RNA–Protein interactions for RNA: ENST00000416195.1

SP3-202, Transcript of Sp3 transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SP3, Length 3,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-202ENST00000416195 UACAQ9BZF9 1416 aa16.04■□□□□ 0.16
SP3-202ENST00000416195 EPRSP07814 1512 aaKnown RBP16.03■□□□□ 0.16
SP3-202ENST00000416195 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.16
SP3-202ENST00000416195 HFM1A2PYH4 1435 aa16.01■□□□□ 0.15
SP3-202ENST00000416195 TMC1Q8TDI8 760 aa16■□□□□ 0.15
SP3-202ENST00000416195 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
SP3-202ENST00000416195 TIMELESSQ9UNS1 1208 aa16■□□□□ 0.15
SP3-202ENST00000416195 CARMIL2Q6F5E8 1435 aa15.97■□□□□ 0.15
SP3-202ENST00000416195 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
SP3-202ENST00000416195 CC2D1BQ5T0F9 858 aaKnown RBP15.97■□□□□ 0.15
SP3-202ENST00000416195 CUL7Q14999 1698 aa15.96■□□□□ 0.15
SP3-202ENST00000416195 IQGAP2Q13576 1575 aa15.96■□□□□ 0.15
SP3-202ENST00000416195 B4GALNT3Q6L9W6 998 aa15.96■□□□□ 0.15
SP3-202ENST00000416195 ST20-MTHFSA0A0A6YYL1 179 aa15.95■□□□□ 0.14
SP3-202ENST00000416195 PTPRGP23470 1445 aa15.94■□□□□ 0.14
SP3-202ENST00000416195 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
SP3-202ENST00000416195 TSHZ2Q9NRE2 1034 aa15.92■□□□□ 0.14
SP3-202ENST00000416195 PTPN23Q9H3S7 1636 aa15.92■□□□□ 0.14
SP3-202ENST00000416195 KIF7Q2M1P5 1343 aa15.91■□□□□ 0.14
SP3-202ENST00000416195 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
SP3-202ENST00000416195 MAP3K1Q13233 1512 aa15.9■□□□□ 0.14
SP3-202ENST00000416195 EHBP1L1Q8N3D4 1523 aa15.9■□□□□ 0.14
SP3-202ENST00000416195 ANKRD30AQ9BXX3 1397 aa15.9■□□□□ 0.14
SP3-202ENST00000416195 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
SP3-202ENST00000416195 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
SP3-202ENST00000416195 NUTM2DQ5VT03 806 aaPredicted RBP15.89■□□□□ 0.13
SP3-202ENST00000416195 CTTNBP2Q8WZ74 1663 aa15.89■□□□□ 0.13
SP3-202ENST00000416195 SUPT6HQ7KZ85 1726 aaKnown RBP15.89■□□□□ 0.13
SP3-202ENST00000416195 GRIN2AQ12879 1464 aa15.89■□□□□ 0.13
SP3-202ENST00000416195 ABCC5O15440 1437 aa15.88■□□□□ 0.13
SP3-202ENST00000416195 DAPK1P53355 1430 aa15.88■□□□□ 0.13
SP3-202ENST00000416195 AFAP1Q8N556 730 aa15.88■□□□□ 0.13
SP3-202ENST00000416195 NBPF1Q3BBV0 1214 aa15.87■□□□□ 0.13
SP3-202ENST00000416195 ARHGEF11O15085 1522 aa15.87■□□□□ 0.13
SP3-202ENST00000416195 KIAA0586Q9BVV6 1533 aa15.87■□□□□ 0.13
SP3-202ENST00000416195 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
SP3-202ENST00000416195 NUP153P49790 1475 aaKnown RBP15.85■□□□□ 0.13
SP3-202ENST00000416195 TNNT2P45379 298 aaPredicted RBP15.85■□□□□ 0.13
SP3-202ENST00000416195 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
SP3-202ENST00000416195 SLC24A1O60721 1099 aa15.84■□□□□ 0.13
SP3-202ENST00000416195 ANKRD50Q9ULJ7 1429 aa15.84■□□□□ 0.13
SP3-202ENST00000416195 KDM6BO15054 1643 aa15.84■□□□□ 0.13
SP3-202ENST00000416195 USP47Q96K76 1375 aa15.83■□□□□ 0.12
SP3-202ENST00000416195 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
SP3-202ENST00000416195 HECW1Q76N89 1606 aa15.83■□□□□ 0.12
SP3-202ENST00000416195 CCDC7Q96M83 1385 aa15.82■□□□□ 0.12
SP3-202ENST00000416195 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
SP3-202ENST00000416195 GGT6Q6P531 493 aa15.81■□□□□ 0.12
SP3-202ENST00000416195 SAFB2Q14151 953 aaKnown RBP eCLIP15.81■□□□□ 0.12
SP3-202ENST00000416195 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
SP3-202ENST00000416195 ROCK2O75116 1388 aaKnown RBP15.81■□□□□ 0.12
SP3-202ENST00000416195 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
SP3-202ENST00000416195 KIF3BO15066 747 aa15.8■□□□□ 0.12
SP3-202ENST00000416195 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
SP3-202ENST00000416195 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.79■□□□□ 0.12
SP3-202ENST00000416195 NPM1P06748 294 aaKnown RBP eCLIP15.79■□□□□ 0.12
SP3-202ENST00000416195 DISP1Q96F81 1524 aa15.79■□□□□ 0.12
SP3-202ENST00000416195 ANKRD30BQ9BXX2 1392 aa15.78■□□□□ 0.12
SP3-202ENST00000416195 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
SP3-202ENST00000416195 ADAMTS12P58397 1594 aa15.77■□□□□ 0.12
SP3-202ENST00000416195 CAMSAP2Q08AD1 1489 aa15.76■□□□□ 0.11
SP3-202ENST00000416195 MIA2Q96PC5 1412 aa15.75■□□□□ 0.11
SP3-202ENST00000416195 CCDC136Q96JN2 1154 aa15.75■□□□□ 0.11
SP3-202ENST00000416195 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
SP3-202ENST00000416195 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
SP3-202ENST00000416195 SYNJ2O15056 1496 aa15.74■□□□□ 0.11
SP3-202ENST00000416195 EFCAB2Q5VUJ9 269 aa15.74■□□□□ 0.11
SP3-202ENST00000416195 NCOA1Q15788 1441 aa15.74■□□□□ 0.11
SP3-202ENST00000416195 EIF4G3O43432 1585 aaKnown RBP15.74■□□□□ 0.11
SP3-202ENST00000416195 C9orf84Q5VXU9 1444 aa15.74■□□□□ 0.11
SP3-202ENST00000416195 NEUROD2Q15784 382 aa15.73■□□□□ 0.11
SP3-202ENST00000416195 GPATCH8Q9UKJ3 1502 aaKnown RBP15.73■□□□□ 0.11
SP3-202ENST00000416195 WDR62O43379 1518 aa15.72■□□□□ 0.11
SP3-202ENST00000416195 PBRM1Q86U86 1689 aa15.72■□□□□ 0.11
SP3-202ENST00000416195 ANO8Q9HCE9 1232 aaPredicted RBP15.72■□□□□ 0.11
SP3-202ENST00000416195 SPAG9O60271 1321 aaKnown RBP15.71■□□□□ 0.11
SP3-202ENST00000416195 LRRIQ1Q96JM4 1722 aa15.69■□□□□ 0.1
SP3-202ENST00000416195 ATP10BO94823 1461 aa15.69■□□□□ 0.1
SP3-202ENST00000416195 CNTLNQ9NXG0 1405 aa15.69■□□□□ 0.1
SP3-202ENST00000416195 PANK3Q9H999 370 aa15.69■□□□□ 0.1
SP3-202ENST00000416195 MLECQ14165 292 aa15.69■□□□□ 0.1
SP3-202ENST00000416195 PLIN1O60240 522 aa15.68■□□□□ 0.1
SP3-202ENST00000416195 CCDC144AA2RUR9 1427 aa15.68■□□□□ 0.1
SP3-202ENST00000416195 KIAA0556O60303 1618 aa15.68■□□□□ 0.1
SP3-202ENST00000416195 MAGI1Q96QZ7 1491 aaPredicted RBP15.67■□□□□ 0.1
SP3-202ENST00000416195 KIF14Q15058 1648 aa15.66■□□□□ 0.1
SP3-202ENST00000416195 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
SP3-202ENST00000416195 KIAA1107Q9UPP5 1409 aa15.66■□□□□ 0.1
SP3-202ENST00000416195 ARHGAP5Q13017 1502 aa15.66■□□□□ 0.1
SP3-202ENST00000416195 CCDC146Q8IYE0 955 aa15.66■□□□□ 0.1
SP3-202ENST00000416195 STK26Q9P289 416 aa15.65■□□□□ 0.1
SP3-202ENST00000416195 RAPGEF6Q8TEU7 1601 aa15.65■□□□□ 0.1
SP3-202ENST00000416195 KNSTRNQ9Y448 316 aa15.64■□□□□ 0.1
SP3-202ENST00000416195 DENND4BO75064 1496 aaPredicted RBP15.64■□□□□ 0.09
SP3-202ENST00000416195 CEP170Q5SW79 1584 aa15.63■□□□□ 0.09
SP3-202ENST00000416195 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
SP3-202ENST00000416195 WDR43Q15061 677 aaKnown RBP eCLIP15.62■□□□□ 0.09
SP3-202ENST00000416195 NBR1Q14596 966 aa15.62■□□□□ 0.09
SP3-202ENST00000416195 TRAK1Q9UPV9 953 aa15.62■□□□□ 0.09
SP3-202ENST00000416195 RPRD2Q5VT52 1461 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms