RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
AC239798.2-201ENST00000415338 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
AC239798.2-201ENST00000415338 SHROOM4Q9ULL8 1493 aa24.93■■□□□ 1.58
AC239798.2-201ENST00000415338 SUPT5HO00267 1087 aaKnown RBP24.55■■□□□ 1.52
AC239798.2-201ENST00000415338 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
AC239798.2-201ENST00000415338 ZCCHC6Q5VYS8 1495 aaKnown RBP23.03■■□□□ 1.28
AC239798.2-201ENST00000415338 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
AC239798.2-201ENST00000415338 FAM9AQ8IZU1 332 aaPredicted RBP22.95■■□□□ 1.26
AC239798.2-201ENST00000415338 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
AC239798.2-201ENST00000415338 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
AC239798.2-201ENST00000415338 CCDC180Q9P1Z9 1646 aa22.74■■□□□ 1.23
AC239798.2-201ENST00000415338 ABCC9O60706 1549 aa22.67■■□□□ 1.22
AC239798.2-201ENST00000415338 MYO15BQ96JP2 1530 aa22.54■■□□□ 1.2
AC239798.2-201ENST00000415338 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
AC239798.2-201ENST00000415338 TTBK1Q5TCY1 1321 aaPredicted RBP22.4■■□□□ 1.18
AC239798.2-201ENST00000415338 PPARGC1BQ86YN6 1023 aaKnown RBP22.4■■□□□ 1.18
AC239798.2-201ENST00000415338 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
AC239798.2-201ENST00000415338 PABPN1Q86U42 306 aaKnown RBP eCLIP22.15■■□□□ 1.14
AC239798.2-201ENST00000415338 HRCP23327 699 aa22.13■■□□□ 1.13
AC239798.2-201ENST00000415338 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
AC239798.2-201ENST00000415338 RSF1Q96T23 1441 aaPredicted RBP21.96■■□□□ 1.11
AC239798.2-201ENST00000415338 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.09
AC239798.2-201ENST00000415338 DCAF1Q9Y4B6 1507 aa21.87■■□□□ 1.09
AC239798.2-201ENST00000415338 CECR2Q9BXF3 1484 aa21.86■■□□□ 1.09
AC239798.2-201ENST00000415338 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
AC239798.2-201ENST00000415338 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
AC239798.2-201ENST00000415338 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
AC239798.2-201ENST00000415338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.57■■□□□ 1.04
AC239798.2-201ENST00000415338 CCER1Q8TC90 406 aaPredicted RBP21.56■■□□□ 1.04
AC239798.2-201ENST00000415338 NACADO15069 1562 aa21.45■■□□□ 1.02
AC239798.2-201ENST00000415338 WIZO95785 1651 aa21.4■■□□□ 1.02
AC239798.2-201ENST00000415338 APLP2Q06481 763 aa21.32■■□□□ 1
AC239798.2-201ENST00000415338 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
AC239798.2-201ENST00000415338 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
AC239798.2-201ENST00000415338 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
AC239798.2-201ENST00000415338 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
AC239798.2-201ENST00000415338 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
AC239798.2-201ENST00000415338 SOGA1O94964 1423 aa21.12■□□□□ 0.97
AC239798.2-201ENST00000415338 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
AC239798.2-201ENST00000415338 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
AC239798.2-201ENST00000415338 ITGAEP38570 1179 aa21.08■□□□□ 0.97
AC239798.2-201ENST00000415338 YTHDC1Q96MU7 727 aaKnown RBP21■□□□□ 0.95
AC239798.2-201ENST00000415338 RUSC2Q8N2Y8 1516 aa20.96■□□□□ 0.95
AC239798.2-201ENST00000415338 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
AC239798.2-201ENST00000415338 SMARCA4P51532 1647 aa20.86■□□□□ 0.93
AC239798.2-201ENST00000415338 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
AC239798.2-201ENST00000415338 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
AC239798.2-201ENST00000415338 P3H3Q8IVL6 736 aa20.81■□□□□ 0.92
AC239798.2-201ENST00000415338 DIEXFQ68CQ4 756 aaKnown RBP20.8■□□□□ 0.92
AC239798.2-201ENST00000415338 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
AC239798.2-201ENST00000415338 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
AC239798.2-201ENST00000415338 CLIP1P30622 1438 aa20.66■□□□□ 0.9
AC239798.2-201ENST00000415338 TNIKQ9UKE5 1360 aa20.66■□□□□ 0.9
AC239798.2-201ENST00000415338 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
AC239798.2-201ENST00000415338 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
AC239798.2-201ENST00000415338 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
AC239798.2-201ENST00000415338 FAM50AQ14320 339 aaKnown RBP20.54■□□□□ 0.88
AC239798.2-201ENST00000415338 CENPBP07199 599 aaPredicted RBP20.53■□□□□ 0.88
AC239798.2-201ENST00000415338 BICRAQ9NZM4 1560 aa20.51■□□□□ 0.87
AC239798.2-201ENST00000415338 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
AC239798.2-201ENST00000415338 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
AC239798.2-201ENST00000415338 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
AC239798.2-201ENST00000415338 EEA1Q15075 1411 aa20.47■□□□□ 0.87
AC239798.2-201ENST00000415338 ZNF316A6NFI3 1004 aaPredicted RBP20.47■□□□□ 0.87
AC239798.2-201ENST00000415338 CEP164Q9UPV0 1460 aa20.46■□□□□ 0.87
AC239798.2-201ENST00000415338 NEUROD1Q13562 356 aa20.45■□□□□ 0.86
AC239798.2-201ENST00000415338 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
AC239798.2-201ENST00000415338 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
AC239798.2-201ENST00000415338 SYNJ1O43426 1573 aa20.4■□□□□ 0.86
AC239798.2-201ENST00000415338 MIER1Q8N108 512 aa20.32■□□□□ 0.84
AC239798.2-201ENST00000415338 ACIN1Q9UKV3 1341 aaKnown RBP20.31■□□□□ 0.84
AC239798.2-201ENST00000415338 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
AC239798.2-201ENST00000415338 VPS8Q8N3P4 1428 aa20.26■□□□□ 0.83
AC239798.2-201ENST00000415338 KIF27Q86VH2 1401 aa20.26■□□□□ 0.83
AC239798.2-201ENST00000415338 HIRIP3Q9BW71 556 aaPredicted RBP20.25■□□□□ 0.83
AC239798.2-201ENST00000415338 CUX2O14529 1486 aa20.23■□□□□ 0.83
AC239798.2-201ENST00000415338 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
AC239798.2-201ENST00000415338 DNAJC5BQ9UF47 199 aa20.14■□□□□ 0.81
AC239798.2-201ENST00000415338 FBLN2P98095 1184 aa20.12■□□□□ 0.81
AC239798.2-201ENST00000415338 CARMIL1Q5VZK9 1371 aa20.09■□□□□ 0.81
AC239798.2-201ENST00000415338 SIN3AQ96ST3 1273 aa20.08■□□□□ 0.81
AC239798.2-201ENST00000415338 CHIC2Q9UKJ5 165 aa20.08■□□□□ 0.8
AC239798.2-201ENST00000415338 KIF21BO75037 1637 aa20.04■□□□□ 0.8
AC239798.2-201ENST00000415338 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
AC239798.2-201ENST00000415338 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
AC239798.2-201ENST00000415338 TRIM52Q96A61 297 aa20.02■□□□□ 0.8
AC239798.2-201ENST00000415338 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
AC239798.2-201ENST00000415338 CUX1P39880 1505 aa20.01■□□□□ 0.79
AC239798.2-201ENST00000415338 ARAP1Q96P48 1450 aa19.99■□□□□ 0.79
AC239798.2-201ENST00000415338 DDX10Q13206 875 aaKnown RBP19.99■□□□□ 0.79
AC239798.2-201ENST00000415338 CCNB3Q8WWL7 1395 aa19.97■□□□□ 0.79
AC239798.2-201ENST00000415338 IGF1RP08069 1367 aa19.96■□□□□ 0.79
AC239798.2-201ENST00000415338 RAD54L2Q9Y4B4 1467 aa19.96■□□□□ 0.79
AC239798.2-201ENST00000415338 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
AC239798.2-201ENST00000415338 NESP48681 1621 aa19.95■□□□□ 0.78
AC239798.2-201ENST00000415338 BCANQ96GW7 911 aa19.95■□□□□ 0.78
AC239798.2-201ENST00000415338 PEG3Q9GZU2 1588 aa19.94■□□□□ 0.78
AC239798.2-201ENST00000415338 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
AC239798.2-201ENST00000415338 FHOD3Q2V2M9 1422 aa19.92■□□□□ 0.78
AC239798.2-201ENST00000415338 RRP7BPQ9NSQ0 103 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms