RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 PIP4K2BP78356 416 aa16.12■□□□□ 0.17
AC003087.1-201ENST00000412828 SETD1BQ9UPS6 1966 aaKnown RBP16.11■□□□□ 0.17
AC003087.1-201ENST00000412828 TOM1O60784 492 aa16.1■□□□□ 0.17
AC003087.1-201ENST00000412828 ATP10BO94823 1461 aa16.1■□□□□ 0.17
AC003087.1-201ENST00000412828 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
AC003087.1-201ENST00000412828 ARID3CA6NKF2 412 aa16.06■□□□□ 0.16
AC003087.1-201ENST00000412828 RGS17Q9UGC6 210 aaPredicted RBP16.06■□□□□ 0.16
AC003087.1-201ENST00000412828 ATP10AO60312 1499 aa16.03■□□□□ 0.16
AC003087.1-201ENST00000412828 TRAPPC8Q9Y2L5 1435 aa16.03■□□□□ 0.16
AC003087.1-201ENST00000412828 FAM9AQ8IZU1 332 aaPredicted RBP16.03■□□□□ 0.16
AC003087.1-201ENST00000412828 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.16
AC003087.1-201ENST00000412828 CFAP74Q9C0B2 1584 aa16.02■□□□□ 0.16
AC003087.1-201ENST00000412828 CAMSAP1Q5T5Y3 1602 aa16.01■□□□□ 0.15
AC003087.1-201ENST00000412828 HECW1Q76N89 1606 aa16.01■□□□□ 0.15
AC003087.1-201ENST00000412828 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
AC003087.1-201ENST00000412828 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
AC003087.1-201ENST00000412828 PKD2Q13563 968 aa15.97■□□□□ 0.15
AC003087.1-201ENST00000412828 C3P01024 1663 aa15.96■□□□□ 0.15
AC003087.1-201ENST00000412828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
AC003087.1-201ENST00000412828 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
AC003087.1-201ENST00000412828 ESF1Q9H501 851 aaKnown RBP15.93■□□□□ 0.14
AC003087.1-201ENST00000412828 PTPRKQ15262 1439 aa15.93■□□□□ 0.14
AC003087.1-201ENST00000412828 POTEAQ6S8J7 498 aa15.91■□□□□ 0.14
AC003087.1-201ENST00000412828 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
AC003087.1-201ENST00000412828 PLA2R1Q13018 1463 aa15.91■□□□□ 0.14
AC003087.1-201ENST00000412828 CPS1P31327 1500 aa15.9■□□□□ 0.14
AC003087.1-201ENST00000412828 SCAPERQ9BY12 1400 aa15.9■□□□□ 0.14
AC003087.1-201ENST00000412828 TCOF1Q13428 1488 aaKnown RBP15.88■□□□□ 0.13
AC003087.1-201ENST00000412828 NPATQ14207 1427 aa15.86■□□□□ 0.13
AC003087.1-201ENST00000412828 CTTNBP2Q8WZ74 1663 aa15.85■□□□□ 0.13
AC003087.1-201ENST00000412828 PLEKHD1A6NEE1 506 aa15.84■□□□□ 0.13
AC003087.1-201ENST00000412828 CNTLNQ9NXG0 1405 aa15.84■□□□□ 0.13
AC003087.1-201ENST00000412828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.84■□□□□ 0.13
AC003087.1-201ENST00000412828 ALKQ9UM73 1620 aa15.83■□□□□ 0.13
AC003087.1-201ENST00000412828 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.12
AC003087.1-201ENST00000412828 UPF1Q92900 1129 aaKnown RBP eCLIP15.82■□□□□ 0.12
AC003087.1-201ENST00000412828 AGLP35573 1532 aa15.82■□□□□ 0.12
AC003087.1-201ENST00000412828 SHANK2Q9UPX8 1470 aa15.81■□□□□ 0.12
AC003087.1-201ENST00000412828 REREQ9P2R6 1566 aa15.8■□□□□ 0.12
AC003087.1-201ENST00000412828 RAPGEF6Q8TEU7 1601 aa15.79■□□□□ 0.12
AC003087.1-201ENST00000412828 SETD1AO15047 1707 aaKnown RBP15.78■□□□□ 0.12
AC003087.1-201ENST00000412828 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
AC003087.1-201ENST00000412828 ZNF518AQ6AHZ1 1483 aa15.76■□□□□ 0.11
AC003087.1-201ENST00000412828 ZNF142P52746 1687 aaPredicted RBP15.76■□□□□ 0.11
AC003087.1-201ENST00000412828 PLCH2O75038 1416 aa15.76■□□□□ 0.11
AC003087.1-201ENST00000412828 NUP153P49790 1475 aaKnown RBP15.75■□□□□ 0.11
AC003087.1-201ENST00000412828 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
AC003087.1-201ENST00000412828 MYT1LQ9UL68 1186 aa15.74■□□□□ 0.11
AC003087.1-201ENST00000412828 DIP2CQ9Y2E4 1556 aa15.74■□□□□ 0.11
AC003087.1-201ENST00000412828 ZMYM3Q14202 1370 aa15.74■□□□□ 0.11
AC003087.1-201ENST00000412828 CEP170BQ9Y4F5 1589 aaPredicted RBP15.73■□□□□ 0.11
AC003087.1-201ENST00000412828 SUPT6HQ7KZ85 1726 aaKnown RBP15.72■□□□□ 0.11
AC003087.1-201ENST00000412828 EFCAB2Q5VUJ9 269 aa15.71■□□□□ 0.11
AC003087.1-201ENST00000412828 AFAP1Q8N556 730 aa15.71■□□□□ 0.11
AC003087.1-201ENST00000412828 MYO3AQ8NEV4 1616 aa15.71■□□□□ 0.11
AC003087.1-201ENST00000412828 KDM5CP41229 1560 aa15.7■□□□□ 0.1
AC003087.1-201ENST00000412828 MROH2AA6NES4 1674 aa15.7■□□□□ 0.1
AC003087.1-201ENST00000412828 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
AC003087.1-201ENST00000412828 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
AC003087.1-201ENST00000412828 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
AC003087.1-201ENST00000412828 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
AC003087.1-201ENST00000412828 RNF17Q9BXT8 1623 aaKnown RBP15.64■□□□□ 0.09
AC003087.1-201ENST00000412828 NEURL4Q96JN8 1562 aa15.62■□□□□ 0.09
AC003087.1-201ENST00000412828 A2ML1A8K2U0 1454 aa15.61■□□□□ 0.09
AC003087.1-201ENST00000412828 POLR1AO95602 1720 aaPredicted RBP15.6■□□□□ 0.09
AC003087.1-201ENST00000412828 LRRC7Q96NW7 1537 aa15.6■□□□□ 0.09
AC003087.1-201ENST00000412828 DNMT1P26358 1616 aaKnown RBP15.6■□□□□ 0.09
AC003087.1-201ENST00000412828 SAMD9Q5K651 1589 aa15.59■□□□□ 0.09
AC003087.1-201ENST00000412828 ANKLE2Q86XL3 938 aa15.57■□□□□ 0.08
AC003087.1-201ENST00000412828 TRIM52Q96A61 297 aa15.56■□□□□ 0.08
AC003087.1-201ENST00000412828 FAM135BQ49AJ0 1406 aa15.56■□□□□ 0.08
AC003087.1-201ENST00000412828 SYNMO15061 1565 aa15.55■□□□□ 0.08
AC003087.1-201ENST00000412828 MYO5CQ9NQX4 1742 aa15.54■□□□□ 0.08
AC003087.1-201ENST00000412828 MED14O60244 1454 aa15.52■□□□□ 0.08
AC003087.1-201ENST00000412828 NPHP4O75161 1426 aaPredicted RBP15.52■□□□□ 0.08
AC003087.1-201ENST00000412828 CLTCQ00610 1675 aaKnown RBP15.52■□□□□ 0.08
AC003087.1-201ENST00000412828 PRXQ9BXM0 1461 aa15.52■□□□□ 0.07
AC003087.1-201ENST00000412828 FOXD1Q16676 465 aa15.51■□□□□ 0.07
AC003087.1-201ENST00000412828 ZNF772Q68DY9 489 aaPredicted RBP15.51■□□□□ 0.07
AC003087.1-201ENST00000412828 ARHGAP5Q13017 1502 aa15.51■□□□□ 0.07
AC003087.1-201ENST00000412828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.49■□□□□ 0.07
AC003087.1-201ENST00000412828 DEPDC5O75140 1603 aa15.47■□□□□ 0.07
AC003087.1-201ENST00000412828 STRCP1A6NGW2 1772 aa15.47■□□□□ 0.07
AC003087.1-201ENST00000412828 RXRBP28702 533 aa15.47■□□□□ 0.07
AC003087.1-201ENST00000412828 THEMISQ8N1K5 641 aaPredicted RBP15.47■□□□□ 0.07
AC003087.1-201ENST00000412828 ZRANB1Q9UGI0 708 aa15.47■□□□□ 0.07
AC003087.1-201ENST00000412828 KIDINS220Q9ULH0 1771 aa15.47■□□□□ 0.07
AC003087.1-201ENST00000412828 CDK12Q9NYV4 1490 aaPredicted RBP15.46■□□□□ 0.06
AC003087.1-201ENST00000412828 CDK13Q14004 1512 aaKnown RBP15.44■□□□□ 0.06
AC003087.1-201ENST00000412828 ABCC1P33527 1531 aa15.43■□□□□ 0.06
AC003087.1-201ENST00000412828 JCADQ9P266 1359 aa15.43■□□□□ 0.06
AC003087.1-201ENST00000412828 IQGAP1P46940 1657 aa15.43■□□□□ 0.06
AC003087.1-201ENST00000412828 GGT6Q6P531 493 aa15.42■□□□□ 0.06
AC003087.1-201ENST00000412828 TNRQ92752 1358 aa15.41■□□□□ 0.06
AC003087.1-201ENST00000412828 IFFO2Q5TF58 517 aa15.39■□□□□ 0.05
AC003087.1-201ENST00000412828 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
AC003087.1-201ENST00000412828 RBM33Q96EV2 1170 aaKnown RBP15.39■□□□□ 0.05
AC003087.1-201ENST00000412828 CDK11AQ9UQ88 783 aaPredicted RBP15.39■□□□□ 0.05
AC003087.1-201ENST00000412828 SETBP1Q9Y6X0 1596 aa15.39■□□□□ 0.05
AC003087.1-201ENST00000412828 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms