RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 SLKQ9H2G2 1235 aaPredicted RBP18.36■□□□□ 0.53
DUSP28-202ENST00000405954 DCAF11Q8TEB1 546 aa18.35■□□□□ 0.53
DUSP28-202ENST00000405954 BACH2Q9BYV9 841 aa18.35■□□□□ 0.53
DUSP28-202ENST00000405954 RGS3P49796 1198 aa18.33■□□□□ 0.52
DUSP28-202ENST00000405954 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
DUSP28-202ENST00000405954 FOXD1Q16676 465 aa18.32■□□□□ 0.52
DUSP28-202ENST00000405954 RRP7BPQ9NSQ0 103 aa18.32■□□□□ 0.52
DUSP28-202ENST00000405954 HSPA5P11021 654 aaKnown RBP18.32■□□□□ 0.52
DUSP28-202ENST00000405954 FGD5Q6ZNL6 1462 aa18.31■□□□□ 0.52
DUSP28-202ENST00000405954 RRAGDQ9NQL2 400 aaPredicted RBP18.31■□□□□ 0.52
DUSP28-202ENST00000405954 PDE4CQ08493 712 aa18.31■□□□□ 0.52
DUSP28-202ENST00000405954 LRRC9Q6ZRR7 1453 aa18.3■□□□□ 0.52
DUSP28-202ENST00000405954 SKAP1Q86WV1 359 aa18.29■□□□□ 0.52
DUSP28-202ENST00000405954 TIAM1Q13009 1591 aa18.29■□□□□ 0.52
DUSP28-202ENST00000405954 PRKRIP1Q9H875 184 aaPredicted RBP18.29■□□□□ 0.52
DUSP28-202ENST00000405954 CFTRP13569 1480 aa18.28■□□□□ 0.52
DUSP28-202ENST00000405954 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
DUSP28-202ENST00000405954 GOLGA6L3A6NEY3 463 aa18.27■□□□□ 0.52
DUSP28-202ENST00000405954 ZNF326Q5BKZ1 582 aaKnown RBP18.27■□□□□ 0.52
DUSP28-202ENST00000405954 POGKQ9P215 609 aa18.27■□□□□ 0.52
DUSP28-202ENST00000405954 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
DUSP28-202ENST00000405954 MS4A1P11836 297 aa18.24■□□□□ 0.51
DUSP28-202ENST00000405954 CADPSQ9ULU8 1353 aa18.24■□□□□ 0.51
DUSP28-202ENST00000405954 SPRYD3Q8NCJ5 442 aa18.23■□□□□ 0.51
DUSP28-202ENST00000405954 BECN1Q14457 450 aa18.22■□□□□ 0.51
DUSP28-202ENST00000405954 RCAN3Q9UKA8 241 aa18.2■□□□□ 0.5
DUSP28-202ENST00000405954 HMGXB3Q12766 1538 aa18.19■□□□□ 0.5
DUSP28-202ENST00000405954 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
DUSP28-202ENST00000405954 MTUS2Q5JR59 1369 aa18.18■□□□□ 0.5
DUSP28-202ENST00000405954 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
DUSP28-202ENST00000405954 ANP32BQ92688 251 aaKnown RBP18.18■□□□□ 0.5
DUSP28-202ENST00000405954 PLIN1O60240 522 aa18.18■□□□□ 0.5
DUSP28-202ENST00000405954 FAM13BQ9NYF5 915 aa18.17■□□□□ 0.5
DUSP28-202ENST00000405954 RRP1P56182 461 aaKnown RBP18.17■□□□□ 0.5
DUSP28-202ENST00000405954 PTPRKQ15262 1439 aa18.16■□□□□ 0.5
DUSP28-202ENST00000405954 TNNT2P45379 298 aaPredicted RBP18.15■□□□□ 0.5
DUSP28-202ENST00000405954 FBLN2P98095 1184 aa18.15■□□□□ 0.5
DUSP28-202ENST00000405954 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
DUSP28-202ENST00000405954 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.49
DUSP28-202ENST00000405954 AAMPQ13685 434 aa18.1■□□□□ 0.49
DUSP28-202ENST00000405954 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
DUSP28-202ENST00000405954 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
DUSP28-202ENST00000405954 FGD1P98174 961 aa18.09■□□□□ 0.49
DUSP28-202ENST00000405954 ERCC6Q03468 1493 aa18.08■□□□□ 0.49
DUSP28-202ENST00000405954 FANCD2Q9BXW9 1451 aa18.08■□□□□ 0.49
DUSP28-202ENST00000405954 FAM161AQ3B820 660 aa18.08■□□□□ 0.49
DUSP28-202ENST00000405954 PDCL3Q9H2J4 239 aa18.08■□□□□ 0.48
DUSP28-202ENST00000405954 CLCN1P35523 988 aa18.07■□□□□ 0.48
DUSP28-202ENST00000405954 PANK2Q9BZ23 570 aa18.07■□□□□ 0.48
DUSP28-202ENST00000405954 ZHX1Q9UKY1 873 aaPredicted RBP18.07■□□□□ 0.48
DUSP28-202ENST00000405954 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
DUSP28-202ENST00000405954 ESPNB1AK53 854 aa18.05■□□□□ 0.48
DUSP28-202ENST00000405954 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
DUSP28-202ENST00000405954 MSNP26038 577 aaKnown RBP18.04■□□□□ 0.48
DUSP28-202ENST00000405954 CRBNQ96SW2 442 aa18.04■□□□□ 0.48
DUSP28-202ENST00000405954 BCL11BQ9C0K0 894 aaPredicted RBP18.04■□□□□ 0.48
DUSP28-202ENST00000405954 ZBTB7CA1YPR0 619 aa18.03■□□□□ 0.48
DUSP28-202ENST00000405954 KIAA1211Q6ZU35 1233 aa18.03■□□□□ 0.48
DUSP28-202ENST00000405954 PRDM10Q9NQV6 1147 aa18.03■□□□□ 0.48
DUSP28-202ENST00000405954 TPM2P07951 284 aa18.02■□□□□ 0.48
DUSP28-202ENST00000405954 BBXQ8WY36 941 aaPredicted RBP18.02■□□□□ 0.48
DUSP28-202ENST00000405954 XRCC6P12956 609 aaKnown RBP eCLIP18.01■□□□□ 0.47
DUSP28-202ENST00000405954 CDK11BP21127 795 aaKnown RBP18.01■□□□□ 0.47
DUSP28-202ENST00000405954 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
DUSP28-202ENST00000405954 NCLP19338 710 aaKnown RBP18■□□□□ 0.47
DUSP28-202ENST00000405954 CNTLNQ9NXG0 1405 aa17.99■□□□□ 0.47
DUSP28-202ENST00000405954 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
DUSP28-202ENST00000405954 L3MBTL2Q969R5 705 aa17.98■□□□□ 0.47
DUSP28-202ENST00000405954 PDIA4P13667 645 aaKnown RBP17.97■□□□□ 0.47
DUSP28-202ENST00000405954 ZNF644Q9H582 1327 aaPredicted RBP17.96■□□□□ 0.47
DUSP28-202ENST00000405954 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.46
DUSP28-202ENST00000405954 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
DUSP28-202ENST00000405954 PDS5BQ9NTI5 1447 aa17.94■□□□□ 0.46
DUSP28-202ENST00000405954 MRE11P49959 708 aa17.94■□□□□ 0.46
DUSP28-202ENST00000405954 CALD1Q05682 793 aaKnown RBP17.94■□□□□ 0.46
DUSP28-202ENST00000405954 NCOA2Q15596 1464 aa17.94■□□□□ 0.46
DUSP28-202ENST00000405954 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
DUSP28-202ENST00000405954 R3HCC1Q9Y3T6 440 aaKnown RBP17.94■□□□□ 0.46
DUSP28-202ENST00000405954 NAIPQ13075 1403 aa17.94■□□□□ 0.46
DUSP28-202ENST00000405954 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
DUSP28-202ENST00000405954 DNTTIP2Q5QJE6 756 aaKnown RBP17.92■□□□□ 0.46
DUSP28-202ENST00000405954 FYCO1Q9BQS8 1478 aa17.92■□□□□ 0.46
DUSP28-202ENST00000405954 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.92■□□□□ 0.46
DUSP28-202ENST00000405954 CCDC7Q96M83 1385 aa17.9■□□□□ 0.46
DUSP28-202ENST00000405954 NBPF8Q3BBV2 869 aa17.9■□□□□ 0.46
DUSP28-202ENST00000405954 MPHOSPH9Q99550 1183 aa17.9■□□□□ 0.46
DUSP28-202ENST00000405954 UACAQ9BZF9 1416 aa17.89■□□□□ 0.46
DUSP28-202ENST00000405954 KDM6BO15054 1643 aa17.89■□□□□ 0.45
DUSP28-202ENST00000405954 PTPN23Q9H3S7 1636 aa17.89■□□□□ 0.45
DUSP28-202ENST00000405954 TRAK2O60296 914 aa17.89■□□□□ 0.45
DUSP28-202ENST00000405954 CENPQQ7L2Z9 268 aaPredicted RBP17.89■□□□□ 0.45
DUSP28-202ENST00000405954 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
DUSP28-202ENST00000405954 GRPEL1Q9HAV7 217 aa17.87■□□□□ 0.45
DUSP28-202ENST00000405954 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
DUSP28-202ENST00000405954 LRRIQ1Q96JM4 1722 aa17.87■□□□□ 0.45
DUSP28-202ENST00000405954 HFM1A2PYH4 1435 aa17.87■□□□□ 0.45
DUSP28-202ENST00000405954 CHMP4BQ9H444 224 aaKnown RBP17.86■□□□□ 0.45
DUSP28-202ENST00000405954 FMN1Q68DA7 1419 aa17.86■□□□□ 0.45
DUSP28-202ENST00000405954 KTN1Q86UP2 1357 aaKnown RBP17.86■□□□□ 0.45
DUSP28-202ENST00000405954 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms