RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 PLB1Q6P1J6 1458 aa18.5■□□□□ 0.55
MCF2L-213ENST00000421756 IQGAP2Q13576 1575 aa18.49■□□□□ 0.55
MCF2L-213ENST00000421756 KDM6BO15054 1643 aa18.48■□□□□ 0.55
MCF2L-213ENST00000421756 LRRIQ1Q96JM4 1722 aa18.48■□□□□ 0.55
MCF2L-213ENST00000421756 SUPT6HQ7KZ85 1726 aaKnown RBP18.48■□□□□ 0.55
MCF2L-213ENST00000421756 MYT1LQ9UL68 1186 aa18.46■□□□□ 0.55
MCF2L-213ENST00000421756 EHBP1L1Q8N3D4 1523 aa18.46■□□□□ 0.55
MCF2L-213ENST00000421756 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
MCF2L-213ENST00000421756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.542e-7■■□□□ 13.3
MCF2L-213ENST00000421756 TSPY4P0CV99 314 aa18.45■□□□□ 0.54
MCF2L-213ENST00000421756 TSPY10P0CW01 314 aa18.45■□□□□ 0.54
MCF2L-213ENST00000421756 SAMD9Q5K651 1589 aa18.43■□□□□ 0.54
MCF2L-213ENST00000421756 CCER2I3L3R5 266 aa18.43■□□□□ 0.54
MCF2L-213ENST00000421756 UGGT2Q9NYU1 1516 aa18.42■□□□□ 0.54
MCF2L-213ENST00000421756 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
MCF2L-213ENST00000421756 ABCC5O15440 1437 aa18.39■□□□□ 0.53
MCF2L-213ENST00000421756 NUP155O75694 1391 aa18.39■□□□□ 0.53
MCF2L-213ENST00000421756 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-213ENST00000421756 DAPK1P53355 1430 aa18.38■□□□□ 0.53
MCF2L-213ENST00000421756 NUP153P49790 1475 aaKnown RBP18.37■□□□□ 0.53
MCF2L-213ENST00000421756 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
MCF2L-213ENST00000421756 HECW1Q76N89 1606 aa18.36■□□□□ 0.53
MCF2L-213ENST00000421756 IFT140Q96RY7 1462 aa18.36■□□□□ 0.53
MCF2L-213ENST00000421756 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
MCF2L-213ENST00000421756 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-213ENST00000421756 DENND4BO75064 1496 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-213ENST00000421756 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
MCF2L-213ENST00000421756 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
MCF2L-213ENST00000421756 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
MCF2L-213ENST00000421756 KIAA0586Q9BVV6 1533 aa18.34■□□□□ 0.53
MCF2L-213ENST00000421756 PBRM1Q86U86 1689 aa18.34■□□□□ 0.53
MCF2L-213ENST00000421756 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
MCF2L-213ENST00000421756 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
MCF2L-213ENST00000421756 WDR62O43379 1518 aa18.3■□□□□ 0.52
MCF2L-213ENST00000421756 CCDC7Q96M83 1385 aa18.29■□□□□ 0.52
MCF2L-213ENST00000421756 ST20-MTHFSA0A0A6YYL1 179 aa18.29■□□□□ 0.52
MCF2L-213ENST00000421756 CARMIL2Q6F5E8 1435 aa18.28■□□□□ 0.52
MCF2L-213ENST00000421756 MIA2Q96PC5 1412 aa18.28■□□□□ 0.52
MCF2L-213ENST00000421756 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
MCF2L-213ENST00000421756 TROQ12816 1431 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-213ENST00000421756 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
MCF2L-213ENST00000421756 ANKRD30AQ9BXX3 1397 aa18.25■□□□□ 0.51
MCF2L-213ENST00000421756 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
MCF2L-213ENST00000421756 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
MCF2L-213ENST00000421756 CAMSAP2Q08AD1 1489 aa18.23■□□□□ 0.51
MCF2L-213ENST00000421756 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
MCF2L-213ENST00000421756 KIAA0556O60303 1618 aa18.22■□□□□ 0.51
MCF2L-213ENST00000421756 USP47Q96K76 1375 aa18.22■□□□□ 0.51
MCF2L-213ENST00000421756 PTPRGP23470 1445 aa18.22■□□□□ 0.51
MCF2L-213ENST00000421756 NCOA1Q15788 1441 aa18.22■□□□□ 0.51
MCF2L-213ENST00000421756 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
MCF2L-213ENST00000421756 TCOF1Q13428 1488 aaKnown RBP18.21■□□□□ 0.51
MCF2L-213ENST00000421756 GPATCH8Q9UKJ3 1502 aaKnown RBP18.21■□□□□ 0.51
MCF2L-213ENST00000421756 CC2D1BQ5T0F9 858 aaKnown RBP18.2■□□□□ 0.5
MCF2L-213ENST00000421756 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
MCF2L-213ENST00000421756 CNTLNQ9NXG0 1405 aa18.19■□□□□ 0.5
MCF2L-213ENST00000421756 KIF14Q15058 1648 aa18.19■□□□□ 0.5
MCF2L-213ENST00000421756 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
MCF2L-213ENST00000421756 AKNAQ7Z591 1439 aa18.17■□□□□ 0.5
MCF2L-213ENST00000421756 KIF15Q9NS87 1388 aa18.17■□□□□ 0.5
MCF2L-213ENST00000421756 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
MCF2L-213ENST00000421756 CEP170Q5SW79 1584 aa18.16■□□□□ 0.5
MCF2L-213ENST00000421756 RPRD2Q5VT52 1461 aaKnown RBP18.15■□□□□ 0.5
MCF2L-213ENST00000421756 ATP10BO94823 1461 aa18.13■□□□□ 0.49
MCF2L-213ENST00000421756 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
MCF2L-213ENST00000421756 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
MCF2L-213ENST00000421756 PZPP20742 1482 aa18.11■□□□□ 0.49
MCF2L-213ENST00000421756 ROCK2O75116 1388 aaKnown RBP18.11■□□□□ 0.49
MCF2L-213ENST00000421756 AFAP1Q8N556 730 aa18.11■□□□□ 0.49
MCF2L-213ENST00000421756 KIAA1107Q9UPP5 1409 aa18.11■□□□□ 0.49
MCF2L-213ENST00000421756 CHGAP10645 457 aaKnown RBP18.1■□□□□ 0.49
MCF2L-213ENST00000421756 MAGI1Q96QZ7 1491 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-213ENST00000421756 TEX14Q8IWB6 1497 aa18.06■□□□□ 0.48
MCF2L-213ENST00000421756 ERICH6Q7L0X2 663 aa18.06■□□□□ 0.48
MCF2L-213ENST00000421756 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
MCF2L-213ENST00000421756 GCC2Q8IWJ2 1684 aa18.04■□□□□ 0.48
MCF2L-213ENST00000421756 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
MCF2L-213ENST00000421756 PPP4R2Q9NY27 417 aa18.01■□□□□ 0.47
MCF2L-213ENST00000421756 ZBED9Q6R2W3 1325 aa17.99■□□□□ 0.47
MCF2L-213ENST00000421756 NUTM2DQ5VT03 806 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-213ENST00000421756 PANK3Q9H999 370 aa17.98■□□□□ 0.47
MCF2L-213ENST00000421756 CCDC144AA2RUR9 1427 aa17.98■□□□□ 0.47
MCF2L-213ENST00000421756 CDCA7LQ96GN5 454 aa17.97■□□□□ 0.47
MCF2L-213ENST00000421756 ANP32EQ9BTT0 268 aa17.97■□□□□ 0.47
MCF2L-213ENST00000421756 NUP160Q12769 1436 aa17.97■□□□□ 0.47
MCF2L-213ENST00000421756 SPATA31E1Q6ZUB1 1445 aa17.97■□□□□ 0.47
MCF2L-213ENST00000421756 PLIN1O60240 522 aa17.97■□□□□ 0.47
MCF2L-213ENST00000421756 ARHGAP5Q13017 1502 aa17.96■□□□□ 0.47
MCF2L-213ENST00000421756 NPM2Q86SE8 214 aaKnown RBP17.96■□□□□ 0.47
MCF2L-213ENST00000421756 KIF3BO15066 747 aa17.95■□□□□ 0.46
MCF2L-213ENST00000421756 PNISRQ8TF01 805 aaKnown RBP17.95■□□□□ 0.46
MCF2L-213ENST00000421756 TNNT2P45379 298 aaPredicted RBP17.94■□□□□ 0.46
MCF2L-213ENST00000421756 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
MCF2L-213ENST00000421756 EFCAB2Q5VUJ9 269 aa17.94■□□□□ 0.46
MCF2L-213ENST00000421756 DHX29Q7Z478 1369 aaKnown RBP17.93■□□□□ 0.46
MCF2L-213ENST00000421756 SKAP1Q86WV1 359 aa17.93■□□□□ 0.46
MCF2L-213ENST00000421756 MSH5O43196 834 aa17.93■□□□□ 0.46
MCF2L-213ENST00000421756 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
MCF2L-213ENST00000421756 ERCC6L2Q5T890 1561 aa17.92■□□□□ 0.46
MCF2L-213ENST00000421756 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms