RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 SLC4A3P48751 1232 aa18.16■□□□□ 0.5
HMGA2-204ENST00000403681 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
HMGA2-204ENST00000403681 KIF7Q2M1P5 1343 aa18.16■□□□□ 0.5
HMGA2-204ENST00000403681 NAP1L5Q96NT1 182 aaPredicted RBP18.16■□□□□ 0.5
HMGA2-204ENST00000403681 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
HMGA2-204ENST00000403681 MS4A1P11836 297 aa18.14■□□□□ 0.5
HMGA2-204ENST00000403681 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.5
HMGA2-204ENST00000403681 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
HMGA2-204ENST00000403681 AKNAQ7Z591 1439 aa18.13■□□□□ 0.49
HMGA2-204ENST00000403681 PKD2Q13563 968 aa18.13■□□□□ 0.49
HMGA2-204ENST00000403681 KNSTRNQ9Y448 316 aa18.11■□□□□ 0.49
HMGA2-204ENST00000403681 PLIN1O60240 522 aa18.11■□□□□ 0.49
HMGA2-204ENST00000403681 KTN1Q86UP2 1357 aaKnown RBP18.11■□□□□ 0.49
HMGA2-204ENST00000403681 MAPKBP1O60336 1514 aa18.1■□□□□ 0.49
HMGA2-204ENST00000403681 NLRP13Q86W25 1043 aa18.1■□□□□ 0.49
HMGA2-204ENST00000403681 TRIM44Q96DX7 344 aaPredicted RBP18.09■□□□□ 0.49
HMGA2-204ENST00000403681 L1TD1Q5T7N2 865 aaKnown RBP18.08■□□□□ 0.49
HMGA2-204ENST00000403681 TIAM1Q13009 1591 aa18.08■□□□□ 0.49
HMGA2-204ENST00000403681 TOP2BQ02880 1626 aa18.07■□□□□ 0.48
HMGA2-204ENST00000403681 ROCK2O75116 1388 aaKnown RBP18.07■□□□□ 0.48
HMGA2-204ENST00000403681 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
HMGA2-204ENST00000403681 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
HMGA2-204ENST00000403681 KIF15Q9NS87 1388 aa18.06■□□□□ 0.48
HMGA2-204ENST00000403681 SLKQ9H2G2 1235 aaPredicted RBP18.05■□□□□ 0.48
HMGA2-204ENST00000403681 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
HMGA2-204ENST00000403681 CRBNQ96SW2 442 aa18.04■□□□□ 0.48
HMGA2-204ENST00000403681 BRPF3Q9ULD4 1205 aa18.04■□□□□ 0.48
HMGA2-204ENST00000403681 USP47Q96K76 1375 aa18.04■□□□□ 0.48
HMGA2-204ENST00000403681 SMG6Q86US8 1419 aaKnown RBP18.03■□□□□ 0.48
HMGA2-204ENST00000403681 ST20-MTHFSA0A0A6YYL1 179 aa18.02■□□□□ 0.48
HMGA2-204ENST00000403681 RSPH6AQ9H0K4 717 aa18.02■□□□□ 0.47
HMGA2-204ENST00000403681 FRAT1Q92837 279 aaPredicted RBP18.01■□□□□ 0.47
HMGA2-204ENST00000403681 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
HMGA2-204ENST00000403681 FAM161AQ3B820 660 aa18.01■□□□□ 0.47
HMGA2-204ENST00000403681 HFM1A2PYH4 1435 aa18.01■□□□□ 0.47
HMGA2-204ENST00000403681 BACH2Q9BYV9 841 aa18■□□□□ 0.47
HMGA2-204ENST00000403681 C11orf95C9JLR9 678 aaPredicted RBP18■□□□□ 0.47
HMGA2-204ENST00000403681 NBPF8Q3BBV2 869 aa18■□□□□ 0.47
HMGA2-204ENST00000403681 TDRD9Q8NDG6 1382 aaKnown RBP17.99■□□□□ 0.47
HMGA2-204ENST00000403681 TMF1P82094 1093 aa17.99■□□□□ 0.47
HMGA2-204ENST00000403681 CENPQQ7L2Z9 268 aaPredicted RBP17.98■□□□□ 0.47
HMGA2-204ENST00000403681 CFTRP13569 1480 aa17.98■□□□□ 0.47
HMGA2-204ENST00000403681 PNNQ9H307 717 aaKnown RBP17.98■□□□□ 0.47
HMGA2-204ENST00000403681 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
HMGA2-204ENST00000403681 SPRYD3Q8NCJ5 442 aa17.98■□□□□ 0.47
HMGA2-204ENST00000403681 PLEKHD1A6NEE1 506 aa17.98■□□□□ 0.47
HMGA2-204ENST00000403681 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
HMGA2-204ENST00000403681 PNISRQ8TF01 805 aaKnown RBP17.96■□□□□ 0.47
HMGA2-204ENST00000403681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.96■□□□□ 0.47
HMGA2-204ENST00000403681 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
HMGA2-204ENST00000403681 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
HMGA2-204ENST00000403681 CDCA8Q53HL2 280 aa17.96■□□□□ 0.47
HMGA2-204ENST00000403681 GZF1Q9H116 711 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-204ENST00000403681 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
HMGA2-204ENST00000403681 CUX1P39880 1505 aa17.95■□□□□ 0.46
HMGA2-204ENST00000403681 NUP155O75694 1391 aa17.93■□□□□ 0.46
HMGA2-204ENST00000403681 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
HMGA2-204ENST00000403681 NCOA2Q15596 1464 aa17.93■□□□□ 0.46
HMGA2-204ENST00000403681 FGD5Q6ZNL6 1462 aa17.92■□□□□ 0.46
HMGA2-204ENST00000403681 FYCO1Q9BQS8 1478 aa17.92■□□□□ 0.46
HMGA2-204ENST00000403681 NAIPQ13075 1403 aa17.92■□□□□ 0.46
HMGA2-204ENST00000403681 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
HMGA2-204ENST00000403681 NESP48681 1621 aa17.91■□□□□ 0.46
HMGA2-204ENST00000403681 MAP3K1Q13233 1512 aa17.91■□□□□ 0.46
HMGA2-204ENST00000403681 CDCA7LQ96GN5 454 aa17.91■□□□□ 0.46
HMGA2-204ENST00000403681 ARID4BQ4LE39 1312 aaPredicted RBP17.9■□□□□ 0.46
HMGA2-204ENST00000403681 GOLGA6L3A6NEY3 463 aa17.9■□□□□ 0.46
HMGA2-204ENST00000403681 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
HMGA2-204ENST00000403681 GOLGA6L22H0YM25 854 aa17.89■□□□□ 0.45
HMGA2-204ENST00000403681 FTSJ3Q8IY81 847 aaKnown RBP17.88■□□□□ 0.45
HMGA2-204ENST00000403681 BRD4O60885 1362 aaPredicted RBP17.88■□□□□ 0.45
HMGA2-204ENST00000403681 FRAT2O75474 233 aaPredicted RBP17.87■□□□□ 0.45
HMGA2-204ENST00000403681 CHGAP10645 457 aaKnown RBP17.86■□□□□ 0.45
HMGA2-204ENST00000403681 ANKRD30AQ9BXX3 1397 aa17.86■□□□□ 0.45
HMGA2-204ENST00000403681 HSCBQ8IWL3 235 aa17.84■□□□□ 0.45
HMGA2-204ENST00000403681 CHMP7Q8WUX9 453 aaPredicted RBP17.84■□□□□ 0.45
HMGA2-204ENST00000403681 PANK3Q9H999 370 aa17.84■□□□□ 0.45
HMGA2-204ENST00000403681 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.45
HMGA2-204ENST00000403681 NCOA1Q15788 1441 aa17.83■□□□□ 0.44
HMGA2-204ENST00000403681 CCDC146Q8IYE0 955 aa17.82■□□□□ 0.44
HMGA2-204ENST00000403681 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
HMGA2-204ENST00000403681 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
HMGA2-204ENST00000403681 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
HMGA2-204ENST00000403681 HSP90AA2PQ14568 343 aaPredicted RBP17.8■□□□□ 0.44
HMGA2-204ENST00000403681 ESF1Q9H501 851 aaKnown RBP17.8■□□□□ 0.44
HMGA2-204ENST00000403681 TNNT2P45379 298 aaPredicted RBP17.8■□□□□ 0.44
HMGA2-204ENST00000403681 SKAP1Q86WV1 359 aa17.79■□□□□ 0.44
HMGA2-204ENST00000403681 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
HMGA2-204ENST00000403681 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
HMGA2-204ENST00000403681 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
HMGA2-204ENST00000403681 PCF11O94913 1555 aaKnown RBP17.77■□□□□ 0.44
HMGA2-204ENST00000403681 FAM43AQ8N2R8 423 aa17.77■□□□□ 0.44
HMGA2-204ENST00000403681 MAPK8IP3Q9UPT6 1336 aa17.77■□□□□ 0.44
HMGA2-204ENST00000403681 PMFBP1Q8TBY8 1022 aa17.76■□□□□ 0.43
HMGA2-204ENST00000403681 RWDD1Q9H446 243 aaPredicted RBP17.76■□□□□ 0.43
HMGA2-204ENST00000403681 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
HMGA2-204ENST00000403681 CENPJQ9HC77 1338 aaPredicted RBP17.74■□□□□ 0.43
HMGA2-204ENST00000403681 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
HMGA2-204ENST00000403681 CLUAP1Q96AJ1 413 aa17.73■□□□□ 0.43
HMGA2-204ENST00000403681 COG6Q9Y2V7 657 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms