RNA–Protein interactions for RNA: ENST00000428210.5

XPO1-206, Transcript of exportin 1, humanhuman

TSL 2

Gene XPO1, Length 6,776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO1-206ENST00000428210 FRAT1Q92837 279 aaPredicted RBP17.42■□□□□ 0.38
XPO1-206ENST00000428210 KIF3BO15066 747 aa17.41■□□□□ 0.38
XPO1-206ENST00000428210 FGD5Q6ZNL6 1462 aa17.41■□□□□ 0.38
XPO1-206ENST00000428210 PNNQ9H307 717 aaKnown RBP17.41■□□□□ 0.38
XPO1-206ENST00000428210 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
XPO1-206ENST00000428210 CCER2I3L3R5 266 aa17.39■□□□□ 0.38
XPO1-206ENST00000428210 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
XPO1-206ENST00000428210 SOX12O15370 315 aa17.39■□□□□ 0.37
XPO1-206ENST00000428210 BECN1Q14457 450 aa17.39■□□□□ 0.37
XPO1-206ENST00000428210 KTN1Q86UP2 1357 aaKnown RBP17.38■□□□□ 0.37
XPO1-206ENST00000428210 PPP4R2Q9NY27 417 aa17.38■□□□□ 0.37
XPO1-206ENST00000428210 RSPH4AQ5TD94 716 aa17.37■□□□□ 0.37
XPO1-206ENST00000428210 RAD54L2Q9Y4B4 1467 aa17.36■□□□□ 0.37
XPO1-206ENST00000428210 GAPVD1Q14C86 1478 aa17.35■□□□□ 0.37
XPO1-206ENST00000428210 HDGFL2Q7Z4V5 671 aaPredicted RBP17.34■□□□□ 0.37
XPO1-206ENST00000428210 L3MBTL2Q969R5 705 aa17.33■□□□□ 0.37
XPO1-206ENST00000428210 PTPRGP23470 1445 aa17.33■□□□□ 0.36
XPO1-206ENST00000428210 CASC1Q6TDU7 716 aa17.32■□□□□ 0.36
XPO1-206ENST00000428210 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
XPO1-206ENST00000428210 IGF1RP08069 1367 aa17.32■□□□□ 0.36
XPO1-206ENST00000428210 MS4A1P11836 297 aa17.31■□□□□ 0.36
XPO1-206ENST00000428210 EIF3AQ14152 1382 aaKnown RBP17.31■□□□□ 0.36
XPO1-206ENST00000428210 RGS3P49796 1198 aa17.31■□□□□ 0.36
XPO1-206ENST00000428210 WASHC2CQ9Y4E1 1318 aa17.3■□□□□ 0.36
XPO1-206ENST00000428210 CHMP4BQ9H444 224 aaKnown RBP17.29■□□□□ 0.36
XPO1-206ENST00000428210 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.36
XPO1-206ENST00000428210 TRIM44Q96DX7 344 aaPredicted RBP17.27■□□□□ 0.36
XPO1-206ENST00000428210 RALBP1Q15311 655 aa17.27■□□□□ 0.35
XPO1-206ENST00000428210 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
XPO1-206ENST00000428210 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
XPO1-206ENST00000428210 NCLP19338 710 aaKnown RBP17.23■□□□□ 0.35
XPO1-206ENST00000428210 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
XPO1-206ENST00000428210 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
XPO1-206ENST00000428210 RTF1Q92541 710 aaKnown RBP17.22■□□□□ 0.35
XPO1-206ENST00000428210 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.352e-7■■■■□ 19.9
XPO1-206ENST00000428210 TULP1O00294 542 aaPredicted RBP17.21■□□□□ 0.35
XPO1-206ENST00000428210 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
XPO1-206ENST00000428210 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.355e-9■□□□□ 10
XPO1-206ENST00000428210 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
XPO1-206ENST00000428210 GOLGA6L22H0YM25 854 aa17.2■□□□□ 0.34
XPO1-206ENST00000428210 OSCARQ8IYS5 282 aa17.18■□□□□ 0.34
XPO1-206ENST00000428210 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
XPO1-206ENST00000428210 NPHP1O15259 732 aa17.17■□□□□ 0.34
XPO1-206ENST00000428210 KIF21BO75037 1637 aa17.16■□□□□ 0.34
XPO1-206ENST00000428210 PTMAP06454 111 aaKnown RBP17.16■□□□□ 0.34
XPO1-206ENST00000428210 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
XPO1-206ENST00000428210 TERF2IPQ9NYB0 399 aa17.16■□□□□ 0.34
XPO1-206ENST00000428210 DNTTIP2Q5QJE6 756 aaKnown RBP17.16■□□□□ 0.34
XPO1-206ENST00000428210 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
XPO1-206ENST00000428210 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
XPO1-206ENST00000428210 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
XPO1-206ENST00000428210 CUX1P39880 1505 aa17.13■□□□□ 0.33
XPO1-206ENST00000428210 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
XPO1-206ENST00000428210 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
XPO1-206ENST00000428210 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
XPO1-206ENST00000428210 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
XPO1-206ENST00000428210 CFTRP13569 1480 aa17.11■□□□□ 0.33
XPO1-206ENST00000428210 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
XPO1-206ENST00000428210 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
XPO1-206ENST00000428210 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
XPO1-206ENST00000428210 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
XPO1-206ENST00000428210 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
XPO1-206ENST00000428210 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
XPO1-206ENST00000428210 TPRNQ4KMQ1 711 aa17.1■□□□□ 0.33
XPO1-206ENST00000428210 GRIN2BQ13224 1484 aa17.09■□□□□ 0.33
XPO1-206ENST00000428210 NESP48681 1621 aa17.09■□□□□ 0.33
XPO1-206ENST00000428210 NLRP13Q86W25 1043 aa17.08■□□□□ 0.33
XPO1-206ENST00000428210 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.33
XPO1-206ENST00000428210 KIF15Q9NS87 1388 aa17.08■□□□□ 0.32
XPO1-206ENST00000428210 HSP90AB1P08238 724 aaKnown RBP17.08■□□□□ 0.32
XPO1-206ENST00000428210 NGDNQ8NEJ9 315 aaKnown RBP17.07■□□□□ 0.32
XPO1-206ENST00000428210 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
XPO1-206ENST00000428210 ZNF644Q9H582 1327 aaPredicted RBP17.07■□□□□ 0.32
XPO1-206ENST00000428210 CC2D2AQ9P2K1 1620 aa17.07■□□□□ 0.32
XPO1-206ENST00000428210 KCNJ4P48050 445 aa17.07■□□□□ 0.32
XPO1-206ENST00000428210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
XPO1-206ENST00000428210 CASKIN1Q8WXD9 1431 aa17.06■□□□□ 0.32
XPO1-206ENST00000428210 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
XPO1-206ENST00000428210 NUTM2FA1L443 756 aa17.05■□□□□ 0.32
XPO1-206ENST00000428210 PANK3Q9H999 370 aa17.05■□□□□ 0.32
XPO1-206ENST00000428210 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
XPO1-206ENST00000428210 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
XPO1-206ENST00000428210 ERICH3Q5RHP9 1530 aa17.05■□□□□ 0.32
XPO1-206ENST00000428210 MRC2Q9UBG0 1479 aa17.04■□□□□ 0.32
XPO1-206ENST00000428210 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
XPO1-206ENST00000428210 USP47Q96K76 1375 aa17.04■□□□□ 0.32
XPO1-206ENST00000428210 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
XPO1-206ENST00000428210 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
XPO1-206ENST00000428210 FGD1P98174 961 aa17.03■□□□□ 0.32
XPO1-206ENST00000428210 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
XPO1-206ENST00000428210 APBB1O00213 710 aa17.02■□□□□ 0.32
XPO1-206ENST00000428210 TAOK2Q9UL54 1235 aa17.02■□□□□ 0.32
XPO1-206ENST00000428210 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
XPO1-206ENST00000428210 NAP1L5Q96NT1 182 aaPredicted RBP17.02■□□□□ 0.32
XPO1-206ENST00000428210 HMGXB3Q12766 1538 aa17.02■□□□□ 0.31
XPO1-206ENST00000428210 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.31
XPO1-206ENST00000428210 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.31
XPO1-206ENST00000428210 AMPHP49418 695 aa17■□□□□ 0.31
XPO1-206ENST00000428210 ERICH6BQ5W0A0 696 aa17■□□□□ 0.31
XPO1-206ENST00000428210 HSCBQ8IWL3 235 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms