RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 MS4A1P11836 297 aa21.98■■□□□ 1.11
PCDHA13-202ENST00000409494 SENP3Q9H4L4 574 aaPredicted RBP21.98■■□□□ 1.11
PCDHA13-202ENST00000409494 MYOM3Q5VTT5 1437 aa21.97■■□□□ 1.11
PCDHA13-202ENST00000409494 SUPT16HQ9Y5B9 1047 aaKnown RBP21.97■■□□□ 1.11
PCDHA13-202ENST00000409494 CYB5RLQ6IPT4 315 aa21.96■■□□□ 1.11
PCDHA13-202ENST00000409494 CUX1P39880 1505 aa21.96■■□□□ 1.11
PCDHA13-202ENST00000409494 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
PCDHA13-202ENST00000409494 TOPBP1Q92547 1522 aa21.95■■□□□ 1.1
PCDHA13-202ENST00000409494 HSP90AA1P07900 732 aaKnown RBP21.94■■□□□ 1.1
PCDHA13-202ENST00000409494 LMOD2Q6P5Q4 547 aa21.93■■□□□ 1.1
PCDHA13-202ENST00000409494 STAC3Q96MF2 364 aa21.93■■□□□ 1.1
PCDHA13-202ENST00000409494 LAMC3Q9Y6N6 1575 aa21.93■■□□□ 1.1
PCDHA13-202ENST00000409494 KIF21BO75037 1637 aa21.92■■□□□ 1.1
PCDHA13-202ENST00000409494 ROCK2O75116 1388 aaKnown RBP21.92■■□□□ 1.1
PCDHA13-202ENST00000409494 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
PCDHA13-202ENST00000409494 BICRAQ9NZM4 1560 aa21.91■■□□□ 1.1
PCDHA13-202ENST00000409494 A0A0G2JS52 829 aa21.91■■□□□ 1.1
PCDHA13-202ENST00000409494 DNMBPQ6XZF7 1577 aa21.9■■□□□ 1.1
PCDHA13-202ENST00000409494 TOP2BQ02880 1626 aa21.89■■□□□ 1.1
PCDHA13-202ENST00000409494 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.1
PCDHA13-202ENST00000409494 MORC1Q86VD1 984 aa21.89■■□□□ 1.09
PCDHA13-202ENST00000409494 EFCAB5A4FU69 1503 aa21.88■■□□□ 1.09
PCDHA13-202ENST00000409494 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
PCDHA13-202ENST00000409494 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
PCDHA13-202ENST00000409494 ANP32EQ9BTT0 268 aa21.86■■□□□ 1.09
PCDHA13-202ENST00000409494 NESP48681 1621 aa21.85■■□□□ 1.09
PCDHA13-202ENST00000409494 CCDC144AA2RUR9 1427 aa21.85■■□□□ 1.09
PCDHA13-202ENST00000409494 KTN1Q86UP2 1357 aaKnown RBP21.85■■□□□ 1.09
PCDHA13-202ENST00000409494 SYNJ2O15056 1496 aa21.85■■□□□ 1.09
PCDHA13-202ENST00000409494 NBR1Q14596 966 aa21.85■■□□□ 1.09
PCDHA13-202ENST00000409494 RALBP1Q15311 655 aa21.84■■□□□ 1.09
PCDHA13-202ENST00000409494 POLA1P09884 1462 aaPredicted RBP21.84■■□□□ 1.09
PCDHA13-202ENST00000409494 VGFO15240 615 aaPredicted RBP21.84■■□□□ 1.09
PCDHA13-202ENST00000409494 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
PCDHA13-202ENST00000409494 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
PCDHA13-202ENST00000409494 PLEKHG5O94827 1062 aa21.81■■□□□ 1.08
PCDHA13-202ENST00000409494 CC2D1BQ5T0F9 858 aaKnown RBP21.81■■□□□ 1.08
PCDHA13-202ENST00000409494 FYCO1Q9BQS8 1478 aa21.81■■□□□ 1.08
PCDHA13-202ENST00000409494 STK26Q9P289 416 aa21.8■■□□□ 1.08
PCDHA13-202ENST00000409494 FTSJ3Q8IY81 847 aaKnown RBP21.8■■□□□ 1.08
PCDHA13-202ENST00000409494 CALD1Q05682 793 aaKnown RBP21.79■■□□□ 1.08
PCDHA13-202ENST00000409494 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
PCDHA13-202ENST00000409494 FOXD1Q16676 465 aa21.78■■□□□ 1.08
PCDHA13-202ENST00000409494 L3MBTL2Q969R5 705 aa21.78■■□□□ 1.08
PCDHA13-202ENST00000409494 PRG4Q92954 1404 aaPredicted RBP21.77■■□□□ 1.08
PCDHA13-202ENST00000409494 PRXQ9BXM0 1461 aa21.77■■□□□ 1.08
PCDHA13-202ENST00000409494 FGD6Q6ZV73 1430 aa21.77■■□□□ 1.08
PCDHA13-202ENST00000409494 PEG3Q9GZU2 1588 aa21.77■■□□□ 1.07
PCDHA13-202ENST00000409494 FAM69CQ0P6D2 419 aa21.76■■□□□ 1.07
PCDHA13-202ENST00000409494 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
PCDHA13-202ENST00000409494 PLEKHH2Q8IVE3 1493 aa21.74■■□□□ 1.07
PCDHA13-202ENST00000409494 ANP32BQ92688 251 aaKnown RBP21.73■■□□□ 1.07
PCDHA13-202ENST00000409494 LRRC9Q6ZRR7 1453 aa21.73■■□□□ 1.07
PCDHA13-202ENST00000409494 TNNT2P45379 298 aaPredicted RBP21.72■■□□□ 1.07
PCDHA13-202ENST00000409494 SAFB2Q14151 953 aaKnown RBP eCLIP21.72■■□□□ 1.07
PCDHA13-202ENST00000409494 NEUROD2Q15784 382 aa21.72■■□□□ 1.07
PCDHA13-202ENST00000409494 ABCA10Q8WWZ4 1543 aa21.72■■□□□ 1.07
PCDHA13-202ENST00000409494 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.71■■□□□ 1.07
PCDHA13-202ENST00000409494 RTF1Q92541 710 aaKnown RBP21.69■■□□□ 1.06
PCDHA13-202ENST00000409494 KIAA0586Q9BVV6 1533 aa21.68■■□□□ 1.06
PCDHA13-202ENST00000409494 CASC1Q6TDU7 716 aa21.68■■□□□ 1.06
PCDHA13-202ENST00000409494 LAS1LQ9Y4W2 734 aaKnown RBP21.68■■□□□ 1.06
PCDHA13-202ENST00000409494 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
PCDHA13-202ENST00000409494 PRDM2Q13029 1718 aa21.67■■□□□ 1.06
PCDHA13-202ENST00000409494 KIF15Q9NS87 1388 aa21.67■■□□□ 1.06
PCDHA13-202ENST00000409494 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
PCDHA13-202ENST00000409494 NCOA2Q15596 1464 aa21.64■■□□□ 1.05
PCDHA13-202ENST00000409494 MIA2Q96PC5 1412 aa21.63■■□□□ 1.05
PCDHA13-202ENST00000409494 DHX57Q6P158 1386 aaKnown RBP21.63■■□□□ 1.05
PCDHA13-202ENST00000409494 BECN1Q14457 450 aa21.63■■□□□ 1.05
PCDHA13-202ENST00000409494 DDRGK1Q96HY6 314 aa21.62■■□□□ 1.05
PCDHA13-202ENST00000409494 SENP3-EIF4A1A0A087X0R7 540 aa21.61■■□□□ 1.05
PCDHA13-202ENST00000409494 ARXQ96QS3 562 aa21.61■■□□□ 1.05
PCDHA13-202ENST00000409494 NGDNQ8NEJ9 315 aaKnown RBP21.6■■□□□ 1.05
PCDHA13-202ENST00000409494 ANKRD50Q9ULJ7 1429 aa21.6■■□□□ 1.05
PCDHA13-202ENST00000409494 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
PCDHA13-202ENST00000409494 TROQ12816 1431 aaPredicted RBP21.6■■□□□ 1.05
PCDHA13-202ENST00000409494 EHBP1L1Q8N3D4 1523 aa21.59■■□□□ 1.05
PCDHA13-202ENST00000409494 PAK3O75914 559 aaPredicted RBP21.59■■□□□ 1.05
PCDHA13-202ENST00000409494 CFAP44Q96MT7 982 aa21.59■■□□□ 1.05
PCDHA13-202ENST00000409494 EVC2Q86UK5 1308 aa21.59■■□□□ 1.05
PCDHA13-202ENST00000409494 MAGI1Q96QZ7 1491 aaPredicted RBP21.59■■□□□ 1.05
PCDHA13-202ENST00000409494 NLRP13Q86W25 1043 aa21.58■■□□□ 1.05
PCDHA13-202ENST00000409494 ARHGAP5Q13017 1502 aa21.58■■□□□ 1.05
PCDHA13-202ENST00000409494 LMOD3Q0VAK6 560 aa21.57■■□□□ 1.04
PCDHA13-202ENST00000409494 HECW1Q76N89 1606 aa21.57■■□□□ 1.04
PCDHA13-202ENST00000409494 HDAC5Q9UQL6 1122 aa21.56■■□□□ 1.04
PCDHA13-202ENST00000409494 CUL7Q14999 1698 aa21.56■■□□□ 1.04
PCDHA13-202ENST00000409494 U2AF1L5P0DN76 240 aaPredicted RBP21.56■■□□□ 1.04
PCDHA13-202ENST00000409494 U2AF1Q01081 240 aaKnown RBP eCLIP21.56■■□□□ 1.04
PCDHA13-202ENST00000409494 B4GALNT3Q6L9W6 998 aa21.55■■□□□ 1.04
PCDHA13-202ENST00000409494 CSB-PGBD3P0DP91 1061 aa21.54■■□□□ 1.04
PCDHA13-202ENST00000409494 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
PCDHA13-202ENST00000409494 FRAT1Q92837 279 aaPredicted RBP21.53■■□□□ 1.04
PCDHA13-202ENST00000409494 ARAP1Q96P48 1450 aa21.53■■□□□ 1.04
PCDHA13-202ENST00000409494 RBM19Q9Y4C8 960 aaKnown RBP21.53■■□□□ 1.04
PCDHA13-202ENST00000409494 TRAK1Q9UPV9 953 aa21.52■■□□□ 1.04
PCDHA13-202ENST00000409494 SOX12O15370 315 aa21.52■■□□□ 1.04
PCDHA13-202ENST00000409494 NPHP1O15259 732 aa21.51■■□□□ 1.03
PCDHA13-202ENST00000409494 PDE3BQ13370 1112 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms