RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 TMEM106CQ9BVX2 250 aa5.82□□□□□ -1.48
CBX3P9-201ENST00000402326 CABP2Q9NPB3 220 aa5.82□□□□□ -1.48
CBX3P9-201ENST00000402326 GOLGA2Q08379 1002 aa5.81□□□□□ -1.48
CBX3P9-201ENST00000402326 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.81□□□□□ -1.48
CBX3P9-201ENST00000402326 TRPC6Q9Y210 931 aa5.81□□□□□ -1.48
CBX3P9-201ENST00000402326 SOX12O15370 315 aa5.8□□□□□ -1.48
CBX3P9-201ENST00000402326 Q6ZNB5 142 aa5.8□□□□□ -1.48
CBX3P9-201ENST00000402326 VSIG10Q8N0Z9 540 aa5.8□□□□□ -1.48
CBX3P9-201ENST00000402326 EFCAB3Q8N7B9 438 aa5.8□□□□□ -1.48
CBX3P9-201ENST00000402326 TSHZ2Q9NRE2 1034 aa5.79□□□□□ -1.48
CBX3P9-201ENST00000402326 TTLL13PA6NNM8 815 aa5.78□□□□□ -1.48
CBX3P9-201ENST00000402326 NLRP6P59044 892 aa5.78□□□□□ -1.48
CBX3P9-201ENST00000402326 MFRPQ9BY79 579 aa5.78□□□□□ -1.48
CBX3P9-201ENST00000402326 MKRN3Q13064 507 aaKnown RBP5.77□□□□□ -1.49
CBX3P9-201ENST00000402326 PHF8Q9UPP1 1060 aa5.76□□□□□ -1.49
CBX3P9-201ENST00000402326 PLCG2P16885 1265 aa5.75□□□□□ -1.49
CBX3P9-201ENST00000402326 FBXO22Q8NEZ5 403 aa5.75□□□□□ -1.49
CBX3P9-201ENST00000402326 TRIM35Q9UPQ4 493 aa5.75□□□□□ -1.49
CBX3P9-201ENST00000402326 KDM2AQ9Y2K7 1162 aa5.74□□□□□ -1.49
CBX3P9-201ENST00000402326 HCSTQ9UBK5 93 aa5.72□□□□□ -1.49
CBX3P9-201ENST00000402326 ERBB3P21860 1342 aa5.72□□□□□ -1.49
CBX3P9-201ENST00000402326 PPP1R37O75864 691 aa5.71□□□□□ -1.5
CBX3P9-201ENST00000402326 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.71□□□□□ -1.5
CBX3P9-201ENST00000402326 MS4A4AQ96JQ5 239 aa5.7□□□□□ -1.5
CBX3P9-201ENST00000402326 ILDR1Q86SU0 546 aaPredicted RBP5.69□□□□□ -1.5
CBX3P9-201ENST00000402326 OCEL1Q9H607 264 aa5.67□□□□□ -1.5
CBX3P9-201ENST00000402326 IRX5P78411 483 aaPredicted RBP5.66□□□□□ -1.5
CBX3P9-201ENST00000402326 CADPS2Q86UW7 1296 aa5.66□□□□□ -1.5
CBX3P9-201ENST00000402326 PDCD7Q8N8D1 485 aaKnown RBP5.65□□□□□ -1.5
CBX3P9-201ENST00000402326 WDR70Q9NW82 654 aa5.65□□□□□ -1.5
CBX3P9-201ENST00000402326 DPY19L2Q6NUT2 758 aa5.64□□□□□ -1.51
CBX3P9-201ENST00000402326 G3V3G9 751 aa5.63□□□□□ -1.51
CBX3P9-201ENST00000402326 PDE4AP27815 886 aa5.63□□□□□ -1.51
CBX3P9-201ENST00000402326 ANKRD13DQ6ZTN6 518 aa5.63□□□□□ -1.51
CBX3P9-201ENST00000402326 BCANQ96GW7 911 aa5.63□□□□□ -1.51
CBX3P9-201ENST00000402326 HOXB1P14653 301 aaPredicted RBP5.61□□□□□ -1.51
CBX3P9-201ENST00000402326 ZNF687Q8N1G0 1237 aa5.61□□□□□ -1.51
CBX3P9-201ENST00000402326 L3MBTL3Q96JM7 780 aaPredicted RBP5.61□□□□□ -1.51
CBX3P9-201ENST00000402326 BOLA1Q9Y3E2 137 aa5.61□□□□□ -1.51
CBX3P9-201ENST00000402326 VARS2Q5ST30 1063 aaKnown RBP5.6□□□□□ -1.51
CBX3P9-201ENST00000402326 MICALL2Q8IY33 904 aa5.6□□□□□ -1.51
CBX3P9-201ENST00000402326 LARP6Q9BRS8 491 aaKnown RBP5.6□□□□□ -1.51
CBX3P9-201ENST00000402326 NCKAP5LQ9HCH0 1330 aa5.59□□□□□ -1.51
CBX3P9-201ENST00000402326 P3H3Q8IVL6 736 aa5.59□□□□□ -1.51
CBX3P9-201ENST00000402326 CRISPLD2Q9H0B8 497 aa5.59□□□□□ -1.51
CBX3P9-201ENST00000402326 C3orf67Q6ZVT6 689 aa5.58□□□□□ -1.52
CBX3P9-201ENST00000402326 NBR1Q14596 966 aa5.57□□□□□ -1.52
CBX3P9-201ENST00000402326 MFSD10Q14728 455 aa5.57□□□□□ -1.52
CBX3P9-201ENST00000402326 DDX27Q96GQ7 796 aaKnown RBP5.57□□□□□ -1.52
CBX3P9-201ENST00000402326 GPHNQ9NQX3 736 aaPredicted RBP5.57□□□□□ -1.52
CBX3P9-201ENST00000402326 PRKCSHP14314 528 aaPredicted RBP5.56□□□□□ -1.52
CBX3P9-201ENST00000402326 E2F4Q16254 413 aa5.56□□□□□ -1.52
CBX3P9-201ENST00000402326 TMC2Q8TDI7 906 aa5.56□□□□□ -1.52
CBX3P9-201ENST00000402326 ZNF710Q8N1W2 664 aa5.55□□□□□ -1.52
CBX3P9-201ENST00000402326 KCNV2Q8TDN2 545 aa5.55□□□□□ -1.52
CBX3P9-201ENST00000402326 ZNF775Q96BV0 537 aaPredicted RBP5.54□□□□□ -1.52
CBX3P9-201ENST00000402326 FOXK1P85037 733 aa5.53□□□□□ -1.52
CBX3P9-201ENST00000402326 PPP1R15BQ5SWA1 713 aa5.53□□□□□ -1.52
CBX3P9-201ENST00000402326 TRAF7Q6Q0C0 670 aa5.53□□□□□ -1.52
CBX3P9-201ENST00000402326 ARHGEF1Q92888 912 aaKnown RBP5.53□□□□□ -1.52
CBX3P9-201ENST00000402326 C2orf72A6NCS6 295 aa5.52□□□□□ -1.53
CBX3P9-201ENST00000402326 DSG2Q14126 1118 aa5.52□□□□□ -1.53
CBX3P9-201ENST00000402326 KIF3CO14782 793 aa5.51□□□□□ -1.53
CBX3P9-201ENST00000402326 CAMK2BQ13554 666 aa5.51□□□□□ -1.53
CBX3P9-201ENST00000402326 IFFO2Q5TF58 517 aa5.51□□□□□ -1.53
CBX3P9-201ENST00000402326 ZNF787Q6DD87 383 aa5.5□□□□□ -1.53
CBX3P9-201ENST00000402326 TMEM92Q6UXU6 159 aa5.5□□□□□ -1.53
CBX3P9-201ENST00000402326 PLPP6Q8IY26 295 aa5.5□□□□□ -1.53
CBX3P9-201ENST00000402326 ARIH1Q9Y4X5 557 aaPredicted RBP5.49□□□□□ -1.53
CBX3P9-201ENST00000402326 LCE2BO14633 110 aa5.48□□□□□ -1.53
CBX3P9-201ENST00000402326 HOXB3P14651 431 aaPredicted RBP5.48□□□□□ -1.53
CBX3P9-201ENST00000402326 LAPTM4AQ15012 233 aa5.48□□□□□ -1.53
CBX3P9-201ENST00000402326 SUZ12Q15022 739 aaKnown RBP5.47□□□□□ -1.53
CBX3P9-201ENST00000402326 TPRNQ4KMQ1 711 aa5.47□□□□□ -1.53
CBX3P9-201ENST00000402326 EMILIN3Q9NT22 766 aa5.46□□□□□ -1.54
CBX3P9-201ENST00000402326 A0A0G2JS52 829 aa5.45□□□□□ -1.54
CBX3P9-201ENST00000402326 TULP1O00294 542 aaPredicted RBP5.45□□□□□ -1.54
CBX3P9-201ENST00000402326 LSM11P83369 360 aaKnown RBP eCLIP5.45□□□□□ -1.54
CBX3P9-201ENST00000402326 DPYSL4O14531 572 aa5.44□□□□□ -1.54
CBX3P9-201ENST00000402326 SEMA3EO15041 775 aa5.44□□□□□ -1.54
CBX3P9-201ENST00000402326 MAP3K9P80192 1104 aa5.44□□□□□ -1.54
CBX3P9-201ENST00000402326 SPDYE16A6NNV3 312 aaPredicted RBP5.43□□□□□ -1.54
CBX3P9-201ENST00000402326 SMYD5Q6GMV2 418 aa5.43□□□□□ -1.54
CBX3P9-201ENST00000402326 TESPA1A2RU30 521 aaPredicted RBP5.42□□□□□ -1.54
CBX3P9-201ENST00000402326 TBC1D12O60347 775 aa5.42□□□□□ -1.54
CBX3P9-201ENST00000402326 SLC34A2O95436 690 aa5.42□□□□□ -1.54
CBX3P9-201ENST00000402326 DOK7Q18PE1 504 aa5.42□□□□□ -1.54
CBX3P9-201ENST00000402326 OXER1Q8TDS5 423 aa5.42□□□□□ -1.54
CBX3P9-201ENST00000402326 UPF1Q92900 1129 aaKnown RBP eCLIP5.42□□□□□ -1.54
CBX3P9-201ENST00000402326 PDIA6Q15084 440 aa5.41□□□□□ -1.54
CBX3P9-201ENST00000402326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.41□□□□□ -1.54
CBX3P9-201ENST00000402326 PTCD2Q8WV60 388 aaKnown RBP5.41□□□□□ -1.54
CBX3P9-201ENST00000402326 LMOD2Q6P5Q4 547 aa5.39□□□□□ -1.55
CBX3P9-201ENST00000402326 STK17AQ9UEE5 414 aa5.39□□□□□ -1.55
CBX3P9-201ENST00000402326 ZNF316A6NFI3 1004 aaPredicted RBP5.38□□□□□ -1.55
CBX3P9-201ENST00000402326 RIMBP2O15034 1052 aa5.38□□□□□ -1.55
CBX3P9-201ENST00000402326 EVI5O60447 810 aa5.38□□□□□ -1.55
CBX3P9-201ENST00000402326 MLLT3P42568 568 aaPredicted RBP5.38□□□□□ -1.55
CBX3P9-201ENST00000402326 PCDHGA4Q9Y5G9 962 aa5.37□□□□□ -1.55
CBX3P9-201ENST00000402326 ANO8Q9HCE9 1232 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms