□□ -0.87
MSL3P1-202ENST00000440028 PCGF6Q9BYE7 350 aa9.57□□□□□ -0.88
MSL3P1-202ENST00000440028 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
MSL3P1-202ENST00000440028 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
MSL3P1-202ENST00000440028 RB1CC1Q8TDY2 1594 aa9.54□□□□□ -0.88
MSL3P1-202ENST00000440028 PODXL2Q9NZ53 605 aa9.53□□□□□ -0.88
MSL3P1-202ENST00000440028 HAX1O00165 279 aa9.51□□□□□ -0.89
MSL3P1-202ENST00000440028 PABPN1Q86U42 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
MSL3P1-202ENST00000440028 NACADO15069 1562 aa9.5□□□□□ -0.89
MSL3P1-202ENST00000440028 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
MSL3P1-202ENST00000440028 MYO15BQ96JP2 1530 aa9.49□□□□□ -0.89
MSL3P1-202ENST00000440028 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
MSL3P1-202ENST00000440028 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
MSL3P1-202ENST00000440028 PPARGC1BQ86YN6 1023 aaKnown RBP9.47□□□□□ -0.89
MSL3P1-202ENST00000440028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.42□□□□□ -0.9
MSL3P1-202ENST00000440028 HNRNPUL2Q1KMD3 747 aaKnown RBP9.42□□□□□ -0.9
MSL3P1-202ENST00000440028 TMEM132AQ24JP5 1023 aa9.41□□□□□ -0.9
MSL3P1-202ENST00000440028 AKT1S1Q96B36 256 aa9.41□□□□□ -0.9
MSL3P1-202ENST00000440028 PLSCR2Q9NRY7 297 aa9.41□□□□□ -0.9
MSL3P1-202ENST00000440028 SUPT5HO00267 1087 aaKnown RBP9.4□□□□□ -0.91
MSL3P1-202ENST00000440028 EIF5BO60841 1220 aaKnown RBP9.38□□□□□ -0.91
MSL3P1-202ENST00000440028 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
MSL3P1-202ENST00000440028 KLHL34Q8N239 644 aa9.38□□□□□ -0.91
MSL3P1-202ENST00000440028 LHX8Q68G74 356 aa9.37□□□□□ -0.91
MSL3P1-202ENST00000440028 SLC4A2P04920 1241 aa9.35□□□□□ -0.91
MSL3P1-202ENST00000440028 ZBTB22O15209 634 aa9.34□□□□□ -0.91
MSL3P1-202ENST00000440028 CENPBP07199 599 aaPredicted RBP9.34□□□□□ -0.91
MSL3P1-202ENST00000440028 EVX2Q03828 476 aa9.34□□□□□ -0.91
MSL3P1-202ENST00000440028 C14orf37Q86TY3 774 aa9.34□□□□□ -0.91
MSL3P1-202ENST00000440028 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.92
MSL3P1-202ENST00000440028 ACIN1Q9UKV3 1341 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms