RNA–Protein interactions for RNA: ENST00000411539.6

SEMA4B-202, Transcript of semaphorin 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4B, Length 3,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-202ENST00000411539 NISCHQ9Y2I1 1504 aa29.38■■■□□ 2.29
SEMA4B-202ENST00000411539 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
SEMA4B-202ENST00000411539 SHROOM4Q9ULL8 1493 aa27.51■■□□□ 1.99
SEMA4B-202ENST00000411539 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
SEMA4B-202ENST00000411539 PCGF6Q9BYE7 350 aa27.02■■□□□ 1.92
SEMA4B-202ENST00000411539 HRCP23327 699 aa26.74■■□□□ 1.87
SEMA4B-202ENST00000411539 PPARGC1BQ86YN6 1023 aaKnown RBP26.45■■□□□ 1.82
SEMA4B-202ENST00000411539 EHMT2Q96KQ7 1210 aa26.19■■□□□ 1.78
SEMA4B-202ENST00000411539 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
SEMA4B-202ENST00000411539 PELP1Q8IZL8 1130 aaKnown RBP26.04■■□□□ 1.76
SEMA4B-202ENST00000411539 LOC105371045A0A1W2PR82 267 aa25.96■■□□□ 1.75
SEMA4B-202ENST00000411539 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
SEMA4B-202ENST00000411539 TRIM26Q12899 539 aaPredicted RBP25.82■■□□□ 1.72
SEMA4B-202ENST00000411539 ZEB1P37275 1124 aaPredicted RBP25.8■■□□□ 1.72
SEMA4B-202ENST00000411539 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
SEMA4B-202ENST00000411539 TTBK1Q5TCY1 1321 aaPredicted RBP25.44■■□□□ 1.66
SEMA4B-202ENST00000411539 CCER1Q8TC90 406 aaPredicted RBP25.42■■□□□ 1.66
SEMA4B-202ENST00000411539 MYO15BQ96JP2 1530 aa25.41■■□□□ 1.66
SEMA4B-202ENST00000411539 CENPBP07199 599 aaPredicted RBP25.4■■□□□ 1.66
SEMA4B-202ENST00000411539 YTHDC1Q96MU7 727 aaKnown RBP25.13■■□□□ 1.61
SEMA4B-202ENST00000411539 MYT1Q01538 1121 aa25.12■■□□□ 1.61
SEMA4B-202ENST00000411539 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
SEMA4B-202ENST00000411539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.05■■□□□ 1.6
SEMA4B-202ENST00000411539 DCAF1Q9Y4B6 1507 aa25.03■■□□□ 1.6
SEMA4B-202ENST00000411539 GTF3C3Q9Y5Q9 886 aa24.95■■□□□ 1.59
SEMA4B-202ENST00000411539 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
SEMA4B-202ENST00000411539 ACIN1Q9UKV3 1341 aaKnown RBP24.86■■□□□ 1.57
SEMA4B-202ENST00000411539 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
SEMA4B-202ENST00000411539 ZCCHC6Q5VYS8 1495 aaKnown RBP24.71■■□□□ 1.55
SEMA4B-202ENST00000411539 APLP2Q06481 763 aa24.6■■□□□ 1.53
SEMA4B-202ENST00000411539 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
SEMA4B-202ENST00000411539 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
SEMA4B-202ENST00000411539 CCDC180Q9P1Z9 1646 aa24.42■■□□□ 1.5
SEMA4B-202ENST00000411539 HNRNPUL2Q1KMD3 747 aaKnown RBP24.42■■□□□ 1.5
SEMA4B-202ENST00000411539 ZNF316A6NFI3 1004 aaPredicted RBP24.3■■□□□ 1.48
SEMA4B-202ENST00000411539 MIER1Q8N108 512 aa24■■□□□ 1.43
SEMA4B-202ENST00000411539 NEFLP07196 543 aa23.97■■□□□ 1.43
SEMA4B-202ENST00000411539 ERICH6Q7L0X2 663 aa23.94■■□□□ 1.42
SEMA4B-202ENST00000411539 BCANQ96GW7 911 aa23.91■■□□□ 1.42
SEMA4B-202ENST00000411539 ITGAEP38570 1179 aa23.88■■□□□ 1.41
SEMA4B-202ENST00000411539 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.41
SEMA4B-202ENST00000411539 ABCC9O60706 1549 aa23.8■■□□□ 1.4
SEMA4B-202ENST00000411539 CSRNP3Q8WYN3 585 aa23.71■■□□□ 1.39
SEMA4B-202ENST00000411539 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
SEMA4B-202ENST00000411539 ATP1B4Q9UN42 357 aaPredicted RBP23.63■■□□□ 1.37
SEMA4B-202ENST00000411539 CEP162Q5TB80 1403 aa23.49■■□□□ 1.35
SEMA4B-202ENST00000411539 FKBP8Q14318 412 aa23.47■■□□□ 1.35
SEMA4B-202ENST00000411539 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
SEMA4B-202ENST00000411539 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
SEMA4B-202ENST00000411539 SUPT16HQ9Y5B9 1047 aaKnown RBP23.43■■□□□ 1.34
SEMA4B-202ENST00000411539 ANP32EQ9BTT0 268 aa23.39■■□□□ 1.33
SEMA4B-202ENST00000411539 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
SEMA4B-202ENST00000411539 DDX10Q13206 875 aaKnown RBP23.28■■□□□ 1.32
SEMA4B-202ENST00000411539 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
SEMA4B-202ENST00000411539 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
SEMA4B-202ENST00000411539 ANP32CO43423 234 aa23.23■■□□□ 1.31
SEMA4B-202ENST00000411539 TRIM52Q96A61 297 aa23.23■■□□□ 1.31
SEMA4B-202ENST00000411539 FAM50AQ14320 339 aaKnown RBP23.22■■□□□ 1.31
SEMA4B-202ENST00000411539 BCL11AQ9H165 835 aa23.18■■□□□ 1.3
SEMA4B-202ENST00000411539 CDK11AQ9UQ88 783 aaPredicted RBP23.18■■□□□ 1.3
SEMA4B-202ENST00000411539 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
SEMA4B-202ENST00000411539 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
SEMA4B-202ENST00000411539 SOGA1O94964 1423 aa23.15■■□□□ 1.3
SEMA4B-202ENST00000411539 CLIP1P30622 1438 aa23.14■■□□□ 1.29
SEMA4B-202ENST00000411539 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
SEMA4B-202ENST00000411539 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
SEMA4B-202ENST00000411539 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
SEMA4B-202ENST00000411539 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
SEMA4B-202ENST00000411539 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
SEMA4B-202ENST00000411539 ABCC8Q09428 1581 aa22.98■■□□□ 1.27
SEMA4B-202ENST00000411539 EEA1Q15075 1411 aa22.98■■□□□ 1.27
SEMA4B-202ENST00000411539 POLR3GLQ9BT43 218 aa22.97■■□□□ 1.27
SEMA4B-202ENST00000411539 NACADO15069 1562 aa22.97■■□□□ 1.27
SEMA4B-202ENST00000411539 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
SEMA4B-202ENST00000411539 HNRNPUQ00839 825 aaKnown RBP eCLIP22.96■■□□□ 1.27
SEMA4B-202ENST00000411539 RTL5Q5HYW3 569 aaPredicted RBP22.92■■□□□ 1.26
SEMA4B-202ENST00000411539 KCNH8Q96L42 1107 aa22.92■■□□□ 1.26
SEMA4B-202ENST00000411539 RBM19Q9Y4C8 960 aaKnown RBP22.92■■□□□ 1.26
SEMA4B-202ENST00000411539 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
SEMA4B-202ENST00000411539 WIZO95785 1651 aa22.8■■□□□ 1.24
SEMA4B-202ENST00000411539 NBR1Q14596 966 aa22.79■■□□□ 1.24
SEMA4B-202ENST00000411539 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
SEMA4B-202ENST00000411539 SIN3AQ96ST3 1273 aa22.78■■□□□ 1.24
SEMA4B-202ENST00000411539 RUSC2Q8N2Y8 1516 aa22.78■■□□□ 1.24
SEMA4B-202ENST00000411539 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
SEMA4B-202ENST00000411539 KANK4Q5T7N3 995 aaPredicted RBP22.73■■□□□ 1.23
SEMA4B-202ENST00000411539 FAM9BQ8IZU0 186 aa22.71■■□□□ 1.23
SEMA4B-202ENST00000411539 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
SEMA4B-202ENST00000411539 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
SEMA4B-202ENST00000411539 DHX57Q6P158 1386 aaKnown RBP22.66■■□□□ 1.22
SEMA4B-202ENST00000411539 ANP32AP39687 249 aaKnown RBP22.62■■□□□ 1.21
SEMA4B-202ENST00000411539 DAXXQ9UER7 740 aaPredicted RBP22.6■■□□□ 1.21
SEMA4B-202ENST00000411539 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.21
SEMA4B-202ENST00000411539 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
SEMA4B-202ENST00000411539 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
SEMA4B-202ENST00000411539 MRS2Q9HD23 443 aa22.5■■□□□ 1.19
SEMA4B-202ENST00000411539 ZNF326Q5BKZ1 582 aaKnown RBP22.49■■□□□ 1.19
SEMA4B-202ENST00000411539 B4GALNT3Q6L9W6 998 aa22.49■■□□□ 1.19
SEMA4B-202ENST00000411539 CCDC136Q96JN2 1154 aa22.47■■□□□ 1.19
SEMA4B-202ENST00000411539 CCER2I3L3R5 266 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms