RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 NISCHQ9Y2I1 1504 aa19.35■□□□□ 0.69
CHEK1-204ENST00000438015 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
CHEK1-204ENST00000438015 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
CHEK1-204ENST00000438015 DCAF8L2P0C7V8 631 aa18.61■□□□□ 0.57
CHEK1-204ENST00000438015 PCGF6Q9BYE7 350 aa18.31■□□□□ 0.52
CHEK1-204ENST00000438015 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
CHEK1-204ENST00000438015 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
CHEK1-204ENST00000438015 HRCP23327 699 aa17.88■□□□□ 0.45
CHEK1-204ENST00000438015 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
CHEK1-204ENST00000438015 LOC105371045A0A1W2PR82 267 aa17.62■□□□□ 0.41
CHEK1-204ENST00000438015 CHIC1Q5VXU3 224 aa17.53■□□□□ 0.4
CHEK1-204ENST00000438015 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
CHEK1-204ENST00000438015 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
CHEK1-204ENST00000438015 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
CHEK1-204ENST00000438015 YTHDC1Q96MU7 727 aaKnown RBP17.15■□□□□ 0.34
CHEK1-204ENST00000438015 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
CHEK1-204ENST00000438015 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
CHEK1-204ENST00000438015 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
CHEK1-204ENST00000438015 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
CHEK1-204ENST00000438015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
CHEK1-204ENST00000438015 CENPBP07199 599 aaPredicted RBP16.95■□□□□ 0.3
CHEK1-204ENST00000438015 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
CHEK1-204ENST00000438015 RANGAP1P46060 587 aaPredicted RBP16.86■□□□□ 0.29
CHEK1-204ENST00000438015 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
CHEK1-204ENST00000438015 DIEXFQ68CQ4 756 aaKnown RBP16.73■□□□□ 0.27
CHEK1-204ENST00000438015 NEUROD1Q13562 356 aa16.68■□□□□ 0.26
CHEK1-204ENST00000438015 ACIN1Q9UKV3 1341 aaKnown RBP16.64■□□□□ 0.25
CHEK1-204ENST00000438015 UBTFP17480 764 aaKnown RBP16.59■□□□□ 0.25
CHEK1-204ENST00000438015 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
CHEK1-204ENST00000438015 APLP2Q06481 763 aa16.5■□□□□ 0.23
CHEK1-204ENST00000438015 DCAF1Q9Y4B6 1507 aa16.48■□□□□ 0.23
CHEK1-204ENST00000438015 MYT1Q01538 1121 aa16.43■□□□□ 0.22
CHEK1-204ENST00000438015 BCANQ96GW7 911 aa16.31■□□□□ 0.2
CHEK1-204ENST00000438015 ITGAEP38570 1179 aa16.3■□□□□ 0.2
CHEK1-204ENST00000438015 ZNF316A6NFI3 1004 aaPredicted RBP16.24■□□□□ 0.19
CHEK1-204ENST00000438015 ZCCHC6Q5VYS8 1495 aaKnown RBP16.23■□□□□ 0.19
CHEK1-204ENST00000438015 MIER1Q8N108 512 aa16.19■□□□□ 0.18
CHEK1-204ENST00000438015 ATP1B4Q9UN42 357 aaPredicted RBP16.12■□□□□ 0.17
CHEK1-204ENST00000438015 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
CHEK1-204ENST00000438015 CCDC180Q9P1Z9 1646 aa16.06■□□□□ 0.16
CHEK1-204ENST00000438015 NEFLP07196 543 aa16.05■□□□□ 0.16
CHEK1-204ENST00000438015 CNGB1Q14028 1251 aaPredicted RBP15.99■□□□□ 0.15
CHEK1-204ENST00000438015 FKBP8Q14318 412 aa15.84■□□□□ 0.13
CHEK1-204ENST00000438015 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
CHEK1-204ENST00000438015 ABCC9O60706 1549 aa15.83■□□□□ 0.12
CHEK1-204ENST00000438015 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
CHEK1-204ENST00000438015 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
CHEK1-204ENST00000438015 RSF1Q96T23 1441 aaPredicted RBP15.81■□□□□ 0.12
CHEK1-204ENST00000438015 HIRIP3Q9BW71 556 aaPredicted RBP15.8■□□□□ 0.12
CHEK1-204ENST00000438015 TRIM52Q96A61 297 aa15.77■□□□□ 0.11
CHEK1-204ENST00000438015 DDX10Q13206 875 aaKnown RBP15.73■□□□□ 0.11
CHEK1-204ENST00000438015 SUPT16HQ9Y5B9 1047 aaKnown RBP15.72■□□□□ 0.11
CHEK1-204ENST00000438015 IRX6P78412 446 aaPredicted RBP15.7■□□□□ 0.1
CHEK1-204ENST00000438015 POLR3GLQ9BT43 218 aa15.7■□□□□ 0.1
CHEK1-204ENST00000438015 FAM50AQ14320 339 aaKnown RBP15.69■□□□□ 0.1
CHEK1-204ENST00000438015 CEP162Q5TB80 1403 aa15.64■□□□□ 0.09
CHEK1-204ENST00000438015 ANP32EQ9BTT0 268 aa15.62■□□□□ 0.09
CHEK1-204ENST00000438015 RB1CC1Q8TDY2 1594 aa15.61■□□□□ 0.09
CHEK1-204ENST00000438015 KCNH8Q96L42 1107 aa15.59■□□□□ 0.09
CHEK1-204ENST00000438015 BCL11AQ9H165 835 aa15.58■□□□□ 0.08
CHEK1-204ENST00000438015 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
CHEK1-204ENST00000438015 P3H3Q8IVL6 736 aa15.55■□□□□ 0.08
CHEK1-204ENST00000438015 SENP3-EIF4A1A0A087X0R7 540 aa15.55■□□□□ 0.08
CHEK1-204ENST00000438015 ANP32CO43423 234 aa15.55■□□□□ 0.08
CHEK1-204ENST00000438015 TSHZ2Q9NRE2 1034 aa15.55■□□□□ 0.08
CHEK1-204ENST00000438015 SOGA1O94964 1423 aa15.51■□□□□ 0.07
CHEK1-204ENST00000438015 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
CHEK1-204ENST00000438015 HNRNPUQ00839 825 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHEK1-204ENST00000438015 NBR1Q14596 966 aa15.48■□□□□ 0.07
CHEK1-204ENST00000438015 SIN3AQ96ST3 1273 aa15.41■□□□□ 0.06
CHEK1-204ENST00000438015 CLIP1P30622 1438 aa15.41■□□□□ 0.06
CHEK1-204ENST00000438015 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
CHEK1-204ENST00000438015 RBM19Q9Y4C8 960 aaKnown RBP15.39■□□□□ 0.05
CHEK1-204ENST00000438015 ABCC8Q09428 1581 aa15.38■□□□□ 0.05
CHEK1-204ENST00000438015 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
CHEK1-204ENST00000438015 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
CHEK1-204ENST00000438015 RTL5Q5HYW3 569 aaPredicted RBP15.36■□□□□ 0.05
CHEK1-204ENST00000438015 TNIKQ9UKE5 1360 aa15.35■□□□□ 0.05
CHEK1-204ENST00000438015 NPM2Q86SE8 214 aaKnown RBP15.35■□□□□ 0.05
CHEK1-204ENST00000438015 CLSPNQ9HAW4 1339 aa15.34■□□□□ 0.05
CHEK1-204ENST00000438015 ZNF326Q5BKZ1 582 aaKnown RBP15.32■□□□□ 0.04
CHEK1-204ENST00000438015 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
CHEK1-204ENST00000438015 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
CHEK1-204ENST00000438015 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
CHEK1-204ENST00000438015 SALL2Q9Y467 1007 aaPredicted RBP15.26■□□□□ 0.03
CHEK1-204ENST00000438015 GOLGA3Q08378 1498 aa15.24■□□□□ 0.03
CHEK1-204ENST00000438015 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
CHEK1-204ENST00000438015 B4GALNT3Q6L9W6 998 aa15.21■□□□□ 0.03
CHEK1-204ENST00000438015 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
CHEK1-204ENST00000438015 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
CHEK1-204ENST00000438015 DAXXQ9UER7 740 aaPredicted RBP15.17■□□□□ 0.02
CHEK1-204ENST00000438015 WIZO95785 1651 aa15.16■□□□□ 0.02
CHEK1-204ENST00000438015 WRNQ14191 1432 aaPredicted RBP eCLIP15.14■□□□□ 0.01
CHEK1-204ENST00000438015 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
CHEK1-204ENST00000438015 MRS2Q9HD23 443 aa15.14■□□□□ 0.01
CHEK1-204ENST00000438015 ANP32AP39687 249 aaKnown RBP15.13■□□□□ 0.01
CHEK1-204ENST00000438015 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
CHEK1-204ENST00000438015 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
CHEK1-204ENST00000438015 DEKP35659 375 aaKnown RBP15.09■□□□□ 0.01
CHEK1-204ENST00000438015 VPS8Q8N3P4 1428 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms