RNA–Protein interactions for RNA: ENST00000427214.5

DDX39B-207, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-207ENST00000427214 GOLGA3Q08378 1498 aa11.18□□□□□ -0.62
DDX39B-207ENST00000427214 PLB1Q6P1J6 1458 aa11.18□□□□□ -0.62
DDX39B-207ENST00000427214 P3H3Q8IVL6 736 aa11.16□□□□□ -0.62
DDX39B-207ENST00000427214 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
DDX39B-207ENST00000427214 ABCA8O94911 1581 aa11.14□□□□□ -0.63
DDX39B-207ENST00000427214 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
DDX39B-207ENST00000427214 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-207ENST00000427214 FARP1Q9Y4F1 1045 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-207ENST00000427214 EPRSP07814 1512 aaKnown RBP11.12□□□□□ -0.63
DDX39B-207ENST00000427214 TSPOAP1O95153 1857 aa11.12□□□□□ -0.63
DDX39B-207ENST00000427214 GLI2P10070 1586 aa11.11□□□□□ -0.63
DDX39B-207ENST00000427214 SAMD9Q5K651 1589 aa11.11□□□□□ -0.63
DDX39B-207ENST00000427214 KIF21BO75037 1637 aa11.1□□□□□ -0.63
DDX39B-207ENST00000427214 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
DDX39B-207ENST00000427214 WDR7Q9Y4E6 1490 aa11.09□□□□□ -0.63
DDX39B-207ENST00000427214 PPRC1Q5VV67 1664 aaKnown RBP11.08□□□□□ -0.64
DDX39B-207ENST00000427214 FHOD3Q2V2M9 1422 aa11.08□□□□□ -0.64
DDX39B-207ENST00000427214 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
DDX39B-207ENST00000427214 ATP10BO94823 1461 aa11.06□□□□□ -0.64
DDX39B-207ENST00000427214 KDM6BO15054 1643 aa11.06□□□□□ -0.64
DDX39B-207ENST00000427214 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
DDX39B-207ENST00000427214 MAP3K4Q9Y6R4 1608 aa11.06□□□□□ -0.64
DDX39B-207ENST00000427214 COL17A1Q9UMD9 1497 aaPredicted RBP11.05□□□□□ -0.64
DDX39B-207ENST00000427214 UBTFP17480 764 aaKnown RBP11.04□□□□□ -0.64
DDX39B-207ENST00000427214 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.64
DDX39B-207ENST00000427214 NUP153P49790 1475 aaKnown RBP11.02□□□□□ -0.65
DDX39B-207ENST00000427214 GABBR2O75899 941 aa11.02□□□□□ -0.65
DDX39B-207ENST00000427214 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
DDX39B-207ENST00000427214 CD109Q6YHK3 1445 aa11.01□□□□□ -0.65
DDX39B-207ENST00000427214 EFCAB5A4FU69 1503 aa11.01□□□□□ -0.65
DDX39B-207ENST00000427214 PROM2Q8N271 834 aa11.01□□□□□ -0.65
DDX39B-207ENST00000427214 TEX14Q8IWB6 1497 aa11□□□□□ -0.65
DDX39B-207ENST00000427214 MAGI3Q5TCQ9 1506 aa10.99□□□□□ -0.65
DDX39B-207ENST00000427214 CFAP43Q8NDM7 1665 aa10.98□□□□□ -0.65
DDX39B-207ENST00000427214 ARHGAP35Q9NRY4 1499 aa10.98□□□□□ -0.65
DDX39B-207ENST00000427214 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.65
DDX39B-207ENST00000427214 ABCA9Q8IUA7 1624 aa10.94□□□□□ -0.66
DDX39B-207ENST00000427214 CDK13Q14004 1512 aaKnown RBP10.94□□□□□ -0.66
DDX39B-207ENST00000427214 PLEKHD1A6NEE1 506 aa10.93□□□□□ -0.66
DDX39B-207ENST00000427214 FMN1Q68DA7 1419 aa10.92□□□□□ -0.66
DDX39B-207ENST00000427214 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
DDX39B-207ENST00000427214 ARAP3Q8WWN8 1544 aa10.9□□□□□ -0.66
DDX39B-207ENST00000427214 MNX1P50219 401 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-207ENST00000427214 ZRANB1Q9UGI0 708 aa10.89□□□□□ -0.67
DDX39B-207ENST00000427214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.89□□□□□ -0.67
DDX39B-207ENST00000427214 NEO1Q92859 1461 aa10.88□□□□□ -0.67
DDX39B-207ENST00000427214 HECW1Q76N89 1606 aa10.88□□□□□ -0.67
DDX39B-207ENST00000427214 RAPGEF3O95398 923 aa10.88□□□□□ -0.67
DDX39B-207ENST00000427214 CLCN6P51797 869 aa10.88□□□□□ -0.67
DDX39B-207ENST00000427214 ADGRL1O94910 1474 aa10.87□□□□□ -0.67
DDX39B-207ENST00000427214 TTC37Q6PGP7 1564 aa10.87□□□□□ -0.67
DDX39B-207ENST00000427214 PHLDB1Q86UU1 1377 aa10.87□□□□□ -0.67
DDX39B-207ENST00000427214 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
DDX39B-207ENST00000427214 CLIP1P30622 1438 aa10.85□□□□□ -0.67
DDX39B-207ENST00000427214 LRRIQ1Q96JM4 1722 aa10.84□□□□□ -0.67
DDX39B-207ENST00000427214 AKNAQ7Z591 1439 aa10.84□□□□□ -0.67
DDX39B-207ENST00000427214 CASKIN1Q8WXD9 1431 aa10.84□□□□□ -0.67
DDX39B-207ENST00000427214 PCF11O94913 1555 aaKnown RBP10.83□□□□□ -0.68
DDX39B-207ENST00000427214 FRMPD1Q5SYB0 1578 aa10.83□□□□□ -0.68
DDX39B-207ENST00000427214 FANCAO15360 1455 aa10.83□□□□□ -0.68
DDX39B-207ENST00000427214 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
DDX39B-207ENST00000427214 TROQ12816 1431 aaPredicted RBP10.83□□□□□ -0.68
DDX39B-207ENST00000427214 KIF14Q15058 1648 aa10.82□□□□□ -0.68
DDX39B-207ENST00000427214 PLCH2O75038 1416 aa10.82□□□□□ -0.68
DDX39B-207ENST00000427214 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-207ENST00000427214 DENND4BO75064 1496 aaPredicted RBP10.81□□□□□ -0.68
DDX39B-207ENST00000427214 CCDC18Q5T9S5 1454 aa10.79□□□□□ -0.68
DDX39B-207ENST00000427214 FYCO1Q9BQS8 1478 aa10.79□□□□□ -0.68
DDX39B-207ENST00000427214 CFAP74Q9C0B2 1584 aa10.78□□□□□ -0.68
DDX39B-207ENST00000427214 POTEIP0CG38 1075 aa10.78□□□□□ -0.68
DDX39B-207ENST00000427214 FKBP8Q14318 412 aa10.78□□□□□ -0.68
DDX39B-207ENST00000427214 RICTORQ6R327 1708 aa10.78□□□□□ -0.68
DDX39B-207ENST00000427214 SCAPERQ9BY12 1400 aa10.77□□□□□ -0.68
DDX39B-207ENST00000427214 EFCAB2Q5VUJ9 269 aa10.77□□□□□ -0.69
DDX39B-207ENST00000427214 CEP162Q5TB80 1403 aa10.76□□□□□ -0.69
DDX39B-207ENST00000427214 LOC105371045A0A1W2PR82 267 aa10.76□□□□□ -0.69
DDX39B-207ENST00000427214 POGZQ7Z3K3 1410 aa10.75□□□□□ -0.69
DDX39B-207ENST00000427214 YEATS2Q9ULM3 1422 aa10.75□□□□□ -0.69
DDX39B-207ENST00000427214 MYO5CQ9NQX4 1742 aa10.75□□□□□ -0.69
DDX39B-207ENST00000427214 ZMYM4Q5VZL5 1548 aa10.75□□□□□ -0.69
DDX39B-207ENST00000427214 ARHGEF40Q8TER5 1519 aa10.75□□□□□ -0.69
DDX39B-207ENST00000427214 MIER1Q8N108 512 aa10.75□□□□□ -0.69
DDX39B-207ENST00000427214 ARHGAP5Q13017 1502 aa10.74□□□□□ -0.69
DDX39B-207ENST00000427214 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
DDX39B-207ENST00000427214 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
DDX39B-207ENST00000427214 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
DDX39B-207ENST00000427214 ARID4BQ4LE39 1312 aaPredicted RBP10.73□□□□□ -0.69
DDX39B-207ENST00000427214 PLEKHG5O94827 1062 aa10.72□□□□□ -0.69
DDX39B-207ENST00000427214 AFAP1Q8N556 730 aa10.72□□□□□ -0.69
DDX39B-207ENST00000427214 MAGI2Q86UL8 1455 aa10.72□□□□□ -0.69
DDX39B-207ENST00000427214 ZFYVE16Q7Z3T8 1539 aa10.72□□□□□ -0.69
DDX39B-207ENST00000427214 ADAMTSL3P82987 1691 aa10.72□□□□□ -0.69
DDX39B-207ENST00000427214 SIGLEC1Q9BZZ2 1709 aa10.71□□□□□ -0.69
DDX39B-207ENST00000427214 ARHGEF12Q9NZN5 1544 aa10.71□□□□□ -0.69
DDX39B-207ENST00000427214 CDC42BPBQ9Y5S2 1711 aa10.71□□□□□ -0.69
DDX39B-207ENST00000427214 BCORL1Q5H9F3 1711 aa10.7□□□□□ -0.7
DDX39B-207ENST00000427214 PREX2Q70Z35 1606 aa10.7□□□□□ -0.7
DDX39B-207ENST00000427214 GPATCH8Q9UKJ3 1502 aaKnown RBP10.69□□□□□ -0.7
DDX39B-207ENST00000427214 PTPRMP28827 1452 aa10.69□□□□□ -0.7
DDX39B-207ENST00000427214 TRAPPC8Q9Y2L5 1435 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms