RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 DIP2BQ9P265 1576 aa32.47■■■□□ 2.79
YBX1-203ENST00000436427 PLCH2O75038 1416 aa32.47■■■□□ 2.79
YBX1-203ENST00000436427 TCOF1Q13428 1488 aaKnown RBP32.45■■■□□ 2.79
YBX1-203ENST00000436427 GLI2P10070 1586 aa32.44■■■□□ 2.78
YBX1-203ENST00000436427 FAM69CQ0P6D2 419 aa32.42■■■□□ 2.78
YBX1-203ENST00000436427 ZNF644Q9H582 1327 aaPredicted RBP32.42■■■□□ 2.78
YBX1-203ENST00000436427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.42■■■□□ 2.78
YBX1-203ENST00000436427 CD109Q6YHK3 1445 aa32.42■■■□□ 2.78
YBX1-203ENST00000436427 CAMSAP2Q08AD1 1489 aa32.41■■■□□ 2.78
YBX1-203ENST00000436427 ARAP3Q8WWN8 1544 aa32.39■■■□□ 2.78
YBX1-203ENST00000436427 ITGAEP38570 1179 aa32.39■■■□□ 2.78
YBX1-203ENST00000436427 EFCAB2Q5VUJ9 269 aa32.37■■■□□ 2.77
YBX1-203ENST00000436427 MAP3K4Q9Y6R4 1608 aa32.37■■■□□ 2.77
YBX1-203ENST00000436427 SAMD9LQ8IVG5 1584 aa32.35■■■□□ 2.77
YBX1-203ENST00000436427 FANCAO15360 1455 aa32.33■■■□□ 2.77
YBX1-203ENST00000436427 KIF13AQ9H1H9 1805 aa32.31■■■□□ 2.76
YBX1-203ENST00000436427 PLEKHH2Q8IVE3 1493 aa32.26■■■□□ 2.76
YBX1-203ENST00000436427 CFAP74Q9C0B2 1584 aa32.25■■■□□ 2.75
YBX1-203ENST00000436427 DNMT1P26358 1616 aaKnown RBP32.25■■■□□ 2.75
YBX1-203ENST00000436427 SYCP2Q9BX26 1530 aa32.25■■■□□ 2.75
YBX1-203ENST00000436427 HNRNPMP52272 730 aaKnown RBP eCLIP32.24■■■□□ 2.759e-7■■■■□ 23.6
YBX1-203ENST00000436427 DAPK1P53355 1430 aa32.23■■■□□ 2.75
YBX1-203ENST00000436427 ABCC1P33527 1531 aa32.22■■■□□ 2.75
YBX1-203ENST00000436427 TSPOAP1O95153 1857 aa32.22■■■□□ 2.75
YBX1-203ENST00000436427 KIAA1107Q9UPP5 1409 aa32.21■■■□□ 2.75
YBX1-203ENST00000436427 AKNAQ7Z591 1439 aa32.2■■■□□ 2.75
YBX1-203ENST00000436427 ABCC5O15440 1437 aa32.2■■■□□ 2.74
YBX1-203ENST00000436427 MBD5Q9P267 1494 aa32.19■■■□□ 2.74
YBX1-203ENST00000436427 PTPRKQ15262 1439 aa32.19■■■□□ 2.74
YBX1-203ENST00000436427 ARHGEF5Q12774 1597 aa32.18■■■□□ 2.74
YBX1-203ENST00000436427 ADGRL1O94910 1474 aa32.18■■■□□ 2.74
YBX1-203ENST00000436427 ARHGEF12Q9NZN5 1544 aa32.18■■■□□ 2.74
YBX1-203ENST00000436427 TRHP20396 242 aaPredicted RBP32.17■■■□□ 2.74
YBX1-203ENST00000436427 NEO1Q92859 1461 aa32.17■■■□□ 2.74
YBX1-203ENST00000436427 PPRC1Q5VV67 1664 aaKnown RBP32.16■■■□□ 2.74
YBX1-203ENST00000436427 CCDC141Q6ZP82 1450 aa32.15■■■□□ 2.74
YBX1-203ENST00000436427 CROCC2H7BZ55 1655 aa32.15■■■□□ 2.74
YBX1-203ENST00000436427 TEX14Q8IWB6 1497 aa32.14■■■□□ 2.74
YBX1-203ENST00000436427 CHIC2Q9UKJ5 165 aa32.14■■■□□ 2.74
YBX1-203ENST00000436427 RSPH4AQ5TD94 716 aa32.13■■■□□ 2.73
YBX1-203ENST00000436427 SCAPERQ9BY12 1400 aa32.13■■■□□ 2.73
YBX1-203ENST00000436427 TSPY4P0CV99 314 aa32.09■■■□□ 2.73
YBX1-203ENST00000436427 TSPY10P0CW01 314 aa32.09■■■□□ 2.73
YBX1-203ENST00000436427 TRAPPC8Q9Y2L5 1435 aa32.08■■■□□ 2.73
YBX1-203ENST00000436427 SHANK2Q9UPX8 1470 aa32.07■■■□□ 2.72
YBX1-203ENST00000436427 C9orf84Q5VXU9 1444 aa32.05■■■□□ 2.72
YBX1-203ENST00000436427 ADGBQ8N7X0 1667 aa32.02■■■□□ 2.72
YBX1-203ENST00000436427 AFAP1Q8N556 730 aa32.02■■■□□ 2.72
YBX1-203ENST00000436427 RRP7BPQ9NSQ0 103 aa32■■■□□ 2.71
YBX1-203ENST00000436427 ROCK1Q13464 1354 aa32■■■□□ 2.71
YBX1-203ENST00000436427 POGZQ7Z3K3 1410 aa31.99■■■□□ 2.71
YBX1-203ENST00000436427 ZNF518AQ6AHZ1 1483 aa31.99■■■□□ 2.71
YBX1-203ENST00000436427 DENND4BO75064 1496 aaPredicted RBP31.99■■■□□ 2.71
YBX1-203ENST00000436427 MAST1Q9Y2H9 1570 aa31.98■■■□□ 2.71
YBX1-203ENST00000436427 ADGRL2O95490 1459 aa31.97■■■□□ 2.71
YBX1-203ENST00000436427 HFM1A2PYH4 1435 aa31.96■■■□□ 2.71
YBX1-203ENST00000436427 ANKRD30AQ9BXX3 1397 aa31.96■■■□□ 2.71
YBX1-203ENST00000436427 SPAG9O60271 1321 aaKnown RBP31.96■■■□□ 2.71
YBX1-203ENST00000436427 NCOA1Q15788 1441 aa31.94■■■□□ 2.7
YBX1-203ENST00000436427 SETD5Q9C0A6 1442 aa31.94■■■□□ 2.7
YBX1-203ENST00000436427 RAPGEF3O95398 923 aa31.93■■■□□ 2.7
YBX1-203ENST00000436427 NAIPQ13075 1403 aa31.93■■■□□ 2.7
YBX1-203ENST00000436427 MYT1LQ9UL68 1186 aa31.91■■■□□ 2.7
YBX1-203ENST00000436427 GCC2Q8IWJ2 1684 aa31.91■■■□□ 2.7
YBX1-203ENST00000436427 RICTORQ6R327 1708 aa31.9■■■□□ 2.7
YBX1-203ENST00000436427 KDM5CP41229 1560 aa31.9■■■□□ 2.7
YBX1-203ENST00000436427 ZFYVE16Q7Z3T8 1539 aa31.9■■■□□ 2.7
YBX1-203ENST00000436427 RTEL1-TNFRSF6BF6WH68 1400 aa31.88■■■□□ 2.69
YBX1-203ENST00000436427 RAB3GAP2Q9H2M9 1393 aa31.88■■■□□ 2.69
YBX1-203ENST00000436427 INO80Q9ULG1 1556 aaPredicted RBP31.88■■■□□ 2.69
YBX1-203ENST00000436427 ATP7AQ04656 1500 aa31.87■■■□□ 2.69
YBX1-203ENST00000436427 PLXNC1O60486 1568 aa31.86■■■□□ 2.69
YBX1-203ENST00000436427 KIF15Q9NS87 1388 aa31.86■■■□□ 2.69
YBX1-203ENST00000436427 FRMPD1Q5SYB0 1578 aa31.85■■■□□ 2.69
YBX1-203ENST00000436427 HECW2Q9P2P5 1572 aa31.84■■■□□ 2.69
YBX1-203ENST00000436427 MLH3Q9UHC1 1453 aa31.81■■■□□ 2.68
YBX1-203ENST00000436427 KIDINS220Q9ULH0 1771 aa31.81■■■□□ 2.68
YBX1-203ENST00000436427 COL17A1Q9UMD9 1497 aaPredicted RBP31.8■■■□□ 2.68
YBX1-203ENST00000436427 KDM6BO15054 1643 aa31.78■■■□□ 2.68
YBX1-203ENST00000436427 ANKRD50Q9ULJ7 1429 aa31.76■■■□□ 2.68
YBX1-203ENST00000436427 ZMYM4Q5VZL5 1548 aa31.76■■■□□ 2.67
YBX1-203ENST00000436427 DUOX2Q9NRD8 1548 aa31.75■■■□□ 2.67
YBX1-203ENST00000436427 HRCP23327 699 aa31.72■■■□□ 2.67
YBX1-203ENST00000436427 ABCA6Q8N139 1617 aa31.7■■■□□ 2.66
YBX1-203ENST00000436427 MAGI2Q86UL8 1455 aa31.68■■■□□ 2.66
YBX1-203ENST00000436427 ERBINQ96RT1 1412 aa31.67■■■□□ 2.66
YBX1-203ENST00000436427 YEATS2Q9ULM3 1422 aa31.67■■■□□ 2.66
YBX1-203ENST00000436427 DIP2CQ9Y2E4 1556 aa31.65■■■□□ 2.66
YBX1-203ENST00000436427 A2MP01023 1474 aa31.63■■■□□ 2.65
YBX1-203ENST00000436427 DHX29Q7Z478 1369 aaKnown RBP31.63■■■□□ 2.65
YBX1-203ENST00000436427 TRIM52Q96A61 297 aa31.63■■■□□ 2.65
YBX1-203ENST00000436427 ACIN1Q9UKV3 1341 aaKnown RBP31.59■■■□□ 2.65
YBX1-203ENST00000436427 CCER1Q8TC90 406 aaPredicted RBP31.58■■■□□ 2.65
YBX1-203ENST00000436427 ARHGEF40Q8TER5 1519 aa31.56■■■□□ 2.64
YBX1-203ENST00000436427 EIF2AK4Q9P2K8 1649 aaKnown RBP31.55■■■□□ 2.64
YBX1-203ENST00000436427 ATP10AO60312 1499 aa31.55■■■□□ 2.64
YBX1-203ENST00000436427 DHX57Q6P158 1386 aaKnown RBP31.55■■■□□ 2.64
YBX1-203ENST00000436427 KIF3BO15066 747 aa31.52■■■□□ 2.64
YBX1-203ENST00000436427 UNC13BO14795 1591 aa31.51■■■□□ 2.63
YBX1-203ENST00000436427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.49■■■□□ 2.635e-10■□□□□ 8.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms