RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 PCF11O94913 1555 aaKnown RBP22.66■■□□□ 1.22
PTPA-207ENST00000393370 NAIPQ13075 1403 aa22.66■■□□□ 1.22
PTPA-207ENST00000393370 P3H3Q8IVL6 736 aa22.65■■□□□ 1.22
PTPA-207ENST00000393370 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
PTPA-207ENST00000393370 FRAT2O75474 233 aaPredicted RBP22.65■■□□□ 1.22
PTPA-207ENST00000393370 CUX1P39880 1505 aa22.63■■□□□ 1.21
PTPA-207ENST00000393370 L3MBTL2Q969R5 705 aa22.63■■□□□ 1.21
PTPA-207ENST00000393370 RRAGDQ9NQL2 400 aaPredicted RBP22.61■■□□□ 1.21
PTPA-207ENST00000393370 NESP48681 1621 aa22.61■■□□□ 1.21
PTPA-207ENST00000393370 DAXXQ9UER7 740 aaPredicted RBP22.6■■□□□ 1.21
PTPA-207ENST00000393370 FMN1Q68DA7 1419 aa22.59■■□□□ 1.21
PTPA-207ENST00000393370 PNISRQ8TF01 805 aaKnown RBP22.59■■□□□ 1.21
PTPA-207ENST00000393370 DHX29Q7Z478 1369 aaKnown RBP22.58■■□□□ 1.21
PTPA-207ENST00000393370 DENND4BO75064 1496 aaPredicted RBP22.57■■□□□ 1.2
PTPA-207ENST00000393370 RCAN3Q9UKA8 241 aa22.56■■□□□ 1.2
PTPA-207ENST00000393370 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
PTPA-207ENST00000393370 NBPF8Q3BBV2 869 aa22.55■■□□□ 1.2
PTPA-207ENST00000393370 CADPSQ9ULU8 1353 aa22.53■■□□□ 1.2
PTPA-207ENST00000393370 SPATA31E1Q6ZUB1 1445 aa22.53■■□□□ 1.2
PTPA-207ENST00000393370 IGF1RP08069 1367 aa22.53■■□□□ 1.2
PTPA-207ENST00000393370 TMC1Q8TDI8 760 aa22.5■■□□□ 1.19
PTPA-207ENST00000393370 RRP7BPQ9NSQ0 103 aa22.48■■□□□ 1.19
PTPA-207ENST00000393370 POLR3GLQ9BT43 218 aa22.47■■□□□ 1.19
PTPA-207ENST00000393370 FHOD3Q2V2M9 1422 aa22.47■■□□□ 1.19
PTPA-207ENST00000393370 FOXD1Q16676 465 aa22.47■■□□□ 1.19
PTPA-207ENST00000393370 HSP90AA2PQ14568 343 aaPredicted RBP22.46■■□□□ 1.19
PTPA-207ENST00000393370 CFTRP13569 1480 aa22.46■■□□□ 1.19
PTPA-207ENST00000393370 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
PTPA-207ENST00000393370 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.19
PTPA-207ENST00000393370 POGKQ9P215 609 aa22.45■■□□□ 1.19
PTPA-207ENST00000393370 CARMIL1Q5VZK9 1371 aa22.44■■□□□ 1.18
PTPA-207ENST00000393370 PLIN1O60240 522 aa22.44■■□□□ 1.18
PTPA-207ENST00000393370 NAP1L5Q96NT1 182 aaPredicted RBP22.44■■□□□ 1.18
PTPA-207ENST00000393370 CASKIN1Q8WXD9 1431 aa22.41■■□□□ 1.18
PTPA-207ENST00000393370 LRPPRCP42704 1394 aaKnown RBP22.41■■□□□ 1.18
PTPA-207ENST00000393370 MPHOSPH9Q99550 1183 aa22.41■■□□□ 1.18
PTPA-207ENST00000393370 RRP9O43818 475 aaKnown RBP22.4■■□□□ 1.18
PTPA-207ENST00000393370 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
PTPA-207ENST00000393370 HECW1Q76N89 1606 aa22.4■■□□□ 1.18
PTPA-207ENST00000393370 CRBNQ96SW2 442 aa22.4■■□□□ 1.18
PTPA-207ENST00000393370 PLEKHG5O94827 1062 aa22.39■■□□□ 1.18
PTPA-207ENST00000393370 C8orf34Q49A92 452 aa22.38■■□□□ 1.17
PTPA-207ENST00000393370 PODXL2Q9NZ53 605 aa22.38■■□□□ 1.17
PTPA-207ENST00000393370 HSP90AA1P07900 732 aaKnown RBP22.38■■□□□ 1.17
PTPA-207ENST00000393370 MTUS2Q5JR59 1369 aa22.38■■□□□ 1.17
PTPA-207ENST00000393370 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
PTPA-207ENST00000393370 FGD5Q6ZNL6 1462 aa22.35■■□□□ 1.17
PTPA-207ENST00000393370 PNNQ9H307 717 aaKnown RBP22.35■■□□□ 1.17
PTPA-207ENST00000393370 CDCA7LQ96GN5 454 aa22.34■■□□□ 1.17
PTPA-207ENST00000393370 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
PTPA-207ENST00000393370 MYOM3Q5VTT5 1437 aa22.33■■□□□ 1.17
PTPA-207ENST00000393370 KDM6BO15054 1643 aa22.33■■□□□ 1.17
PTPA-207ENST00000393370 L1TD1Q5T7N2 865 aaKnown RBP22.32■■□□□ 1.16
PTPA-207ENST00000393370 KDM2BQ8NHM5 1336 aa22.31■■□□□ 1.16
PTPA-207ENST00000393370 MIA2Q96PC5 1412 aa22.31■■□□□ 1.16
PTPA-207ENST00000393370 RPRD2Q5VT52 1461 aaKnown RBP22.31■■□□□ 1.16
PTPA-207ENST00000393370 BCORL1Q5H9F3 1711 aa22.3■■□□□ 1.16
PTPA-207ENST00000393370 CLCN1P35523 988 aa22.29■■□□□ 1.16
PTPA-207ENST00000393370 ARXQ96QS3 562 aa22.29■■□□□ 1.16
PTPA-207ENST00000393370 KTN1Q86UP2 1357 aaKnown RBP22.29■■□□□ 1.16
PTPA-207ENST00000393370 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
PTPA-207ENST00000393370 PDE3BQ13370 1112 aa22.28■■□□□ 1.16
PTPA-207ENST00000393370 C20orf194Q5TEA3 1177 aa22.27■■□□□ 1.16
PTPA-207ENST00000393370 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
PTPA-207ENST00000393370 ANKRD30BQ9BXX2 1392 aa22.27■■□□□ 1.16
PTPA-207ENST00000393370 GCC2Q8IWJ2 1684 aa22.25■■□□□ 1.15
PTPA-207ENST00000393370 USP47Q96K76 1375 aa22.25■■□□□ 1.15
PTPA-207ENST00000393370 XRCC6P12956 609 aaKnown RBP eCLIP22.24■■□□□ 1.15
PTPA-207ENST00000393370 MYBBP1AQ9BQG0 1328 aaKnown RBP22.24■■□□□ 1.15
PTPA-207ENST00000393370 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
PTPA-207ENST00000393370 CENPQQ7L2Z9 268 aaPredicted RBP22.23■■□□□ 1.15
PTPA-207ENST00000393370 KIF15Q9NS87 1388 aa22.22■■□□□ 1.15
PTPA-207ENST00000393370 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
PTPA-207ENST00000393370 RGS3P49796 1198 aa22.21■■□□□ 1.15
PTPA-207ENST00000393370 PANK2Q9BZ23 570 aa22.21■■□□□ 1.15
PTPA-207ENST00000393370 SNAPC4Q5SXM2 1469 aa22.2■■□□□ 1.15
PTPA-207ENST00000393370 SLKQ9H2G2 1235 aaPredicted RBP22.19■■□□□ 1.14
PTPA-207ENST00000393370 EFCAB5A4FU69 1503 aa22.19■■□□□ 1.14
PTPA-207ENST00000393370 ARID4BQ4LE39 1312 aaPredicted RBP22.18■■□□□ 1.14
PTPA-207ENST00000393370 ZNF326Q5BKZ1 582 aaKnown RBP22.17■■□□□ 1.14
PTPA-207ENST00000393370 RALBP1Q15311 655 aa22.16■■□□□ 1.14
PTPA-207ENST00000393370 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
PTPA-207ENST00000393370 ROCK2O75116 1388 aaKnown RBP22.15■■□□□ 1.14
PTPA-207ENST00000393370 GOLGA6L3A6NEY3 463 aa22.15■■□□□ 1.14
PTPA-207ENST00000393370 USP19O94966 1318 aa22.14■■□□□ 1.14
PTPA-207ENST00000393370 FSD2A1L4K1 749 aa22.14■■□□□ 1.13
PTPA-207ENST00000393370 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
PTPA-207ENST00000393370 SUPT6HQ7KZ85 1726 aaKnown RBP22.12■■□□□ 1.13
PTPA-207ENST00000393370 LRRIQ1Q96JM4 1722 aa22.11■■□□□ 1.13
PTPA-207ENST00000393370 UGGT2Q9NYU1 1516 aa22.09■■□□□ 1.13
PTPA-207ENST00000393370 NLRP13Q86W25 1043 aa22.09■■□□□ 1.13
PTPA-207ENST00000393370 SLC4A1APQ9BWU0 796 aaKnown RBP22.09■■□□□ 1.13
PTPA-207ENST00000393370 GZF1Q9H116 711 aaPredicted RBP22.09■■□□□ 1.13
PTPA-207ENST00000393370 ANTXR1Q9H6X2 564 aa22.09■■□□□ 1.13
PTPA-207ENST00000393370 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
PTPA-207ENST00000393370 KDM5CP41229 1560 aa22.09■■□□□ 1.13
PTPA-207ENST00000393370 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.13
PTPA-207ENST00000393370 SEC24BO95487 1268 aa22.06■■□□□ 1.12
PTPA-207ENST00000393370 BECN1Q14457 450 aa22.06■■□□□ 1.12
PTPA-207ENST00000393370 MBD5Q9P267 1494 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms