RNA–Protein interactions for RNA: ENST00000412055.5

PRRT3-203, Transcript of proline rich transmembrane protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRRT3, Length 3,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3-203ENST00000412055 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
PRRT3-203ENST00000412055 DCAF8L2P0C7V8 631 aa23.96■■□□□ 1.43
PRRT3-203ENST00000412055 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
PRRT3-203ENST00000412055 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
PRRT3-203ENST00000412055 PCGF6Q9BYE7 350 aa23.24■■□□□ 1.31
PRRT3-203ENST00000412055 EHMT2Q96KQ7 1210 aa23.05■■□□□ 1.28
PRRT3-203ENST00000412055 PPARGC1BQ86YN6 1023 aaKnown RBP23■■□□□ 1.27
PRRT3-203ENST00000412055 HRCP23327 699 aa22.65■■□□□ 1.22
PRRT3-203ENST00000412055 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
PRRT3-203ENST00000412055 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
PRRT3-203ENST00000412055 TTBK1Q5TCY1 1321 aaPredicted RBP22.31■■□□□ 1.16
PRRT3-203ENST00000412055 CHIC1Q5VXU3 224 aa22.23■■□□□ 1.15
PRRT3-203ENST00000412055 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
PRRT3-203ENST00000412055 YTHDC1Q96MU7 727 aaKnown RBP21.8■■□□□ 1.08
PRRT3-203ENST00000412055 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
PRRT3-203ENST00000412055 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
PRRT3-203ENST00000412055 ABCC9O60706 1549 aa21.75■■□□□ 1.07
PRRT3-203ENST00000412055 MYO15BQ96JP2 1530 aa21.69■■□□□ 1.06
PRRT3-203ENST00000412055 CCDC180Q9P1Z9 1646 aa21.69■■□□□ 1.06
PRRT3-203ENST00000412055 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
PRRT3-203ENST00000412055 PELP1Q8IZL8 1130 aaKnown RBP21.63■■□□□ 1.05
PRRT3-203ENST00000412055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.57■■□□□ 1.04
PRRT3-203ENST00000412055 SCAF1Q9H7N4 1312 aaKnown RBP21.53■■□□□ 1.04
PRRT3-203ENST00000412055 ZEB1P37275 1124 aaPredicted RBP21.45■■□□□ 1.02
PRRT3-203ENST00000412055 RANGAP1P46060 587 aaPredicted RBP21.4■■□□□ 1.02
PRRT3-203ENST00000412055 GTF3C3Q9Y5Q9 886 aa21.39■■□□□ 1.01
PRRT3-203ENST00000412055 CENPBP07199 599 aaPredicted RBP21.37■■□□□ 1.01
PRRT3-203ENST00000412055 NEUROD1Q13562 356 aa21.21■□□□□ 0.99
PRRT3-203ENST00000412055 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
PRRT3-203ENST00000412055 DIEXFQ68CQ4 756 aaKnown RBP21.18■□□□□ 0.98
PRRT3-203ENST00000412055 SCRIBQ14160 1630 aa21.17■□□□□ 0.98
PRRT3-203ENST00000412055 ACIN1Q9UKV3 1341 aaKnown RBP21.08■□□□□ 0.97
PRRT3-203ENST00000412055 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.96
PRRT3-203ENST00000412055 DCAF1Q9Y4B6 1507 aa21.01■□□□□ 0.95
PRRT3-203ENST00000412055 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
PRRT3-203ENST00000412055 RSF1Q96T23 1441 aaPredicted RBP20.97■□□□□ 0.95
PRRT3-203ENST00000412055 APLP2Q06481 763 aa20.84■□□□□ 0.93
PRRT3-203ENST00000412055 BCANQ96GW7 911 aa20.75■□□□□ 0.91
PRRT3-203ENST00000412055 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
PRRT3-203ENST00000412055 ITGAEP38570 1179 aa20.65■□□□□ 0.9
PRRT3-203ENST00000412055 MYT1Q01538 1121 aa20.65■□□□□ 0.9
PRRT3-203ENST00000412055 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
PRRT3-203ENST00000412055 MIER1Q8N108 512 aa20.55■□□□□ 0.88
PRRT3-203ENST00000412055 NACADO15069 1562 aa20.54■□□□□ 0.88
PRRT3-203ENST00000412055 ZNF316A6NFI3 1004 aaPredicted RBP20.52■□□□□ 0.88
PRRT3-203ENST00000412055 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
PRRT3-203ENST00000412055 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
PRRT3-203ENST00000412055 ATP1B4Q9UN42 357 aaPredicted RBP20.4■□□□□ 0.86
PRRT3-203ENST00000412055 CNGB1Q14028 1251 aaPredicted RBP20.35■□□□□ 0.85
PRRT3-203ENST00000412055 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
PRRT3-203ENST00000412055 WIZO95785 1651 aa20.24■□□□□ 0.83
PRRT3-203ENST00000412055 NEFLP07196 543 aa20.22■□□□□ 0.83
PRRT3-203ENST00000412055 BAZ1AQ9NRL2 1556 aaPredicted RBP20.22■□□□□ 0.83
PRRT3-203ENST00000412055 SOGA1O94964 1423 aa20.12■□□□□ 0.81
PRRT3-203ENST00000412055 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
PRRT3-203ENST00000412055 HIRIP3Q9BW71 556 aaPredicted RBP20.11■□□□□ 0.81
PRRT3-203ENST00000412055 CEP162Q5TB80 1403 aa20.11■□□□□ 0.81
PRRT3-203ENST00000412055 CCDC88BA6NC98 1476 aa20.1■□□□□ 0.81
PRRT3-203ENST00000412055 FKBP8Q14318 412 aa20.08■□□□□ 0.8
PRRT3-203ENST00000412055 TRIM52Q96A61 297 aa20.02■□□□□ 0.79
PRRT3-203ENST00000412055 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
PRRT3-203ENST00000412055 TNIKQ9UKE5 1360 aa19.98■□□□□ 0.79
PRRT3-203ENST00000412055 IRX6P78412 446 aaPredicted RBP19.97■□□□□ 0.79
PRRT3-203ENST00000412055 SUPT16HQ9Y5B9 1047 aaKnown RBP19.94■□□□□ 0.78
PRRT3-203ENST00000412055 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
PRRT3-203ENST00000412055 EEA1Q15075 1411 aa19.91■□□□□ 0.78
PRRT3-203ENST00000412055 CLIP1P30622 1438 aa19.91■□□□□ 0.78
PRRT3-203ENST00000412055 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
PRRT3-203ENST00000412055 GOLGA3Q08378 1498 aa19.89■□□□□ 0.77
PRRT3-203ENST00000412055 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
PRRT3-203ENST00000412055 POLR3GLQ9BT43 218 aa19.88■□□□□ 0.77
PRRT3-203ENST00000412055 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
PRRT3-203ENST00000412055 RUSC2Q8N2Y8 1516 aa19.86■□□□□ 0.77
PRRT3-203ENST00000412055 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
PRRT3-203ENST00000412055 BAZ1BQ9UIG0 1483 aaKnown RBP19.85■□□□□ 0.77
PRRT3-203ENST00000412055 BCL11AQ9H165 835 aa19.84■□□□□ 0.77
PRRT3-203ENST00000412055 FAM50AQ14320 339 aaKnown RBP19.83■□□□□ 0.77
PRRT3-203ENST00000412055 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
PRRT3-203ENST00000412055 ANP32EQ9BTT0 268 aa19.8■□□□□ 0.76
PRRT3-203ENST00000412055 TSHZ2Q9NRE2 1034 aa19.75■□□□□ 0.75
PRRT3-203ENST00000412055 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
PRRT3-203ENST00000412055 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
PRRT3-203ENST00000412055 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
PRRT3-203ENST00000412055 NBR1Q14596 966 aa19.67■□□□□ 0.74
PRRT3-203ENST00000412055 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
PRRT3-203ENST00000412055 ANP32CO43423 234 aa19.6■□□□□ 0.73
PRRT3-203ENST00000412055 KANK4Q5T7N3 995 aaPredicted RBP19.59■□□□□ 0.73
PRRT3-203ENST00000412055 HNRNPUQ00839 825 aaKnown RBP eCLIP19.58■□□□□ 0.73
PRRT3-203ENST00000412055 CDK11AQ9UQ88 783 aaPredicted RBP19.57■□□□□ 0.72
PRRT3-203ENST00000412055 SIN3AQ96ST3 1273 aa19.55■□□□□ 0.72
PRRT3-203ENST00000412055 VPS8Q8N3P4 1428 aa19.54■□□□□ 0.72
PRRT3-203ENST00000412055 RAPGEF2Q9Y4G8 1499 aa19.54■□□□□ 0.72
PRRT3-203ENST00000412055 KIF27Q86VH2 1401 aa19.52■□□□□ 0.71
PRRT3-203ENST00000412055 RBM19Q9Y4C8 960 aaKnown RBP19.52■□□□□ 0.71
PRRT3-203ENST00000412055 NPM2Q86SE8 214 aaKnown RBP19.47■□□□□ 0.71
PRRT3-203ENST00000412055 FAM9BQ8IZU0 186 aa19.47■□□□□ 0.71
PRRT3-203ENST00000412055 FBLN2P98095 1184 aa19.42■□□□□ 0.7
PRRT3-203ENST00000412055 RTN4Q9NQC3 1192 aaKnown RBP19.42■□□□□ 0.7
PRRT3-203ENST00000412055 ZNF326Q5BKZ1 582 aaKnown RBP19.39■□□□□ 0.69
PRRT3-203ENST00000412055 SALL2Q9Y467 1007 aaPredicted RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms