RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 CEP170Q5SW79 1584 aa12.5□□□□□ -0.41
RBM39-209ENST00000416529 SHROOM2Q13796 1616 aa12.49□□□□□ -0.41
RBM39-209ENST00000416529 CTTNBP2Q8WZ74 1663 aa12.48□□□□□ -0.41
RBM39-209ENST00000416529 IQGAP2Q13576 1575 aa12.47□□□□□ -0.41
RBM39-209ENST00000416529 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
RBM39-209ENST00000416529 JPH4Q96JJ6 628 aa12.47□□□□□ -0.41
RBM39-209ENST00000416529 CARMIL2Q6F5E8 1435 aa12.46□□□□□ -0.41
RBM39-209ENST00000416529 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
RBM39-209ENST00000416529 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.42
RBM39-209ENST00000416529 MS4A3Q96HJ5 214 aa12.45□□□□□ -0.42
RBM39-209ENST00000416529 TNIKQ9UKE5 1360 aa12.43□□□□□ -0.42
RBM39-209ENST00000416529 FAM212AQ96EL1 285 aa12.43□□□□□ -0.42
RBM39-209ENST00000416529 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
RBM39-209ENST00000416529 EFCAB5A4FU69 1503 aa12.41□□□□□ -0.42
RBM39-209ENST00000416529 UBTFP17480 764 aaKnown RBP12.4□□□□□ -0.42
RBM39-209ENST00000416529 NUBP1P53384 320 aa12.4□□□□□ -0.42
RBM39-209ENST00000416529 PRG4Q92954 1404 aaPredicted RBP12.39□□□□□ -0.43
RBM39-209ENST00000416529 ASTLQ6HA08 431 aaPredicted RBP12.39□□□□□ -0.43
RBM39-209ENST00000416529 SGIP1Q9BQI5 828 aa12.39□□□□□ -0.43
RBM39-209ENST00000416529 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
RBM39-209ENST00000416529 SLC39A7Q92504 469 aa12.35□□□□□ -0.43
RBM39-209ENST00000416529 MAP3K13O43283 966 aa12.34□□□□□ -0.43
RBM39-209ENST00000416529 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
RBM39-209ENST00000416529 KIAA0556O60303 1618 aa12.33□□□□□ -0.43
RBM39-209ENST00000416529 DISP1Q96F81 1524 aa12.33□□□□□ -0.44
RBM39-209ENST00000416529 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
RBM39-209ENST00000416529 C7P10643 843 aa12.33□□□□□ -0.44
RBM39-209ENST00000416529 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
RBM39-209ENST00000416529 PTPRGP23470 1445 aa12.31□□□□□ -0.44
RBM39-209ENST00000416529 TIE1P35590 1138 aa12.31□□□□□ -0.44
RBM39-209ENST00000416529 FMN1Q68DA7 1419 aa12.3□□□□□ -0.44
RBM39-209ENST00000416529 UHRF1BP1LA0JNW5 1464 aa12.3□□□□□ -0.44
RBM39-209ENST00000416529 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
RBM39-209ENST00000416529 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
RBM39-209ENST00000416529 METRNQ9UJH8 293 aa12.27□□□□□ -0.45
RBM39-209ENST00000416529 CLIP1P30622 1438 aa12.27□□□□□ -0.45
RBM39-209ENST00000416529 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
RBM39-209ENST00000416529 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
RBM39-209ENST00000416529 GSE1Q14687 1217 aa12.25□□□□□ -0.45
RBM39-209ENST00000416529 ARHGAP35Q9NRY4 1499 aa12.24□□□□□ -0.45
RBM39-209ENST00000416529 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
RBM39-209ENST00000416529 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
RBM39-209ENST00000416529 ATN1P54259 1190 aaPredicted RBP12.23□□□□□ -0.45
RBM39-209ENST00000416529 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
RBM39-209ENST00000416529 ABCC2Q92887 1545 aa12.21□□□□□ -0.45
RBM39-209ENST00000416529 ABCA8O94911 1581 aa12.21□□□□□ -0.46
RBM39-209ENST00000416529 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
RBM39-209ENST00000416529 KDM5BQ9UGL1 1544 aa12.19□□□□□ -0.46
RBM39-209ENST00000416529 TTLL13PA6NNM8 815 aa12.18□□□□□ -0.46
RBM39-209ENST00000416529 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
RBM39-209ENST00000416529 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
RBM39-209ENST00000416529 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
RBM39-209ENST00000416529 FHOD3Q2V2M9 1422 aa12.17□□□□□ -0.46
RBM39-209ENST00000416529 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
RBM39-209ENST00000416529 FYCO1Q9BQS8 1478 aa12.16□□□□□ -0.46
RBM39-209ENST00000416529 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
RBM39-209ENST00000416529 IER5LQ5T953 404 aa12.16□□□□□ -0.46
RBM39-209ENST00000416529 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
RBM39-209ENST00000416529 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
RBM39-209ENST00000416529 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
RBM39-209ENST00000416529 CCDC18Q5T9S5 1454 aa12.15□□□□□ -0.46
RBM39-209ENST00000416529 HECW1Q76N89 1606 aa12.15□□□□□ -0.47
RBM39-209ENST00000416529 PLB1Q6P1J6 1458 aa12.14□□□□□ -0.47
RBM39-209ENST00000416529 PYGBP11216 843 aa12.14□□□□□ -0.47
RBM39-209ENST00000416529 SPOCK2Q92563 424 aa12.14□□□□□ -0.47
RBM39-209ENST00000416529 ADCY10Q96PN6 1610 aa12.14□□□□□ -0.47
RBM39-209ENST00000416529 VPS8Q8N3P4 1428 aa12.13□□□□□ -0.47
RBM39-209ENST00000416529 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
RBM39-209ENST00000416529 KIF13AQ9H1H9 1805 aa12.13□□□□□ -0.47
RBM39-209ENST00000416529 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
RBM39-209ENST00000416529 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
RBM39-209ENST00000416529 SEC24BO95487 1268 aa12.12□□□□□ -0.47
RBM39-209ENST00000416529 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
RBM39-209ENST00000416529 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
RBM39-209ENST00000416529 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
RBM39-209ENST00000416529 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
RBM39-209ENST00000416529 TRIM35Q9UPQ4 493 aa12.11□□□□□ -0.47
RBM39-209ENST00000416529 NUP153P49790 1475 aaKnown RBP12.1□□□□□ -0.47
RBM39-209ENST00000416529 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
RBM39-209ENST00000416529 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
RBM39-209ENST00000416529 ATP10BO94823 1461 aa12.08□□□□□ -0.47
RBM39-209ENST00000416529 PLEKHD1A6NEE1 506 aa12.08□□□□□ -0.48
RBM39-209ENST00000416529 EPRSP07814 1512 aaKnown RBP12.07□□□□□ -0.48
RBM39-209ENST00000416529 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
RBM39-209ENST00000416529 IFNLR1Q8IU57 520 aaPredicted RBP12.07□□□□□ -0.48
RBM39-209ENST00000416529 ZCCHC11Q5TAX3 1644 aaKnown RBP12.06□□□□□ -0.48
RBM39-209ENST00000416529 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
RBM39-209ENST00000416529 GLI2P10070 1586 aa12.05□□□□□ -0.48
RBM39-209ENST00000416529 KDM6BO15054 1643 aa12.05□□□□□ -0.48
RBM39-209ENST00000416529 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
RBM39-209ENST00000416529 WDR7Q9Y4E6 1490 aa12.05□□□□□ -0.48
RBM39-209ENST00000416529 ASXL2Q76L83 1435 aa12.04□□□□□ -0.48
RBM39-209ENST00000416529 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
RBM39-209ENST00000416529 TTBK1Q5TCY1 1321 aaPredicted RBP12.04□□□□□ -0.48
RBM39-209ENST00000416529 PCF11O94913 1555 aaKnown RBP12.03□□□□□ -0.48
RBM39-209ENST00000416529 PHLDB1Q86UU1 1377 aa12.02□□□□□ -0.49
RBM39-209ENST00000416529 TROQ12816 1431 aaPredicted RBP12.02□□□□□ -0.49
RBM39-209ENST00000416529 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
RBM39-209ENST00000416529 PCDHB8Q9UN66 801 aa12.01□□□□□ -0.49
RBM39-209ENST00000416529 PLCG2P16885 1265 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms