RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 IGF1RP08069 1367 aa15.63■□□□□ 0.09
MSL3-207ENST00000398527 CLIP1P30622 1438 aa15.62■□□□□ 0.09
MSL3-207ENST00000398527 RAPGEF2Q9Y4G8 1499 aa15.61■□□□□ 0.09
MSL3-207ENST00000398527 FBXO3Q9UK99 471 aa15.61■□□□□ 0.09
MSL3-207ENST00000398527 PRXQ9BXM0 1461 aa15.61■□□□□ 0.09
MSL3-207ENST00000398527 WDR7Q9Y4E6 1490 aa15.61■□□□□ 0.09
MSL3-207ENST00000398527 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
MSL3-207ENST00000398527 DHX37Q8IY37 1157 aaKnown RBP15.6■□□□□ 0.09
MSL3-207ENST00000398527 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
MSL3-207ENST00000398527 IQGAP2Q13576 1575 aa15.59■□□□□ 0.09
MSL3-207ENST00000398527 SAMD1Q6SPF0 538 aaPredicted RBP15.58■□□□□ 0.08
MSL3-207ENST00000398527 CD109Q6YHK3 1445 aa15.58■□□□□ 0.08
MSL3-207ENST00000398527 DISP1Q96F81 1524 aa15.57■□□□□ 0.08
MSL3-207ENST00000398527 BRD2P25440 801 aaKnown RBP15.57■□□□□ 0.08
MSL3-207ENST00000398527 CERKQ8TCT0 537 aa15.56■□□□□ 0.08
MSL3-207ENST00000398527 SALL2Q9Y467 1007 aaPredicted RBP15.56■□□□□ 0.08
MSL3-207ENST00000398527 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
MSL3-207ENST00000398527 ARAP3Q8WWN8 1544 aa15.53■□□□□ 0.08
MSL3-207ENST00000398527 BCORL1Q5H9F3 1711 aa15.51■□□□□ 0.07
MSL3-207ENST00000398527 MADDQ8WXG6 1647 aa15.51■□□□□ 0.07
MSL3-207ENST00000398527 SPATA31D1Q6ZQQ2 1576 aa15.5■□□□□ 0.07
MSL3-207ENST00000398527 CARMIL1Q5VZK9 1371 aa15.5■□□□□ 0.07
MSL3-207ENST00000398527 CCDC136Q96JN2 1154 aa15.49■□□□□ 0.07
MSL3-207ENST00000398527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
MSL3-207ENST00000398527 UGGT2Q9NYU1 1516 aa15.48■□□□□ 0.07
MSL3-207ENST00000398527 KIAA0556O60303 1618 aa15.46■□□□□ 0.07
MSL3-207ENST00000398527 HSPA2P54652 639 aa15.44■□□□□ 0.06
MSL3-207ENST00000398527 KCNH8Q96L42 1107 aa15.44■□□□□ 0.06
MSL3-207ENST00000398527 ERICH6BQ5W0A0 696 aa15.44■□□□□ 0.06
MSL3-207ENST00000398527 RIMS1Q86UR5 1692 aaKnown RBP15.43■□□□□ 0.06
MSL3-207ENST00000398527 PHLDB1Q86UU1 1377 aa15.42■□□□□ 0.06
MSL3-207ENST00000398527 CNKSR2Q8WXI2 1034 aa15.4■□□□□ 0.06
MSL3-207ENST00000398527 AAMPQ13685 434 aa15.39■□□□□ 0.05
MSL3-207ENST00000398527 ABCA8O94911 1581 aa15.38■□□□□ 0.05
MSL3-207ENST00000398527 ARID4BQ4LE39 1312 aaPredicted RBP15.38■□□□□ 0.05
MSL3-207ENST00000398527 A0A0U1RQG5 324 aaPredicted RBP15.38■□□□□ 0.05
MSL3-207ENST00000398527 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
MSL3-207ENST00000398527 FRMPD1Q5SYB0 1578 aa15.36■□□□□ 0.05
MSL3-207ENST00000398527 MAP3K1Q13233 1512 aa15.36■□□□□ 0.05
MSL3-207ENST00000398527 RAPGEF3O95398 923 aa15.35■□□□□ 0.05
MSL3-207ENST00000398527 CLSPNQ9HAW4 1339 aa15.35■□□□□ 0.05
MSL3-207ENST00000398527 TMEM132AQ24JP5 1023 aa15.34■□□□□ 0.05
MSL3-207ENST00000398527 ARHGEF40Q8TER5 1519 aa15.33■□□□□ 0.04
MSL3-207ENST00000398527 ABCA9Q8IUA7 1624 aa15.33■□□□□ 0.04
MSL3-207ENST00000398527 NEO1Q92859 1461 aa15.33■□□□□ 0.04
MSL3-207ENST00000398527 RRBP1Q9P2E9 1410 aaKnown RBP15.31■□□□□ 0.04
MSL3-207ENST00000398527 ARHGAP35Q9NRY4 1499 aa15.3■□□□□ 0.04
MSL3-207ENST00000398527 CDK11BP21127 795 aaKnown RBP15.28■□□□□ 0.04
MSL3-207ENST00000398527 RSPH4AQ5TD94 716 aa15.28■□□□□ 0.04
MSL3-207ENST00000398527 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
MSL3-207ENST00000398527 RSPH6AQ9H0K4 717 aa15.27■□□□□ 0.04
MSL3-207ENST00000398527 POGZQ7Z3K3 1410 aa15.27■□□□□ 0.03
MSL3-207ENST00000398527 FANCAO15360 1455 aa15.26■□□□□ 0.03
MSL3-207ENST00000398527 YEATS2Q9ULM3 1422 aa15.25■□□□□ 0.03
MSL3-207ENST00000398527 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
MSL3-207ENST00000398527 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
MSL3-207ENST00000398527 PAXIP1Q6ZW49 1069 aaPredicted RBP15.25■□□□□ 0.03
MSL3-207ENST00000398527 DMRT2Q9Y5R5 561 aa15.25■□□□□ 0.03
MSL3-207ENST00000398527 PREX1Q8TCU6 1659 aa15.24■□□□□ 0.03
MSL3-207ENST00000398527 STRCQ7RTU9 1775 aa15.24■□□□□ 0.03
MSL3-207ENST00000398527 ZNF316A6NFI3 1004 aaPredicted RBP15.23■□□□□ 0.03
MSL3-207ENST00000398527 ATP10BO94823 1461 aa15.23■□□□□ 0.03
MSL3-207ENST00000398527 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
MSL3-207ENST00000398527 FER1L4A9Z1Z3 1794 aa15.22■□□□□ 0.03
MSL3-207ENST00000398527 AKNAQ7Z591 1439 aa15.22■□□□□ 0.03
MSL3-207ENST00000398527 CTTNBP2Q8WZ74 1663 aa15.22■□□□□ 0.03
MSL3-207ENST00000398527 SIGLEC1Q9BZZ2 1709 aa15.21■□□□□ 0.03
MSL3-207ENST00000398527 RBM10P98175 930 aaKnown RBP15.21■□□□□ 0.02
MSL3-207ENST00000398527 DENND4BO75064 1496 aaPredicted RBP15.2■□□□□ 0.02
MSL3-207ENST00000398527 IQSEC2Q5JU85 1478 aa15.2■□□□□ 0.02
MSL3-207ENST00000398527 FHOD3Q2V2M9 1422 aa15.2■□□□□ 0.02
MSL3-207ENST00000398527 TIAM1Q13009 1591 aa15.18■□□□□ 0.02
MSL3-207ENST00000398527 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
MSL3-207ENST00000398527 PLCB2Q00722 1185 aa15.17■□□□□ 0.02
MSL3-207ENST00000398527 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
MSL3-207ENST00000398527 PTPRTO14522 1441 aa15.17■□□□□ 0.02
MSL3-207ENST00000398527 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
MSL3-207ENST00000398527 ZFYVE16Q7Z3T8 1539 aa15.17■□□□□ 0.02
MSL3-207ENST00000398527 ARID3CA6NKF2 412 aa15.16■□□□□ 0.02
MSL3-207ENST00000398527 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
MSL3-207ENST00000398527 LTBP4Q8N2S1 1624 aa15.16■□□□□ 0.02
MSL3-207ENST00000398527 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
MSL3-207ENST00000398527 ARHGEF12Q9NZN5 1544 aa15.14■□□□□ 0.01
MSL3-207ENST00000398527 DHX57Q6P158 1386 aaKnown RBP15.14■□□□□ 0.01
MSL3-207ENST00000398527 CCNB3Q8WWL7 1395 aa15.14■□□□□ 0.01
MSL3-207ENST00000398527 CFAP74Q9C0B2 1584 aa15.13■□□□□ 0.01
MSL3-207ENST00000398527 MLECQ14165 292 aa15.13■□□□□ 0.01
MSL3-207ENST00000398527 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
MSL3-207ENST00000398527 DEKP35659 375 aaKnown RBP15.12■□□□□ 0.01
MSL3-207ENST00000398527 KANK4Q5T7N3 995 aaPredicted RBP15.12■□□□□ 0.01
MSL3-207ENST00000398527 UHRF1BP1Q6BDS2 1440 aa15.11■□□□□ 0.01
MSL3-207ENST00000398527 NAP1L5Q96NT1 182 aaPredicted RBP15.11■□□□□ 0.01
MSL3-207ENST00000398527 ZMYND15Q9H091 742 aa15.09■□□□□ 0.01
MSL3-207ENST00000398527 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.09■□□□□ 0.01
MSL3-207ENST00000398527 LRRC9Q6ZRR7 1453 aa15.09■□□□□ 0.01
MSL3-207ENST00000398527 GLIPR1L2Q4G1C9 344 aa15.08■□□□□ 0
MSL3-207ENST00000398527 CEBPAP49715 358 aaPredicted RBP15.07■□□□□ 0
MSL3-207ENST00000398527 FYCO1Q9BQS8 1478 aa15.07■□□□□ 0
MSL3-207ENST00000398527 HECW1Q76N89 1606 aa15.07■□□□□ 0
MSL3-207ENST00000398527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms