RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 TMC1Q8TDI8 760 aa19■□□□□ 0.63
AC239798.2-201ENST00000415338 MAP3K1Q13233 1512 aa18.99■□□□□ 0.63
AC239798.2-201ENST00000415338 CCER2I3L3R5 266 aa18.98■□□□□ 0.63
AC239798.2-201ENST00000415338 TSHZ2Q9NRE2 1034 aa18.98■□□□□ 0.63
AC239798.2-201ENST00000415338 PLB1Q6P1J6 1458 aa18.98■□□□□ 0.63
AC239798.2-201ENST00000415338 CHGAP10645 457 aaKnown RBP18.96■□□□□ 0.63
AC239798.2-201ENST00000415338 THOC2Q8NI27 1593 aaKnown RBP18.95■□□□□ 0.62
AC239798.2-201ENST00000415338 B4GALNT3Q6L9W6 998 aa18.95■□□□□ 0.62
AC239798.2-201ENST00000415338 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
AC239798.2-201ENST00000415338 CARMIL2Q6F5E8 1435 aa18.94■□□□□ 0.62
AC239798.2-201ENST00000415338 PTPN23Q9H3S7 1636 aa18.92■□□□□ 0.62
AC239798.2-201ENST00000415338 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
AC239798.2-201ENST00000415338 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
AC239798.2-201ENST00000415338 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
AC239798.2-201ENST00000415338 MAGI3Q5TCQ9 1506 aa18.91■□□□□ 0.62
AC239798.2-201ENST00000415338 ST20-MTHFSA0A0A6YYL1 179 aa18.89■□□□□ 0.61
AC239798.2-201ENST00000415338 CC2D1BQ5T0F9 858 aaKnown RBP18.89■□□□□ 0.61
AC239798.2-201ENST00000415338 PRKRIP1Q9H875 184 aaPredicted RBP18.89■□□□□ 0.61
AC239798.2-201ENST00000415338 CFAP43Q8NDM7 1665 aa18.89■□□□□ 0.61
AC239798.2-201ENST00000415338 KIF7Q2M1P5 1343 aa18.88■□□□□ 0.61
AC239798.2-201ENST00000415338 ANKRD30AQ9BXX3 1397 aa18.87■□□□□ 0.61
AC239798.2-201ENST00000415338 MYT1Q01538 1121 aa18.85■□□□□ 0.61
AC239798.2-201ENST00000415338 IFT140Q96RY7 1462 aa18.85■□□□□ 0.61
AC239798.2-201ENST00000415338 DAPK1P53355 1430 aa18.85■□□□□ 0.61
AC239798.2-201ENST00000415338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
AC239798.2-201ENST00000415338 PTPRGP23470 1445 aa18.84■□□□□ 0.61
AC239798.2-201ENST00000415338 ABCC5O15440 1437 aa18.83■□□□□ 0.61
AC239798.2-201ENST00000415338 HECW1Q76N89 1606 aa18.83■□□□□ 0.6
AC239798.2-201ENST00000415338 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
AC239798.2-201ENST00000415338 KIAA0586Q9BVV6 1533 aa18.81■□□□□ 0.6
AC239798.2-201ENST00000415338 GRIN2AQ12879 1464 aa18.81■□□□□ 0.6
AC239798.2-201ENST00000415338 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
AC239798.2-201ENST00000415338 USP47Q96K76 1375 aa18.8■□□□□ 0.6
AC239798.2-201ENST00000415338 UGGT2Q9NYU1 1516 aa18.79■□□□□ 0.6
AC239798.2-201ENST00000415338 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
AC239798.2-201ENST00000415338 RBM19Q9Y4C8 960 aaKnown RBP18.78■□□□□ 0.6
AC239798.2-201ENST00000415338 NUP153P49790 1475 aaKnown RBP18.78■□□□□ 0.6
AC239798.2-201ENST00000415338 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
AC239798.2-201ENST00000415338 KDM6BO15054 1643 aa18.76■□□□□ 0.59
AC239798.2-201ENST00000415338 TROQ12816 1431 aaPredicted RBP18.76■□□□□ 0.59
AC239798.2-201ENST00000415338 NBPF1Q3BBV0 1214 aa18.76■□□□□ 0.59
AC239798.2-201ENST00000415338 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
AC239798.2-201ENST00000415338 ROCK2O75116 1388 aaKnown RBP18.76■□□□□ 0.59
AC239798.2-201ENST00000415338 KIF15Q9NS87 1388 aa18.76■□□□□ 0.59
AC239798.2-201ENST00000415338 MIA2Q96PC5 1412 aa18.75■□□□□ 0.59
AC239798.2-201ENST00000415338 ANKRD30BQ9BXX2 1392 aa18.75■□□□□ 0.59
AC239798.2-201ENST00000415338 NPM2Q86SE8 214 aaKnown RBP18.74■□□□□ 0.59
AC239798.2-201ENST00000415338 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
AC239798.2-201ENST00000415338 SAMD9Q5K651 1589 aa18.72■□□□□ 0.59
AC239798.2-201ENST00000415338 ADAMTS12P58397 1594 aa18.71■□□□□ 0.59
AC239798.2-201ENST00000415338 AFAP1Q8N556 730 aa18.71■□□□□ 0.59
AC239798.2-201ENST00000415338 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
AC239798.2-201ENST00000415338 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
AC239798.2-201ENST00000415338 DISP1Q96F81 1524 aa18.69■□□□□ 0.58
AC239798.2-201ENST00000415338 CNTLNQ9NXG0 1405 aa18.69■□□□□ 0.58
AC239798.2-201ENST00000415338 NUTM2DQ5VT03 806 aaPredicted RBP18.68■□□□□ 0.58
AC239798.2-201ENST00000415338 NCOA1Q15788 1441 aa18.67■□□□□ 0.58
AC239798.2-201ENST00000415338 WDR62O43379 1518 aa18.67■□□□□ 0.58
AC239798.2-201ENST00000415338 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
AC239798.2-201ENST00000415338 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
AC239798.2-201ENST00000415338 KIF3BO15066 747 aa18.65■□□□□ 0.58
AC239798.2-201ENST00000415338 SYNJ2O15056 1496 aa18.64■□□□□ 0.58
AC239798.2-201ENST00000415338 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.58
AC239798.2-201ENST00000415338 GGT6Q6P531 493 aa18.63■□□□□ 0.57
AC239798.2-201ENST00000415338 NPM1P06748 294 aaKnown RBP eCLIP18.63■□□□□ 0.57
AC239798.2-201ENST00000415338 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
AC239798.2-201ENST00000415338 PPP4R2Q9NY27 417 aa18.63■□□□□ 0.57
AC239798.2-201ENST00000415338 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
AC239798.2-201ENST00000415338 EIF4G3O43432 1585 aaKnown RBP18.62■□□□□ 0.57
AC239798.2-201ENST00000415338 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
AC239798.2-201ENST00000415338 PLPPR3Q6T4P5 718 aa18.61■□□□□ 0.57
AC239798.2-201ENST00000415338 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
AC239798.2-201ENST00000415338 KIAA1107Q9UPP5 1409 aa18.61■□□□□ 0.57
AC239798.2-201ENST00000415338 KIAA0556O60303 1618 aa18.6■□□□□ 0.57
AC239798.2-201ENST00000415338 CCDC144AA2RUR9 1427 aa18.6■□□□□ 0.57
AC239798.2-201ENST00000415338 NEUROD2Q15784 382 aa18.59■□□□□ 0.57
AC239798.2-201ENST00000415338 PANK3Q9H999 370 aa18.59■□□□□ 0.57
AC239798.2-201ENST00000415338 RAPGEF6Q8TEU7 1601 aa18.58■□□□□ 0.57
AC239798.2-201ENST00000415338 SPAG9O60271 1321 aaKnown RBP18.58■□□□□ 0.57
AC239798.2-201ENST00000415338 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.56
AC239798.2-201ENST00000415338 NBR1Q14596 966 aa18.58■□□□□ 0.56
AC239798.2-201ENST00000415338 BCL11AQ9H165 835 aa18.57■□□□□ 0.56
AC239798.2-201ENST00000415338 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
AC239798.2-201ENST00000415338 ROCK1Q13464 1354 aa18.57■□□□□ 0.56
AC239798.2-201ENST00000415338 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
AC239798.2-201ENST00000415338 ATP10BO94823 1461 aa18.57■□□□□ 0.56
AC239798.2-201ENST00000415338 PLIN1O60240 522 aa18.56■□□□□ 0.56
AC239798.2-201ENST00000415338 WDR43Q15061 677 aaKnown RBP eCLIP18.56■□□□□ 0.56
AC239798.2-201ENST00000415338 KIF14Q15058 1648 aa18.55■□□□□ 0.56
AC239798.2-201ENST00000415338 TCOF1Q13428 1488 aaKnown RBP18.55■□□□□ 0.56
AC239798.2-201ENST00000415338 DENND4BO75064 1496 aaPredicted RBP18.55■□□□□ 0.56
AC239798.2-201ENST00000415338 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
AC239798.2-201ENST00000415338 TMF1P82094 1093 aa18.54■□□□□ 0.56
AC239798.2-201ENST00000415338 ZBED9Q6R2W3 1325 aa18.53■□□□□ 0.56
AC239798.2-201ENST00000415338 ANP32EQ9BTT0 268 aa18.53■□□□□ 0.56
AC239798.2-201ENST00000415338 CCDC146Q8IYE0 955 aa18.52■□□□□ 0.55
AC239798.2-201ENST00000415338 CDCA7LQ96GN5 454 aa18.52■□□□□ 0.55
AC239798.2-201ENST00000415338 CEP170Q5SW79 1584 aa18.5■□□□□ 0.55
AC239798.2-201ENST00000415338 NUDCQ9Y266 331 aa18.5■□□□□ 0.55
AC239798.2-201ENST00000415338 KTN1Q86UP2 1357 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms