RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
CBX3P9-201ENST00000402326 POTEDQ86YR6 584 aa12.95□□□□□ -0.34
CBX3P9-201ENST00000402326 CHIC1Q5VXU3 224 aa12.71□□□□□ -0.37
CBX3P9-201ENST00000402326 SENP3Q9H4L4 574 aaPredicted RBP11.84□□□□□ -0.51
CBX3P9-201ENST00000402326 PHF23Q9BUL5 403 aaPredicted RBP11.46□□□□□ -0.57
CBX3P9-201ENST00000402326 FOXD1Q16676 465 aa11.13□□□□□ -0.63
CBX3P9-201ENST00000402326 MSH5O43196 834 aa11.02□□□□□ -0.65
CBX3P9-201ENST00000402326 CACNB1Q02641 598 aaPredicted RBP10.24□□□□□ -0.77
CBX3P9-201ENST00000402326 PIAS4Q8N2W9 510 aaPredicted RBP10.09□□□□□ -0.79
CBX3P9-201ENST00000402326 POTEHQ6S545 545 aa9.9□□□□□ -0.82
CBX3P9-201ENST00000402326 PPP6R1Q9UPN7 881 aa9.35□□□□□ -0.91
CBX3P9-201ENST00000402326 PLPPR3Q6T4P5 718 aa9.32□□□□□ -0.92
CBX3P9-201ENST00000402326 ADRA2BP18089 450 aa9.24□□□□□ -0.93
CBX3P9-201ENST00000402326 RNF39Q9H2S5 420 aa9.24□□□□□ -0.93
CBX3P9-201ENST00000402326 DMRT2Q9Y5R5 561 aa9.15□□□□□ -0.94
CBX3P9-201ENST00000402326 C1QBPQ07021 282 aaKnown RBP9.07□□□□□ -0.96
CBX3P9-201ENST00000402326 DCAF8L1A6NGE4 600 aa8.92□□□□□ -0.98
CBX3P9-201ENST00000402326 MAPK8IP2Q13387 824 aaPredicted RBP8.88□□□□□ -0.99
CBX3P9-201ENST00000402326 PLSCR2Q9NRY7 297 aa8.8□□□□□ -1
CBX3P9-201ENST00000402326 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
CBX3P9-201ENST00000402326 SCAF1Q9H7N4 1312 aaKnown RBP8.61□□□□□ -1.03
CBX3P9-201ENST00000402326 DNAJC5BQ9UF47 199 aa8.38□□□□□ -1.07
CBX3P9-201ENST00000402326 HOXD11P31277 338 aaPredicted RBP8.31□□□□□ -1.08
CBX3P9-201ENST00000402326 CHRDL2Q6WN34 429 aa8.22□□□□□ -1.09
CBX3P9-201ENST00000402326 PPP4R3CPQ6ZMV5 832 aa8.22□□□□□ -1.09
CBX3P9-201ENST00000402326 DSG3P32926 999 aa8.19□□□□□ -1.1
CBX3P9-201ENST00000402326 KCNA4P22459 653 aa8.15□□□□□ -1.1
CBX3P9-201ENST00000402326 LHX8Q68G74 356 aa8.11□□□□□ -1.11
CBX3P9-201ENST00000402326 NCBP3Q53F19 620 aaKnown RBP8.07□□□□□ -1.12
CBX3P9-201ENST00000402326 HAX1O00165 279 aa7.98□□□□□ -1.13
CBX3P9-201ENST00000402326 CNKSR2Q8WXI2 1034 aa7.98□□□□□ -1.13
CBX3P9-201ENST00000402326 CAPN15O75808 1086 aa7.95□□□□□ -1.14
CBX3P9-201ENST00000402326 NPM3O75607 178 aaKnown RBP7.92□□□□□ -1.14
CBX3P9-201ENST00000402326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.92□□□□□ -1.14
CBX3P9-201ENST00000402326 RBM42Q9BTD8 480 aaKnown RBP7.92□□□□□ -1.14
CBX3P9-201ENST00000402326 RNF216Q9NWF9 866 aaPredicted RBP7.9□□□□□ -1.14
CBX3P9-201ENST00000402326 SPINK5Q9NQ38 1064 aaPredicted RBP7.81□□□□□ -1.16
CBX3P9-201ENST00000402326 SLC4A1APQ9BWU0 796 aaKnown RBP7.8□□□□□ -1.16
CBX3P9-201ENST00000402326 PCDH10Q9P2E7 1040 aa7.76□□□□□ -1.17
CBX3P9-201ENST00000402326 PIP4P2Q8N4L2 257 aa7.71□□□□□ -1.18
CBX3P9-201ENST00000402326 POTEMA6NI47 508 aa7.7□□□□□ -1.18
CBX3P9-201ENST00000402326 EHMT2Q96KQ7 1210 aa7.7□□□□□ -1.18
CBX3P9-201ENST00000402326 EVX2Q03828 476 aa7.69□□□□□ -1.18
CBX3P9-201ENST00000402326 POTEGQ6S5H5 508 aa7.62□□□□□ -1.19
CBX3P9-201ENST00000402326 ABCB7O75027 752 aa7.61□□□□□ -1.19
CBX3P9-201ENST00000402326 CSRNP3Q8WYN3 585 aa7.56□□□□□ -1.2
CBX3P9-201ENST00000402326 U3KPZ7 1027 aaPredicted RBP7.55□□□□□ -1.2
CBX3P9-201ENST00000402326 GABBR2O75899 941 aa7.5□□□□□ -1.21
CBX3P9-201ENST00000402326 ZBTB22O15209 634 aa7.49□□□□□ -1.21
CBX3P9-201ENST00000402326 TRHP20396 242 aaPredicted RBP7.49□□□□□ -1.21
CBX3P9-201ENST00000402326 FXR2P51116 673 aaKnown RBP eCLIP7.48□□□□□ -1.21
CBX3P9-201ENST00000402326 FOXD4L1Q9NU39 408 aa7.48□□□□□ -1.21
CBX3P9-201ENST00000402326 ZNF219Q9P2Y4 722 aaPredicted RBP7.45□□□□□ -1.22
CBX3P9-201ENST00000402326 SLC4A2P04920 1241 aa7.44□□□□□ -1.22
CBX3P9-201ENST00000402326 AKT1S1Q96B36 256 aa7.43□□□□□ -1.22
CBX3P9-201ENST00000402326 APLP2Q06481 763 aa7.33□□□□□ -1.24
CBX3P9-201ENST00000402326 MYCNP04198 464 aaPredicted RBP7.32□□□□□ -1.24
CBX3P9-201ENST00000402326 REM2Q8IYK8 340 aaPredicted RBP7.32□□□□□ -1.24
CBX3P9-201ENST00000402326 POTEIP0CG38 1075 aa7.29□□□□□ -1.24
CBX3P9-201ENST00000402326 OTUD5Q96G74 571 aa7.29□□□□□ -1.24
CBX3P9-201ENST00000402326 C19orf67A6NJJ6 358 aa7.28□□□□□ -1.24
CBX3P9-201ENST00000402326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.23□□□□□ -1.25
CBX3P9-201ENST00000402326 PITPNM1O00562 1244 aa7.23□□□□□ -1.25
CBX3P9-201ENST00000402326 ATXN8OSP0DMR3 200 aa7.23□□□□□ -1.25
CBX3P9-201ENST00000402326 HNRNPUL2Q1KMD3 747 aaKnown RBP7.23□□□□□ -1.25
CBX3P9-201ENST00000402326 SAMD1Q6SPF0 538 aaPredicted RBP7.2□□□□□ -1.26
CBX3P9-201ENST00000402326 ATF5Q9Y2D1 282 aaPredicted RBP7.1□□□□□ -1.27
CBX3P9-201ENST00000402326 CLCN6P51797 869 aa7.07□□□□□ -1.28
CBX3P9-201ENST00000402326 DCBLD2Q96PD2 775 aa7.06□□□□□ -1.28
CBX3P9-201ENST00000402326 PRKAR2AP13861 404 aaKnown RBP7.05□□□□□ -1.28
CBX3P9-201ENST00000402326 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
CBX3P9-201ENST00000402326 CDAN1Q8IWY9 1227 aa7.03□□□□□ -1.28
CBX3P9-201ENST00000402326 FAM163AQ96GL9 167 aaPredicted RBP7.03□□□□□ -1.28
CBX3P9-201ENST00000402326 POTEB2H3BUK9 544 aa7.01□□□□□ -1.29
CBX3P9-201ENST00000402326 MMRN1Q13201 1228 aa7.01□□□□□ -1.29
CBX3P9-201ENST00000402326 POLA2Q14181 598 aa6.96□□□□□ -1.3
CBX3P9-201ENST00000402326 SPNS2Q8IVW8 549 aa6.88□□□□□ -1.31
CBX3P9-201ENST00000402326 FBLN2P98095 1184 aa6.83□□□□□ -1.32
CBX3P9-201ENST00000402326 FKBP8Q14318 412 aa6.83□□□□□ -1.32
CBX3P9-201ENST00000402326 MAMSTRQ6ZN01 415 aa6.83□□□□□ -1.32
CBX3P9-201ENST00000402326 ZBTB12Q9Y330 459 aaPredicted RBP6.81□□□□□ -1.32
CBX3P9-201ENST00000402326 MKRN4PQ13434 485 aaPredicted RBP6.79□□□□□ -1.32
CBX3P9-201ENST00000402326 OSCARQ8IYS5 282 aa6.77□□□□□ -1.33
CBX3P9-201ENST00000402326 CD44P16070 742 aaKnown RBP6.75□□□□□ -1.33
CBX3P9-201ENST00000402326 CLEC11AQ9Y240 323 aa6.73□□□□□ -1.33
CBX3P9-201ENST00000402326 SPDYE4A6NLX3 237 aa6.72□□□□□ -1.33
CBX3P9-201ENST00000402326 POTEJP0CG39 1038 aa6.68□□□□□ -1.34
CBX3P9-201ENST00000402326 CHADLQ6NUI6 762 aa6.67□□□□□ -1.34
CBX3P9-201ENST00000402326 SCUBE2Q9NQ36 999 aa6.67□□□□□ -1.34
CBX3P9-201ENST00000402326 SPDYE1Q8NFV5 336 aaPredicted RBP6.66□□□□□ -1.34
CBX3P9-201ENST00000402326 SPDYE2BA6NHP3 402 aa6.62□□□□□ -1.35
CBX3P9-201ENST00000402326 SPDYE6P0CI01 402 aa6.62□□□□□ -1.35
CBX3P9-201ENST00000402326 SPDYE2Q495Y8 402 aa6.62□□□□□ -1.35
CBX3P9-201ENST00000402326 ZNF692Q9BU19 519 aaPredicted RBP6.62□□□□□ -1.35
CBX3P9-201ENST00000402326 PROM2Q8N271 834 aa6.61□□□□□ -1.35
CBX3P9-201ENST00000402326 ZNF579Q8NAF0 562 aaKnown RBP6.6□□□□□ -1.35
CBX3P9-201ENST00000402326 FBXO3Q9UK99 471 aa6.59□□□□□ -1.35
CBX3P9-201ENST00000402326 SSUH2Q9Y2M2 353 aa6.57□□□□□ -1.36
CBX3P9-201ENST00000402326 GALR2O43603 387 aaPredicted RBP6.56□□□□□ -1.36
CBX3P9-201ENST00000402326 METRNQ9UJH8 293 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms