RNA–Protein interactions for RNA: ENST00000411539.6

SEMA4B-202, Transcript of semaphorin 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4B, Length 3,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-202ENST00000411539 TSPY4P0CV99 314 aa21.45■■□□□ 1.02
SEMA4B-202ENST00000411539 TSPY10P0CW01 314 aa21.45■■□□□ 1.02
SEMA4B-202ENST00000411539 BRPF3Q9ULD4 1205 aa21.44■■□□□ 1.02
SEMA4B-202ENST00000411539 BECN1Q14457 450 aa21.44■■□□□ 1.02
SEMA4B-202ENST00000411539 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
SEMA4B-202ENST00000411539 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
SEMA4B-202ENST00000411539 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
SEMA4B-202ENST00000411539 BICRAQ9NZM4 1560 aa21.43■■□□□ 1.02
SEMA4B-202ENST00000411539 NBPF8Q3BBV2 869 aa21.41■■□□□ 1.02
SEMA4B-202ENST00000411539 NAP1L5Q96NT1 182 aaPredicted RBP21.39■■□□□ 1.01
SEMA4B-202ENST00000411539 RALBP1Q15311 655 aa21.38■■□□□ 1.01
SEMA4B-202ENST00000411539 SLKQ9H2G2 1235 aaPredicted RBP21.38■■□□□ 1.01
SEMA4B-202ENST00000411539 ST20-MTHFSA0A0A6YYL1 179 aa21.37■■□□□ 1.01
SEMA4B-202ENST00000411539 CRBNQ96SW2 442 aa21.37■■□□□ 1.01
SEMA4B-202ENST00000411539 NFKBIBQ15653 356 aa21.36■■□□□ 1.01
SEMA4B-202ENST00000411539 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
SEMA4B-202ENST00000411539 MS4A1P11836 297 aa21.35■■□□□ 1.01
SEMA4B-202ENST00000411539 NLRP13Q86W25 1043 aa21.35■■□□□ 1.01
SEMA4B-202ENST00000411539 HSP90AA1P07900 732 aaKnown RBP21.34■■□□□ 1.01
SEMA4B-202ENST00000411539 USP47Q96K76 1375 aa21.34■■□□□ 1.01
SEMA4B-202ENST00000411539 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
SEMA4B-202ENST00000411539 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1.01
SEMA4B-202ENST00000411539 KTN1Q86UP2 1357 aaKnown RBP21.33■■□□□ 1
SEMA4B-202ENST00000411539 SPRYD3Q8NCJ5 442 aa21.32■■□□□ 1
SEMA4B-202ENST00000411539 KNSTRNQ9Y448 316 aa21.32■■□□□ 1
SEMA4B-202ENST00000411539 MYBBP1AQ9BQG0 1328 aaKnown RBP21.32■■□□□ 1
SEMA4B-202ENST00000411539 PDE3BQ13370 1112 aa21.32■■□□□ 1
SEMA4B-202ENST00000411539 HFM1A2PYH4 1435 aa21.32■■□□□ 1
SEMA4B-202ENST00000411539 BACH2Q9BYV9 841 aa21.31■■□□□ 1
SEMA4B-202ENST00000411539 SMG6Q86US8 1419 aaKnown RBP21.31■■□□□ 1
SEMA4B-202ENST00000411539 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
SEMA4B-202ENST00000411539 CUX1P39880 1505 aa21.3■■□□□ 1
SEMA4B-202ENST00000411539 SKAP1Q86WV1 359 aa21.3■■□□□ 1
SEMA4B-202ENST00000411539 FRAT1Q92837 279 aaPredicted RBP21.3■■□□□ 1
SEMA4B-202ENST00000411539 MYOM3Q5VTT5 1437 aa21.29■■□□□ 1
SEMA4B-202ENST00000411539 NEUROD2Q15784 382 aa21.29■■□□□ 1
SEMA4B-202ENST00000411539 PNISRQ8TF01 805 aaKnown RBP21.29■■□□□ 1
SEMA4B-202ENST00000411539 KIF15Q9NS87 1388 aa21.28■■□□□ 1
SEMA4B-202ENST00000411539 GZF1Q9H116 711 aaPredicted RBP21.27■■□□□ 1
SEMA4B-202ENST00000411539 NAIPQ13075 1403 aa21.26■□□□□ 0.99
SEMA4B-202ENST00000411539 CASKIN1Q8WXD9 1431 aa21.26■□□□□ 0.99
SEMA4B-202ENST00000411539 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
SEMA4B-202ENST00000411539 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
SEMA4B-202ENST00000411539 NCOA2Q15596 1464 aa21.24■□□□□ 0.99
SEMA4B-202ENST00000411539 FAM161AQ3B820 660 aa21.23■□□□□ 0.99
SEMA4B-202ENST00000411539 ANP32BQ92688 251 aaKnown RBP21.23■□□□□ 0.99
SEMA4B-202ENST00000411539 TRIM44Q96DX7 344 aaPredicted RBP21.23■□□□□ 0.99
SEMA4B-202ENST00000411539 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
SEMA4B-202ENST00000411539 CFTRP13569 1480 aa21.22■□□□□ 0.99
SEMA4B-202ENST00000411539 ZNF644Q9H582 1327 aaPredicted RBP21.21■□□□□ 0.99
SEMA4B-202ENST00000411539 NUP155O75694 1391 aa21.2■□□□□ 0.98
SEMA4B-202ENST00000411539 FRAT2O75474 233 aaPredicted RBP21.2■□□□□ 0.98
SEMA4B-202ENST00000411539 ARID4BQ4LE39 1312 aaPredicted RBP21.2■□□□□ 0.98
SEMA4B-202ENST00000411539 L1TD1Q5T7N2 865 aaKnown RBP21.2■□□□□ 0.98
SEMA4B-202ENST00000411539 CENPQQ7L2Z9 268 aaPredicted RBP21.18■□□□□ 0.98
SEMA4B-202ENST00000411539 TMF1P82094 1093 aa21.18■□□□□ 0.98
SEMA4B-202ENST00000411539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.18■□□□□ 0.985e-6■■■■■ 30.5
SEMA4B-202ENST00000411539 FYCO1Q9BQS8 1478 aa21.17■□□□□ 0.98
SEMA4B-202ENST00000411539 PLEKHD1A6NEE1 506 aa21.17■□□□□ 0.98
SEMA4B-202ENST00000411539 RSPH6AQ9H0K4 717 aa21.16■□□□□ 0.98
SEMA4B-202ENST00000411539 PNNQ9H307 717 aaKnown RBP21.16■□□□□ 0.98
SEMA4B-202ENST00000411539 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
SEMA4B-202ENST00000411539 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
SEMA4B-202ENST00000411539 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
SEMA4B-202ENST00000411539 MAP3K1Q13233 1512 aa21.14■□□□□ 0.97
SEMA4B-202ENST00000411539 CCDC146Q8IYE0 955 aa21.13■□□□□ 0.97
SEMA4B-202ENST00000411539 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
SEMA4B-202ENST00000411539 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
SEMA4B-202ENST00000411539 PANK3Q9H999 370 aa21.13■□□□□ 0.97
SEMA4B-202ENST00000411539 PCF11O94913 1555 aaKnown RBP21.12■□□□□ 0.97
SEMA4B-202ENST00000411539 TNNT2P45379 298 aaPredicted RBP21.11■□□□□ 0.97
SEMA4B-202ENST00000411539 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
SEMA4B-202ENST00000411539 AQRO60306 1485 aaKnown RBP eCLIP21.1■□□□□ 0.971e-7■■■■■ 29.3
SEMA4B-202ENST00000411539 BRD4O60885 1362 aaPredicted RBP21.08■□□□□ 0.97
SEMA4B-202ENST00000411539 CHGAP10645 457 aaKnown RBP21.07■□□□□ 0.96
SEMA4B-202ENST00000411539 HMGXB3Q12766 1538 aa21.07■□□□□ 0.96
SEMA4B-202ENST00000411539 GOLGA6L3A6NEY3 463 aa21.06■□□□□ 0.96
SEMA4B-202ENST00000411539 FTSJ3Q8IY81 847 aaKnown RBP21.04■□□□□ 0.96
SEMA4B-202ENST00000411539 CDCA8Q53HL2 280 aa21.03■□□□□ 0.96
SEMA4B-202ENST00000411539 ANKRD30AQ9BXX3 1397 aa21.03■□□□□ 0.96
SEMA4B-202ENST00000411539 CLUAP1Q96AJ1 413 aa21.02■□□□□ 0.95
SEMA4B-202ENST00000411539 VSIG10Q8N0Z9 540 aa21.01■□□□□ 0.95
SEMA4B-202ENST00000411539 ADAMTS8Q9UP79 889 aa21.01■□□□□ 0.95
SEMA4B-202ENST00000411539 NCLP19338 710 aaKnown RBP21■□□□□ 0.95
SEMA4B-202ENST00000411539 C20orf194Q5TEA3 1177 aa21■□□□□ 0.95
SEMA4B-202ENST00000411539 COG6Q9Y2V7 657 aa20.99■□□□□ 0.95
SEMA4B-202ENST00000411539 PTPN23Q9H3S7 1636 aa20.99■□□□□ 0.95
SEMA4B-202ENST00000411539 PDS5BQ9NTI5 1447 aa20.98■□□□□ 0.95
SEMA4B-202ENST00000411539 ANKRD30BQ9BXX2 1392 aa20.98■□□□□ 0.95
SEMA4B-202ENST00000411539 BIVM-ERCC5R4GMW8 1640 aa20.97■□□□□ 0.95
SEMA4B-202ENST00000411539 HSCBQ8IWL3 235 aa20.97■□□□□ 0.95
SEMA4B-202ENST00000411539 APAF1O14727 1248 aa20.97■□□□□ 0.95
SEMA4B-202ENST00000411539 HSP90AA2PQ14568 343 aaPredicted RBP20.97■□□□□ 0.95
SEMA4B-202ENST00000411539 MFAP1P55081 439 aaKnown RBP20.96■□□□□ 0.95
SEMA4B-202ENST00000411539 HSP90AB1P08238 724 aaKnown RBP20.95■□□□□ 0.94
SEMA4B-202ENST00000411539 HNRNPMP52272 730 aaKnown RBP eCLIP20.95■□□□□ 0.94
SEMA4B-202ENST00000411539 MYH16Q9H6N6 1097 aa20.94■□□□□ 0.94
SEMA4B-202ENST00000411539 GOLGA6L22H0YM25 854 aa20.94■□□□□ 0.94
SEMA4B-202ENST00000411539 DNAJC5BQ9UF47 199 aa20.94■□□□□ 0.94
SEMA4B-202ENST00000411539 BCL2L13Q9BXK5 485 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms