RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 PCF11O94913 1555 aaKnown RBP9.34□□□□□ -0.91
GTF3C3-202ENST00000409364 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
GTF3C3-202ENST00000409364 PHLDB1Q86UU1 1377 aa9.32□□□□□ -0.92
GTF3C3-202ENST00000409364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.32□□□□□ -0.92
GTF3C3-202ENST00000409364 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
GTF3C3-202ENST00000409364 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
GTF3C3-202ENST00000409364 NUP160Q12769 1436 aa9.31□□□□□ -0.92
GTF3C3-202ENST00000409364 CLSPNQ9HAW4 1339 aa9.31□□□□□ -0.92
GTF3C3-202ENST00000409364 FAM50AQ14320 339 aaKnown RBP9.31□□□□□ -0.92
GTF3C3-202ENST00000409364 CDK11AQ9UQ88 783 aaPredicted RBP9.31□□□□□ -0.92
GTF3C3-202ENST00000409364 CARMIL2Q6F5E8 1435 aa9.3□□□□□ -0.92
GTF3C3-202ENST00000409364 CCDC18Q5T9S5 1454 aa9.3□□□□□ -0.92
GTF3C3-202ENST00000409364 DISP1Q96F81 1524 aa9.29□□□□□ -0.92
GTF3C3-202ENST00000409364 ITGAEP38570 1179 aa9.29□□□□□ -0.92
GTF3C3-202ENST00000409364 FAM163AQ96GL9 167 aaPredicted RBP9.29□□□□□ -0.92
GTF3C3-202ENST00000409364 CFAP43Q8NDM7 1665 aa9.28□□□□□ -0.92
GTF3C3-202ENST00000409364 EPRSP07814 1512 aaKnown RBP9.26□□□□□ -0.93
GTF3C3-202ENST00000409364 CEP170Q5SW79 1584 aa9.26□□□□□ -0.93
GTF3C3-202ENST00000409364 FGD6Q6ZV73 1430 aa9.25□□□□□ -0.93
GTF3C3-202ENST00000409364 KIAA0556O60303 1618 aa9.25□□□□□ -0.93
GTF3C3-202ENST00000409364 HECW1Q76N89 1606 aa9.25□□□□□ -0.93
GTF3C3-202ENST00000409364 SETD5Q9C0A6 1442 aa9.25□□□□□ -0.93
GTF3C3-202ENST00000409364 NCOA2Q15596 1464 aa9.25□□□□□ -0.93
GTF3C3-202ENST00000409364 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
GTF3C3-202ENST00000409364 LCE2DQ5TA82 110 aaPredicted RBP9.24□□□□□ -0.93
GTF3C3-202ENST00000409364 CDAN1Q8IWY9 1227 aa9.24□□□□□ -0.93
GTF3C3-202ENST00000409364 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
GTF3C3-202ENST00000409364 MYOM3Q5VTT5 1437 aa9.24□□□□□ -0.93
GTF3C3-202ENST00000409364 EHBP1L1Q8N3D4 1523 aa9.24□□□□□ -0.93
GTF3C3-202ENST00000409364 DHX57Q6P158 1386 aaKnown RBP9.23□□□□□ -0.93
GTF3C3-202ENST00000409364 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
GTF3C3-202ENST00000409364 RAB3GAP2Q9H2M9 1393 aa9.21□□□□□ -0.93
GTF3C3-202ENST00000409364 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
GTF3C3-202ENST00000409364 NUP153P49790 1475 aaKnown RBP9.21□□□□□ -0.94
GTF3C3-202ENST00000409364 PRG4Q92954 1404 aaPredicted RBP9.21□□□□□ -0.94
GTF3C3-202ENST00000409364 MIA2Q96PC5 1412 aa9.21□□□□□ -0.94
GTF3C3-202ENST00000409364 PLEKHD1A6NEE1 506 aa9.2□□□□□ -0.94
GTF3C3-202ENST00000409364 ARHGEF11O15085 1522 aa9.2□□□□□ -0.94
GTF3C3-202ENST00000409364 CHD1O14646 1710 aa9.2□□□□□ -0.94
GTF3C3-202ENST00000409364 PTPRGP23470 1445 aa9.2□□□□□ -0.94
GTF3C3-202ENST00000409364 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
GTF3C3-202ENST00000409364 CDK13Q14004 1512 aaKnown RBP9.18□□□□□ -0.94
GTF3C3-202ENST00000409364 MAGI3Q5TCQ9 1506 aa9.18□□□□□ -0.94
GTF3C3-202ENST00000409364 PLB1Q6P1J6 1458 aa9.18□□□□□ -0.94
GTF3C3-202ENST00000409364 RAPGEF6Q8TEU7 1601 aa9.18□□□□□ -0.94
GTF3C3-202ENST00000409364 ACIN1Q9UKV3 1341 aaKnown RBP9.17□□□□□ -0.94
GTF3C3-202ENST00000409364 TROQ12816 1431 aaPredicted RBP9.17□□□□□ -0.94
GTF3C3-202ENST00000409364 FARP1Q9Y4F1 1045 aaPredicted RBP9.17□□□□□ -0.94
GTF3C3-202ENST00000409364 TCOF1Q13428 1488 aaKnown RBP9.16□□□□□ -0.94
GTF3C3-202ENST00000409364 LRRIQ1Q96JM4 1722 aa9.16□□□□□ -0.94
GTF3C3-202ENST00000409364 CFDP1Q9UEE9 299 aaPredicted RBP9.15□□□□□ -0.94
GTF3C3-202ENST00000409364 HFM1A2PYH4 1435 aa9.15□□□□□ -0.95
GTF3C3-202ENST00000409364 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
GTF3C3-202ENST00000409364 TIMELESSQ9UNS1 1208 aa9.14□□□□□ -0.95
GTF3C3-202ENST00000409364 PTPRKQ15262 1439 aa9.14□□□□□ -0.95
GTF3C3-202ENST00000409364 ATP10BO94823 1461 aa9.14□□□□□ -0.95
GTF3C3-202ENST00000409364 SCUBE2Q9NQ36 999 aa9.14□□□□□ -0.95
GTF3C3-202ENST00000409364 ABCA8O94911 1581 aa9.13□□□□□ -0.95
GTF3C3-202ENST00000409364 MMRN1Q13201 1228 aa9.13□□□□□ -0.95
GTF3C3-202ENST00000409364 UACAQ9BZF9 1416 aa9.13□□□□□ -0.95
GTF3C3-202ENST00000409364 PTPN23Q9H3S7 1636 aa9.12□□□□□ -0.95
GTF3C3-202ENST00000409364 CHIC2Q9UKJ5 165 aa9.11□□□□□ -0.95
GTF3C3-202ENST00000409364 NAIPQ13075 1403 aa9.11□□□□□ -0.95
GTF3C3-202ENST00000409364 CLASP1Q7Z460 1538 aa9.11□□□□□ -0.95
GTF3C3-202ENST00000409364 RRP7BPQ9NSQ0 103 aa9.11□□□□□ -0.95
GTF3C3-202ENST00000409364 ROCK1Q13464 1354 aa9.1□□□□□ -0.95
GTF3C3-202ENST00000409364 AKNAQ7Z591 1439 aa9.1□□□□□ -0.95
GTF3C3-202ENST00000409364 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
GTF3C3-202ENST00000409364 ZNF644Q9H582 1327 aaPredicted RBP9.1□□□□□ -0.95
GTF3C3-202ENST00000409364 GALR2O43603 387 aaPredicted RBP9.09□□□□□ -0.95
GTF3C3-202ENST00000409364 GPATCH8Q9UKJ3 1502 aaKnown RBP9.09□□□□□ -0.95
GTF3C3-202ENST00000409364 SHROOM2Q13796 1616 aa9.09□□□□□ -0.95
GTF3C3-202ENST00000409364 DIEXFQ68CQ4 756 aaKnown RBP9.08□□□□□ -0.96
GTF3C3-202ENST00000409364 ATF5Q9Y2D1 282 aaPredicted RBP9.08□□□□□ -0.96
GTF3C3-202ENST00000409364 ERCC6L2Q5T890 1561 aa9.08□□□□□ -0.96
GTF3C3-202ENST00000409364 ZNF777Q9ULD5 760 aaPredicted RBP9.08□□□□□ -0.96
GTF3C3-202ENST00000409364 ABCC5O15440 1437 aa9.07□□□□□ -0.96
GTF3C3-202ENST00000409364 RSPH4AQ5TD94 716 aa9.07□□□□□ -0.96
GTF3C3-202ENST00000409364 DAPK1P53355 1430 aa9.07□□□□□ -0.96
GTF3C3-202ENST00000409364 NEUROD1Q13562 356 aa9.06□□□□□ -0.96
GTF3C3-202ENST00000409364 TRIM52Q96A61 297 aa9.06□□□□□ -0.96
GTF3C3-202ENST00000409364 SIN3AQ96ST3 1273 aa9.06□□□□□ -0.96
GTF3C3-202ENST00000409364 SSUH2Q9Y2M2 353 aa9.06□□□□□ -0.96
GTF3C3-202ENST00000409364 MAPKBP1O60336 1514 aa9.06□□□□□ -0.96
GTF3C3-202ENST00000409364 TSPY4P0CV99 314 aa9.05□□□□□ -0.96
GTF3C3-202ENST00000409364 TSPY10P0CW01 314 aa9.05□□□□□ -0.96
GTF3C3-202ENST00000409364 C7P10643 843 aa9.05□□□□□ -0.96
GTF3C3-202ENST00000409364 SLC39A7Q92504 469 aa9.05□□□□□ -0.96
GTF3C3-202ENST00000409364 ABCC10Q5T3U5 1492 aa9.05□□□□□ -0.96
GTF3C3-202ENST00000409364 ZNF692Q9BU19 519 aaPredicted RBP9.05□□□□□ -0.96
GTF3C3-202ENST00000409364 UHRF1BP1LA0JNW5 1464 aa9.04□□□□□ -0.96
GTF3C3-202ENST00000409364 METRNQ9UJH8 293 aa9.04□□□□□ -0.96
GTF3C3-202ENST00000409364 ADCY10Q96PN6 1610 aa9.04□□□□□ -0.96
GTF3C3-202ENST00000409364 ABCC2Q92887 1545 aa9.03□□□□□ -0.96
GTF3C3-202ENST00000409364 MPHOSPH9Q99550 1183 aa9.03□□□□□ -0.96
GTF3C3-202ENST00000409364 ANKRD30AQ9BXX3 1397 aa9.03□□□□□ -0.96
GTF3C3-202ENST00000409364 PPP1R15AO75807 674 aaPredicted RBP9.02□□□□□ -0.96
GTF3C3-202ENST00000409364 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.96
GTF3C3-202ENST00000409364 KIF14Q15058 1648 aa9.02□□□□□ -0.96
GTF3C3-202ENST00000409364 CAMSAP2Q08AD1 1489 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms