RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 RRP1P56182 461 aaKnown RBP14.37□□□□□ -0.11
CHEK1-204ENST00000438015 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.37□□□□□ -0.11
CHEK1-204ENST00000438015 CRBNQ96SW2 442 aa14.37□□□□□ -0.11
CHEK1-204ENST00000438015 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
CHEK1-204ENST00000438015 CCDC7Q96M83 1385 aa14.36□□□□□ -0.11
CHEK1-204ENST00000438015 IGF1RP08069 1367 aa14.35□□□□□ -0.11
CHEK1-204ENST00000438015 TSPY4P0CV99 314 aa14.35□□□□□ -0.11
CHEK1-204ENST00000438015 TSPY10P0CW01 314 aa14.35□□□□□ -0.11
CHEK1-204ENST00000438015 GSE1Q14687 1217 aa14.35□□□□□ -0.11
CHEK1-204ENST00000438015 LRRC9Q6ZRR7 1453 aa14.35□□□□□ -0.11
CHEK1-204ENST00000438015 ZNF644Q9H582 1327 aaPredicted RBP14.34□□□□□ -0.11
CHEK1-204ENST00000438015 CHGAP10645 457 aaKnown RBP14.33□□□□□ -0.12
CHEK1-204ENST00000438015 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
CHEK1-204ENST00000438015 NFKBIBQ15653 356 aa14.32□□□□□ -0.12
CHEK1-204ENST00000438015 MAPKBP1O60336 1514 aa14.31□□□□□ -0.12
CHEK1-204ENST00000438015 CNTLNQ9NXG0 1405 aa14.3□□□□□ -0.12
CHEK1-204ENST00000438015 KNSTRNQ9Y448 316 aa14.29□□□□□ -0.12
CHEK1-204ENST00000438015 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
CHEK1-204ENST00000438015 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
CHEK1-204ENST00000438015 FRAT2O75474 233 aaPredicted RBP14.29□□□□□ -0.12
CHEK1-204ENST00000438015 ARID3AQ99856 593 aa14.29□□□□□ -0.12
CHEK1-204ENST00000438015 BECN1Q14457 450 aa14.27□□□□□ -0.12
CHEK1-204ENST00000438015 FGD6Q6ZV73 1430 aa14.27□□□□□ -0.13
CHEK1-204ENST00000438015 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
CHEK1-204ENST00000438015 CLUAP1Q96AJ1 413 aa14.26□□□□□ -0.13
CHEK1-204ENST00000438015 ZBTB7CA1YPR0 619 aa14.26□□□□□ -0.13
CHEK1-204ENST00000438015 GLIPR1L2Q4G1C9 344 aa14.26□□□□□ -0.13
CHEK1-204ENST00000438015 USP47Q96K76 1375 aa14.26□□□□□ -0.13
CHEK1-204ENST00000438015 UACAQ9BZF9 1416 aa14.26□□□□□ -0.13
CHEK1-204ENST00000438015 BCL2L13Q9BXK5 485 aa14.24□□□□□ -0.13
CHEK1-204ENST00000438015 NLRP13Q86W25 1043 aa14.23□□□□□ -0.13
CHEK1-204ENST00000438015 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
CHEK1-204ENST00000438015 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
CHEK1-204ENST00000438015 USP35Q9P2H5 1018 aa14.22□□□□□ -0.13
CHEK1-204ENST00000438015 TRIM44Q96DX7 344 aaPredicted RBP14.22□□□□□ -0.13
CHEK1-204ENST00000438015 KTN1Q86UP2 1357 aaKnown RBP14.21□□□□□ -0.13
CHEK1-204ENST00000438015 RAD54L2Q9Y4B4 1467 aa14.21□□□□□ -0.14
CHEK1-204ENST00000438015 NCLP19338 710 aaKnown RBP14.21□□□□□ -0.14
CHEK1-204ENST00000438015 NUP155O75694 1391 aa14.2□□□□□ -0.14
CHEK1-204ENST00000438015 C20orf194Q5TEA3 1177 aa14.2□□□□□ -0.14
CHEK1-204ENST00000438015 PANK3Q9H999 370 aa14.2□□□□□ -0.14
CHEK1-204ENST00000438015 ROCK2O75116 1388 aaKnown RBP14.2□□□□□ -0.14
CHEK1-204ENST00000438015 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
CHEK1-204ENST00000438015 MYBBP1AQ9BQG0 1328 aaKnown RBP14.19□□□□□ -0.14
CHEK1-204ENST00000438015 RALBP1Q15311 655 aa14.19□□□□□ -0.14
CHEK1-204ENST00000438015 RRP7AQ9Y3A4 280 aaKnown RBP14.19□□□□□ -0.14
CHEK1-204ENST00000438015 CFTRP13569 1480 aa14.17□□□□□ -0.14
CHEK1-204ENST00000438015 VSIG10Q8N0Z9 540 aa14.17□□□□□ -0.14
CHEK1-204ENST00000438015 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
CHEK1-204ENST00000438015 ANP32BQ92688 251 aaKnown RBP14.16□□□□□ -0.14
CHEK1-204ENST00000438015 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
CHEK1-204ENST00000438015 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
CHEK1-204ENST00000438015 PNNQ9H307 717 aaKnown RBP14.16□□□□□ -0.14
CHEK1-204ENST00000438015 PLEKHD1A6NEE1 506 aa14.15□□□□□ -0.14
CHEK1-204ENST00000438015 SLC24A1O60721 1099 aa14.15□□□□□ -0.14
CHEK1-204ENST00000438015 TIAM1Q13009 1591 aa14.15□□□□□ -0.14
CHEK1-204ENST00000438015 MFAP1P55081 439 aaKnown RBP14.14□□□□□ -0.15
CHEK1-204ENST00000438015 FTSJ3Q8IY81 847 aaKnown RBP14.14□□□□□ -0.15
CHEK1-204ENST00000438015 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
CHEK1-204ENST00000438015 AQRO60306 1485 aaKnown RBP eCLIP14.13□□□□□ -0.155e-8■■■■■ 34.4
CHEK1-204ENST00000438015 HNRNPMP52272 730 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHEK1-204ENST00000438015 TMF1P82094 1093 aa14.13□□□□□ -0.15
CHEK1-204ENST00000438015 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
CHEK1-204ENST00000438015 ADAMTS8Q9UP79 889 aa14.13□□□□□ -0.15
CHEK1-204ENST00000438015 NAIPQ13075 1403 aa14.13□□□□□ -0.15
CHEK1-204ENST00000438015 APAF1O14727 1248 aa14.12□□□□□ -0.15
CHEK1-204ENST00000438015 PTPRKQ15262 1439 aa14.12□□□□□ -0.15
CHEK1-204ENST00000438015 CUX1P39880 1505 aa14.12□□□□□ -0.15
CHEK1-204ENST00000438015 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
CHEK1-204ENST00000438015 MS4A1P11836 297 aa14.12□□□□□ -0.15
CHEK1-204ENST00000438015 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
CHEK1-204ENST00000438015 SMG6Q86US8 1419 aaKnown RBP14.11□□□□□ -0.15
CHEK1-204ENST00000438015 NBPF1Q3BBV0 1214 aa14.11□□□□□ -0.15
CHEK1-204ENST00000438015 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
CHEK1-204ENST00000438015 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
CHEK1-204ENST00000438015 POGKQ9P215 609 aa14.1□□□□□ -0.15
CHEK1-204ENST00000438015 CENPQQ7L2Z9 268 aaPredicted RBP14.09□□□□□ -0.15
CHEK1-204ENST00000438015 HFM1A2PYH4 1435 aa14.09□□□□□ -0.15
CHEK1-204ENST00000438015 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
CHEK1-204ENST00000438015 PANK1Q8TE04 598 aa14.09□□□□□ -0.15
CHEK1-204ENST00000438015 GOLGA6L3A6NEY3 463 aa14.08□□□□□ -0.16
CHEK1-204ENST00000438015 BCAR3O75815 825 aa14.08□□□□□ -0.16
CHEK1-204ENST00000438015 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
CHEK1-204ENST00000438015 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
CHEK1-204ENST00000438015 SAFB2Q14151 953 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHEK1-204ENST00000438015 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
CHEK1-204ENST00000438015 HSP90AB1P08238 724 aaKnown RBP14.06□□□□□ -0.16
CHEK1-204ENST00000438015 L1TD1Q5T7N2 865 aaKnown RBP14.05□□□□□ -0.16
CHEK1-204ENST00000438015 APBB1O00213 710 aa14.04□□□□□ -0.16
CHEK1-204ENST00000438015 RSPH6AQ9H0K4 717 aa14.03□□□□□ -0.16
CHEK1-204ENST00000438015 HSP90AA2PQ14568 343 aaPredicted RBP14.03□□□□□ -0.16
CHEK1-204ENST00000438015 CASKIN1Q8WXD9 1431 aa14.02□□□□□ -0.17
CHEK1-204ENST00000438015 HSCBQ8IWL3 235 aa14.02□□□□□ -0.17
CHEK1-204ENST00000438015 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
CHEK1-204ENST00000438015 DNAJC5BQ9UF47 199 aa14□□□□□ -0.17
CHEK1-204ENST00000438015 NCOA1Q15788 1441 aa14□□□□□ -0.17
CHEK1-204ENST00000438015 PCF11O94913 1555 aaKnown RBP14□□□□□ -0.17
CHEK1-204ENST00000438015 CENPJQ9HC77 1338 aaPredicted RBP13.99□□□□□ -0.17
CHEK1-204ENST00000438015 ITPRIPQ8IWB1 547 aa13.99□□□□□ -0.17
CHEK1-204ENST00000438015 PDS5BQ9NTI5 1447 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms