RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
SGCB-201ENST00000381431 A0A0G2JS52 829 aa22.13■■□□□ 1.13
SGCB-201ENST00000381431 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
SGCB-201ENST00000381431 STK26Q9P289 416 aa22.12■■□□□ 1.13
SGCB-201ENST00000381431 TPRNQ4KMQ1 711 aa22.12■■□□□ 1.13
SGCB-201ENST00000381431 TRIM44Q96DX7 344 aaPredicted RBP22.12■■□□□ 1.13
SGCB-201ENST00000381431 GOLGA6L22H0YM25 854 aa22.12■■□□□ 1.13
SGCB-201ENST00000381431 SOX12O15370 315 aa22.12■■□□□ 1.13
SGCB-201ENST00000381431 ERICH6BQ5W0A0 696 aa22.11■■□□□ 1.13
SGCB-201ENST00000381431 RALBP1Q15311 655 aa22.11■■□□□ 1.13
SGCB-201ENST00000381431 MLECQ14165 292 aa22.1■■□□□ 1.13
SGCB-201ENST00000381431 DEKP35659 375 aaKnown RBP22.09■■□□□ 1.13
SGCB-201ENST00000381431 CARMIL2Q6F5E8 1435 aa22.09■■□□□ 1.13
SGCB-201ENST00000381431 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
SGCB-201ENST00000381431 KANK1Q14678 1352 aa22.08■■□□□ 1.13
SGCB-201ENST00000381431 EFCAB2Q5VUJ9 269 aa22.06■■□□□ 1.12
SGCB-201ENST00000381431 PRKRIP1Q9H875 184 aaPredicted RBP22.06■■□□□ 1.12
SGCB-201ENST00000381431 SPRYD3Q8NCJ5 442 aa22.05■■□□□ 1.12
SGCB-201ENST00000381431 LMOD2Q6P5Q4 547 aa22.05■■□□□ 1.12
SGCB-201ENST00000381431 NLRP13Q86W25 1043 aa22.05■■□□□ 1.12
SGCB-201ENST00000381431 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
SGCB-201ENST00000381431 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
SGCB-201ENST00000381431 JPH4Q96JJ6 628 aa22.04■■□□□ 1.12
SGCB-201ENST00000381431 IGF1RP08069 1367 aa22.03■■□□□ 1.12
SGCB-201ENST00000381431 KIF3BO15066 747 aa22.02■■□□□ 1.12
SGCB-201ENST00000381431 MS4A1P11836 297 aa22.01■■□□□ 1.11
SGCB-201ENST00000381431 CCDC146Q8IYE0 955 aa22■■□□□ 1.11
SGCB-201ENST00000381431 GLIPR1L2Q4G1C9 344 aa21.98■■□□□ 1.11
SGCB-201ENST00000381431 CASC1Q6TDU7 716 aa21.98■■□□□ 1.11
SGCB-201ENST00000381431 HSP90AB1P08238 724 aaKnown RBP21.97■■□□□ 1.11
SGCB-201ENST00000381431 TCERG1O14776 1098 aaKnown RBP21.97■■□□□ 1.11
SGCB-201ENST00000381431 CLUAP1Q96AJ1 413 aa21.96■■□□□ 1.11
SGCB-201ENST00000381431 NUTM2DQ5VT03 806 aaPredicted RBP21.94■■□□□ 1.1
SGCB-201ENST00000381431 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
SGCB-201ENST00000381431 CCDC18Q5T9S5 1454 aa21.94■■□□□ 1.1
SGCB-201ENST00000381431 SLKQ9H2G2 1235 aaPredicted RBP21.93■■□□□ 1.1
SGCB-201ENST00000381431 PHLDB1Q86UU1 1377 aa21.93■■□□□ 1.1
SGCB-201ENST00000381431 APBB1O00213 710 aa21.92■■□□□ 1.1
SGCB-201ENST00000381431 PNNQ9H307 717 aaKnown RBP21.92■■□□□ 1.1
SGCB-201ENST00000381431 PANK3Q9H999 370 aa21.92■■□□□ 1.1
SGCB-201ENST00000381431 ZNF644Q9H582 1327 aaPredicted RBP21.91■■□□□ 1.1
SGCB-201ENST00000381431 PLIN1O60240 522 aa21.91■■□□□ 1.1
SGCB-201ENST00000381431 CHMP4BQ9H444 224 aaKnown RBP21.91■■□□□ 1.1
SGCB-201ENST00000381431 PTMAP06454 111 aaKnown RBP21.91■■□□□ 1.1
SGCB-201ENST00000381431 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
SGCB-201ENST00000381431 HSCBQ8IWL3 235 aa21.88■■□□□ 1.09
SGCB-201ENST00000381431 SPAG9O60271 1321 aaKnown RBP21.88■■□□□ 1.09
SGCB-201ENST00000381431 IPO9Q96P70 1041 aaKnown RBP21.88■■□□□ 1.09
SGCB-201ENST00000381431 KIF21BO75037 1637 aa21.87■■□□□ 1.09
SGCB-201ENST00000381431 PDE3BQ13370 1112 aa21.86■■□□□ 1.09
SGCB-201ENST00000381431 ITPRIPQ8IWB1 547 aa21.86■■□□□ 1.09
SGCB-201ENST00000381431 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
SGCB-201ENST00000381431 USP47Q96K76 1375 aa21.85■■□□□ 1.09
SGCB-201ENST00000381431 RSPH4AQ5TD94 716 aa21.85■■□□□ 1.09
SGCB-201ENST00000381431 MYBBP1AQ9BQG0 1328 aaKnown RBP21.85■■□□□ 1.09
SGCB-201ENST00000381431 PLCB2Q00722 1185 aa21.85■■□□□ 1.09
SGCB-201ENST00000381431 HAP1P54257 671 aaPredicted RBP21.85■■□□□ 1.09
SGCB-201ENST00000381431 OS9Q13438 667 aaPredicted RBP21.85■■□□□ 1.09
SGCB-201ENST00000381431 HDGFL2Q7Z4V5 671 aaPredicted RBP21.85■■□□□ 1.09
SGCB-201ENST00000381431 EXOC6Q8TAG9 804 aa21.85■■□□□ 1.09
SGCB-201ENST00000381431 RRP7AQ9Y3A4 280 aaKnown RBP21.85■■□□□ 1.09
SGCB-201ENST00000381431 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
SGCB-201ENST00000381431 ZBED9Q6R2W3 1325 aa21.84■■□□□ 1.09
SGCB-201ENST00000381431 NAP1L5Q96NT1 182 aaPredicted RBP21.83■■□□□ 1.09
SGCB-201ENST00000381431 KIF15Q9NS87 1388 aa21.83■■□□□ 1.08
SGCB-201ENST00000381431 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.08
SGCB-201ENST00000381431 IPO8O15397 1037 aaKnown RBP21.82■■□□□ 1.08
SGCB-201ENST00000381431 RWDD1Q9H446 243 aaPredicted RBP21.82■■□□□ 1.08
SGCB-201ENST00000381431 TAOK2Q9UL54 1235 aa21.81■■□□□ 1.08
SGCB-201ENST00000381431 DNTTIP2Q5QJE6 756 aaKnown RBP21.81■■□□□ 1.08
SGCB-201ENST00000381431 GZF1Q9H116 711 aaPredicted RBP21.8■■□□□ 1.08
SGCB-201ENST00000381431 SMC4Q9NTJ3 1288 aa21.8■■□□□ 1.08
SGCB-201ENST00000381431 BCL2L13Q9BXK5 485 aa21.8■■□□□ 1.08
SGCB-201ENST00000381431 CCDC144AA2RUR9 1427 aa21.79■■□□□ 1.08
SGCB-201ENST00000381431 FGD6Q6ZV73 1430 aa21.79■■□□□ 1.08
SGCB-201ENST00000381431 KCNJ4P48050 445 aa21.78■■□□□ 1.08
SGCB-201ENST00000381431 ARAP1Q96P48 1450 aa21.78■■□□□ 1.08
SGCB-201ENST00000381431 CENPJQ9HC77 1338 aaPredicted RBP21.77■■□□□ 1.08
SGCB-201ENST00000381431 KIF7Q2M1P5 1343 aa21.77■■□□□ 1.07
SGCB-201ENST00000381431 WASHC2CQ9Y4E1 1318 aa21.75■■□□□ 1.07
SGCB-201ENST00000381431 SLC4A3P48751 1232 aa21.75■■□□□ 1.07
SGCB-201ENST00000381431 MFAP1P55081 439 aaKnown RBP21.75■■□□□ 1.07
SGCB-201ENST00000381431 RTF1Q92541 710 aaKnown RBP21.75■■□□□ 1.07
SGCB-201ENST00000381431 RRP1P56182 461 aaKnown RBP21.74■■□□□ 1.07
SGCB-201ENST00000381431 WASHC2AQ641Q2 1341 aa21.74■■□□□ 1.07
SGCB-201ENST00000381431 PDE4AP27815 886 aa21.74■■□□□ 1.07
SGCB-201ENST00000381431 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
SGCB-201ENST00000381431 LRRC9Q6ZRR7 1453 aa21.73■■□□□ 1.07
SGCB-201ENST00000381431 APAF1O14727 1248 aa21.73■■□□□ 1.07
SGCB-201ENST00000381431 FGD1P98174 961 aa21.73■■□□□ 1.07
SGCB-201ENST00000381431 EIF3AQ14152 1382 aaKnown RBP21.72■■□□□ 1.07
SGCB-201ENST00000381431 CRBNQ96SW2 442 aa21.72■■□□□ 1.07
SGCB-201ENST00000381431 CCDC7Q96M83 1385 aa21.71■■□□□ 1.07
SGCB-201ENST00000381431 NUTM2FA1L443 756 aa21.71■■□□□ 1.07
SGCB-201ENST00000381431 ZRSR1Q15695 479 aaKnown RBP21.7■■□□□ 1.06
SGCB-201ENST00000381431 MYOM3Q5VTT5 1437 aa21.7■■□□□ 1.06
SGCB-201ENST00000381431 PMFBP1Q8TBY8 1022 aa21.7■■□□□ 1.06
SGCB-201ENST00000381431 UACAQ9BZF9 1416 aa21.7■■□□□ 1.06
SGCB-201ENST00000381431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.69■■□□□ 1.06
SGCB-201ENST00000381431 TERF2IPQ9NYB0 399 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms