RNA–Protein interactions for RNA: ENST00000412055.5

PRRT3-203, Transcript of proline rich transmembrane protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRRT3, Length 3,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3-203ENST00000412055 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
PRRT3-203ENST00000412055 IPO9Q96P70 1041 aaKnown RBP18.52■□□□□ 0.56
PRRT3-203ENST00000412055 ZNF644Q9H582 1327 aaPredicted RBP18.51■□□□□ 0.55
PRRT3-203ENST00000412055 FYCO1Q9BQS8 1478 aa18.5■□□□□ 0.55
PRRT3-203ENST00000412055 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
PRRT3-203ENST00000412055 NCOA2Q15596 1464 aa18.49■□□□□ 0.55
PRRT3-203ENST00000412055 PKD2Q13563 968 aa18.48■□□□□ 0.55
PRRT3-203ENST00000412055 CANXP27824 592 aaKnown RBP18.47■□□□□ 0.55
PRRT3-203ENST00000412055 PRKRIP1Q9H875 184 aaPredicted RBP18.47■□□□□ 0.55
PRRT3-203ENST00000412055 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
PRRT3-203ENST00000412055 CC2D1BQ5T0F9 858 aaKnown RBP18.46■□□□□ 0.55
PRRT3-203ENST00000412055 SPRYD3Q8NCJ5 442 aa18.46■□□□□ 0.55
PRRT3-203ENST00000412055 EXOC6Q8TAG9 804 aa18.46■□□□□ 0.55
PRRT3-203ENST00000412055 ABCA10Q8WWZ4 1543 aa18.46■□□□□ 0.55
PRRT3-203ENST00000412055 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
PRRT3-203ENST00000412055 UACAQ9BZF9 1416 aa18.46■□□□□ 0.55
PRRT3-203ENST00000412055 CARD11Q9BXL7 1154 aa18.46■□□□□ 0.55
PRRT3-203ENST00000412055 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
PRRT3-203ENST00000412055 BRPF3Q9ULD4 1205 aa18.43■□□□□ 0.54
PRRT3-203ENST00000412055 C11orf95C9JLR9 678 aaPredicted RBP18.43■□□□□ 0.54
PRRT3-203ENST00000412055 JPH4Q96JJ6 628 aa18.4■□□□□ 0.54
PRRT3-203ENST00000412055 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
PRRT3-203ENST00000412055 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
PRRT3-203ENST00000412055 EFCAB5A4FU69 1503 aa18.39■□□□□ 0.53
PRRT3-203ENST00000412055 MAP3K1Q13233 1512 aa18.39■□□□□ 0.53
PRRT3-203ENST00000412055 HFM1A2PYH4 1435 aa18.36■□□□□ 0.53
PRRT3-203ENST00000412055 MAPKBP1O60336 1514 aa18.36■□□□□ 0.53
PRRT3-203ENST00000412055 URB2Q14146 1524 aaKnown RBP18.36■□□□□ 0.53
PRRT3-203ENST00000412055 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
PRRT3-203ENST00000412055 SLKQ9H2G2 1235 aaPredicted RBP18.35■□□□□ 0.53
PRRT3-203ENST00000412055 NAIPQ13075 1403 aa18.34■□□□□ 0.53
PRRT3-203ENST00000412055 NUDCQ9Y266 331 aa18.34■□□□□ 0.53
PRRT3-203ENST00000412055 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
PRRT3-203ENST00000412055 PDE4AP27815 886 aa18.34■□□□□ 0.53
PRRT3-203ENST00000412055 HNRNPMP52272 730 aaKnown RBP eCLIP18.34■□□□□ 0.53
PRRT3-203ENST00000412055 NUP155O75694 1391 aa18.33■□□□□ 0.53
PRRT3-203ENST00000412055 GZF1Q9H116 711 aaPredicted RBP18.32■□□□□ 0.52
PRRT3-203ENST00000412055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.52
PRRT3-203ENST00000412055 RCAN3Q9UKA8 241 aa18.31■□□□□ 0.52
PRRT3-203ENST00000412055 PTPRKQ15262 1439 aa18.31■□□□□ 0.52
PRRT3-203ENST00000412055 LAMC3Q9Y6N6 1575 aa18.28■□□□□ 0.52
PRRT3-203ENST00000412055 CARMIL2Q6F5E8 1435 aa18.28■□□□□ 0.52
PRRT3-203ENST00000412055 PPM1GO15355 546 aaPredicted RBP18.28■□□□□ 0.52
PRRT3-203ENST00000412055 CDCA7LQ96GN5 454 aa18.27■□□□□ 0.52
PRRT3-203ENST00000412055 ANKRD30AQ9BXX3 1397 aa18.27■□□□□ 0.52
PRRT3-203ENST00000412055 MRC2Q9UBG0 1479 aa18.27■□□□□ 0.51
PRRT3-203ENST00000412055 NPM1P06748 294 aaKnown RBP eCLIP18.27■□□□□ 0.51
PRRT3-203ENST00000412055 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
PRRT3-203ENST00000412055 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
PRRT3-203ENST00000412055 CDK13Q14004 1512 aaKnown RBP18.24■□□□□ 0.51
PRRT3-203ENST00000412055 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
PRRT3-203ENST00000412055 KIF7Q2M1P5 1343 aa18.24■□□□□ 0.51
PRRT3-203ENST00000412055 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
PRRT3-203ENST00000412055 NAP1L5Q96NT1 182 aaPredicted RBP18.24■□□□□ 0.51
PRRT3-203ENST00000412055 ST20-MTHFSA0A0A6YYL1 179 aa18.23■□□□□ 0.51
PRRT3-203ENST00000412055 FRAT1Q92837 279 aaPredicted RBP18.23■□□□□ 0.51
PRRT3-203ENST00000412055 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRRT3-203ENST00000412055 ARID3AQ99856 593 aa18.21■□□□□ 0.51
PRRT3-203ENST00000412055 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
PRRT3-203ENST00000412055 CCDC7Q96M83 1385 aa18.2■□□□□ 0.5
PRRT3-203ENST00000412055 CUL7Q14999 1698 aa18.2■□□□□ 0.5
PRRT3-203ENST00000412055 EPRSP07814 1512 aaKnown RBP18.19■□□□□ 0.5
PRRT3-203ENST00000412055 ZNF608Q9ULD9 1512 aaPredicted RBP18.19■□□□□ 0.5
PRRT3-203ENST00000412055 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
PRRT3-203ENST00000412055 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
PRRT3-203ENST00000412055 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
PRRT3-203ENST00000412055 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
PRRT3-203ENST00000412055 ZBTB7CA1YPR0 619 aa18.17■□□□□ 0.5
PRRT3-203ENST00000412055 DDRGK1Q96HY6 314 aa18.17■□□□□ 0.5
PRRT3-203ENST00000412055 SNAPC4Q5SXM2 1469 aa18.16■□□□□ 0.5
PRRT3-203ENST00000412055 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
PRRT3-203ENST00000412055 USP47Q96K76 1375 aa18.15■□□□□ 0.5
PRRT3-203ENST00000412055 SUPT6HQ7KZ85 1726 aaKnown RBP18.15■□□□□ 0.5
PRRT3-203ENST00000412055 GSE1Q14687 1217 aa18.15■□□□□ 0.5
PRRT3-203ENST00000412055 CCDC146Q8IYE0 955 aa18.15■□□□□ 0.5
PRRT3-203ENST00000412055 MIA2Q96PC5 1412 aa18.14■□□□□ 0.5
PRRT3-203ENST00000412055 TCERG1O14776 1098 aaKnown RBP18.14■□□□□ 0.49
PRRT3-203ENST00000412055 NFKBIBQ15653 356 aa18.14■□□□□ 0.49
PRRT3-203ENST00000412055 TPRNQ4KMQ1 711 aa18.14■□□□□ 0.49
PRRT3-203ENST00000412055 HSP90AA1P07900 732 aaKnown RBP18.13■□□□□ 0.49
PRRT3-203ENST00000412055 ROCK2O75116 1388 aaKnown RBP18.13■□□□□ 0.49
PRRT3-203ENST00000412055 FRAT2O75474 233 aaPredicted RBP18.12■□□□□ 0.49
PRRT3-203ENST00000412055 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
PRRT3-203ENST00000412055 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
PRRT3-203ENST00000412055 CNTLNQ9NXG0 1405 aa18.11■□□□□ 0.49
PRRT3-203ENST00000412055 PTPRGP23470 1445 aa18.09■□□□□ 0.49
PRRT3-203ENST00000412055 DAPK1P53355 1430 aa18.09■□□□□ 0.49
PRRT3-203ENST00000412055 IQGAP2Q13576 1575 aa18.09■□□□□ 0.49
PRRT3-203ENST00000412055 ANKRD50Q9ULJ7 1429 aa18.08■□□□□ 0.48
PRRT3-203ENST00000412055 CLUAP1Q96AJ1 413 aa18.07■□□□□ 0.48
PRRT3-203ENST00000412055 UPF2Q9HAU5 1272 aaKnown RBP18.07■□□□□ 0.48
PRRT3-203ENST00000412055 KNSTRNQ9Y448 316 aa18.07■□□□□ 0.48
PRRT3-203ENST00000412055 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.07■□□□□ 0.48
PRRT3-203ENST00000412055 HECW1Q76N89 1606 aa18.07■□□□□ 0.48
PRRT3-203ENST00000412055 BCL2L13Q9BXK5 485 aa18.06■□□□□ 0.48
PRRT3-203ENST00000412055 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
PRRT3-203ENST00000412055 ABCC5O15440 1437 aa18.05■□□□□ 0.48
PRRT3-203ENST00000412055 KIAA0586Q9BVV6 1533 aa18.04■□□□□ 0.48
PRRT3-203ENST00000412055 TMF1P82094 1093 aa18.04■□□□□ 0.48
PRRT3-203ENST00000412055 CFAP43Q8NDM7 1665 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms