RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 EFCAB5A4FU69 1503 aa14.96□□□□□ -0.02
DNMT3A-203ENST00000380746 SNAPC4Q5SXM2 1469 aa14.93□□□□□ -0.02
DNMT3A-203ENST00000380746 EPRSP07814 1512 aaKnown RBP14.93□□□□□ -0.02
DNMT3A-203ENST00000380746 GRIN2BQ13224 1484 aa14.93□□□□□ -0.02
DNMT3A-203ENST00000380746 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
DNMT3A-203ENST00000380746 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
DNMT3A-203ENST00000380746 PLB1Q6P1J6 1458 aa14.91□□□□□ -0.02
DNMT3A-203ENST00000380746 MAP3K1Q13233 1512 aa14.91□□□□□ -0.02
DNMT3A-203ENST00000380746 CC2D1BQ5T0F9 858 aaKnown RBP14.9□□□□□ -0.02
DNMT3A-203ENST00000380746 PRKRIP1Q9H875 184 aaPredicted RBP14.9□□□□□ -0.02
DNMT3A-203ENST00000380746 ST20-MTHFSA0A0A6YYL1 179 aa14.89□□□□□ -0.03
DNMT3A-203ENST00000380746 MRC2Q9UBG0 1479 aa14.88□□□□□ -0.03
DNMT3A-203ENST00000380746 KIF7Q2M1P5 1343 aa14.88□□□□□ -0.03
DNMT3A-203ENST00000380746 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
DNMT3A-203ENST00000380746 CUL7Q14999 1698 aa14.87□□□□□ -0.03
DNMT3A-203ENST00000380746 KIF21AQ7Z4S6 1674 aa14.87□□□□□ -0.03
DNMT3A-203ENST00000380746 MAGI3Q5TCQ9 1506 aa14.86□□□□□ -0.03
DNMT3A-203ENST00000380746 RBM19Q9Y4C8 960 aaKnown RBP14.85□□□□□ -0.03
DNMT3A-203ENST00000380746 PTPN23Q9H3S7 1636 aa14.85□□□□□ -0.03
DNMT3A-203ENST00000380746 CARMIL2Q6F5E8 1435 aa14.85□□□□□ -0.03
DNMT3A-203ENST00000380746 IQGAP2Q13576 1575 aa14.84□□□□□ -0.03
DNMT3A-203ENST00000380746 EHBP1L1Q8N3D4 1523 aa14.84□□□□□ -0.03
DNMT3A-203ENST00000380746 SUPT6HQ7KZ85 1726 aaKnown RBP14.83□□□□□ -0.04
DNMT3A-203ENST00000380746 ANKRD30AQ9BXX3 1397 aa14.83□□□□□ -0.04
DNMT3A-203ENST00000380746 CCDC7Q96M83 1385 aa14.82□□□□□ -0.04
DNMT3A-203ENST00000380746 ABCC5O15440 1437 aa14.81□□□□□ -0.04
DNMT3A-203ENST00000380746 DAPK1P53355 1430 aa14.81□□□□□ -0.04
DNMT3A-203ENST00000380746 NPM2Q86SE8 214 aaKnown RBP14.81□□□□□ -0.04
DNMT3A-203ENST00000380746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.81□□□□□ -0.04
DNMT3A-203ENST00000380746 CTTNBP2Q8WZ74 1663 aa14.8□□□□□ -0.04
DNMT3A-203ENST00000380746 CFAP43Q8NDM7 1665 aa14.8□□□□□ -0.04
DNMT3A-203ENST00000380746 CCDC136Q96JN2 1154 aa14.8□□□□□ -0.04
DNMT3A-203ENST00000380746 USP47Q96K76 1375 aa14.79□□□□□ -0.04
DNMT3A-203ENST00000380746 PTPRGP23470 1445 aa14.79□□□□□ -0.04
DNMT3A-203ENST00000380746 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
DNMT3A-203ENST00000380746 IFT140Q96RY7 1462 aa14.77□□□□□ -0.05
DNMT3A-203ENST00000380746 ANKRD50Q9ULJ7 1429 aa14.76□□□□□ -0.05
DNMT3A-203ENST00000380746 KDM6BO15054 1643 aa14.76□□□□□ -0.05
DNMT3A-203ENST00000380746 KIAA0586Q9BVV6 1533 aa14.76□□□□□ -0.05
DNMT3A-203ENST00000380746 ROCK2O75116 1388 aaKnown RBP14.76□□□□□ -0.05
DNMT3A-203ENST00000380746 ANKRD30BQ9BXX2 1392 aa14.76□□□□□ -0.05
DNMT3A-203ENST00000380746 UGGT2Q9NYU1 1516 aa14.75□□□□□ -0.05
DNMT3A-203ENST00000380746 HECW1Q76N89 1606 aa14.75□□□□□ -0.05
DNMT3A-203ENST00000380746 GRIN2AQ12879 1464 aa14.75□□□□□ -0.05
DNMT3A-203ENST00000380746 TNNT2P45379 298 aaPredicted RBP14.74□□□□□ -0.05
DNMT3A-203ENST00000380746 NUP153P49790 1475 aaKnown RBP14.74□□□□□ -0.05
DNMT3A-203ENST00000380746 ARHGEF11O15085 1522 aa14.74□□□□□ -0.05
DNMT3A-203ENST00000380746 ABCA5Q8WWZ7 1642 aa14.74□□□□□ -0.05
DNMT3A-203ENST00000380746 KIF15Q9NS87 1388 aa14.74□□□□□ -0.05
DNMT3A-203ENST00000380746 TROQ12816 1431 aaPredicted RBP14.73□□□□□ -0.05
DNMT3A-203ENST00000380746 MIA2Q96PC5 1412 aa14.73□□□□□ -0.05
DNMT3A-203ENST00000380746 EIF5BO60841 1220 aaKnown RBP14.73□□□□□ -0.05
DNMT3A-203ENST00000380746 AFAP1Q8N556 730 aa14.73□□□□□ -0.05
DNMT3A-203ENST00000380746 NUTM2DQ5VT03 806 aaPredicted RBP14.72□□□□□ -0.05
DNMT3A-203ENST00000380746 CNTLNQ9NXG0 1405 aa14.71□□□□□ -0.05
DNMT3A-203ENST00000380746 PPP4R2Q9NY27 417 aa14.7□□□□□ -0.06
DNMT3A-203ENST00000380746 NBR1Q14596 966 aa14.7□□□□□ -0.06
DNMT3A-203ENST00000380746 NCOA1Q15788 1441 aa14.68□□□□□ -0.06
DNMT3A-203ENST00000380746 CAMSAP2Q08AD1 1489 aa14.68□□□□□ -0.06
DNMT3A-203ENST00000380746 TARBP1Q13395 1621 aaKnown RBP14.68□□□□□ -0.06
DNMT3A-203ENST00000380746 SAMD9Q5K651 1589 aa14.68□□□□□ -0.06
DNMT3A-203ENST00000380746 DISP1Q96F81 1524 aa14.67□□□□□ -0.06
DNMT3A-203ENST00000380746 ANP32EQ9BTT0 268 aa14.67□□□□□ -0.06
DNMT3A-203ENST00000380746 KIF3BO15066 747 aa14.67□□□□□ -0.06
DNMT3A-203ENST00000380746 PLIN1O60240 522 aa14.67□□□□□ -0.06
DNMT3A-203ENST00000380746 SAFB2Q14151 953 aaKnown RBP eCLIP14.66□□□□□ -0.06
DNMT3A-203ENST00000380746 NEUROD2Q15784 382 aa14.66□□□□□ -0.06
DNMT3A-203ENST00000380746 GGT6Q6P531 493 aa14.66□□□□□ -0.06
DNMT3A-203ENST00000380746 C9orf84Q5VXU9 1444 aa14.66□□□□□ -0.06
DNMT3A-203ENST00000380746 PANK3Q9H999 370 aa14.65□□□□□ -0.06
DNMT3A-203ENST00000380746 ADAMTS12P58397 1594 aa14.65□□□□□ -0.06
DNMT3A-203ENST00000380746 PLPPR3Q6T4P5 718 aa14.65□□□□□ -0.06
DNMT3A-203ENST00000380746 GPATCH8Q9UKJ3 1502 aaKnown RBP14.65□□□□□ -0.06
DNMT3A-203ENST00000380746 WDR62O43379 1518 aa14.64□□□□□ -0.07
DNMT3A-203ENST00000380746 AKNAQ7Z591 1439 aa14.64□□□□□ -0.07
DNMT3A-203ENST00000380746 EFCAB2Q5VUJ9 269 aa14.63□□□□□ -0.07
DNMT3A-203ENST00000380746 KIAA1107Q9UPP5 1409 aa14.63□□□□□ -0.07
DNMT3A-203ENST00000380746 CDCA7LQ96GN5 454 aa14.62□□□□□ -0.07
DNMT3A-203ENST00000380746 NPM1P06748 294 aaKnown RBP eCLIP14.62□□□□□ -0.07
DNMT3A-203ENST00000380746 KNSTRNQ9Y448 316 aa14.62□□□□□ -0.07
DNMT3A-203ENST00000380746 CCDC144AA2RUR9 1427 aa14.62□□□□□ -0.07
DNMT3A-203ENST00000380746 WDR43Q15061 677 aaKnown RBP eCLIP14.62□□□□□ -0.07
DNMT3A-203ENST00000380746 LRRIQ1Q96JM4 1722 aa14.61□□□□□ -0.07
DNMT3A-203ENST00000380746 SYNJ2O15056 1496 aa14.61□□□□□ -0.07
DNMT3A-203ENST00000380746 RPRD2Q5VT52 1461 aaKnown RBP14.61□□□□□ -0.07
DNMT3A-203ENST00000380746 DAXXQ9UER7 740 aaPredicted RBP14.61□□□□□ -0.07
DNMT3A-203ENST00000380746 ZBED9Q6R2W3 1325 aa14.61□□□□□ -0.07
DNMT3A-203ENST00000380746 CCDC146Q8IYE0 955 aa14.6□□□□□ -0.07
DNMT3A-203ENST00000380746 DENND4BO75064 1496 aaPredicted RBP14.6□□□□□ -0.07
DNMT3A-203ENST00000380746 SPAG9O60271 1321 aaKnown RBP14.6□□□□□ -0.07
DNMT3A-203ENST00000380746 PBRM1Q86U86 1689 aa14.6□□□□□ -0.07
DNMT3A-203ENST00000380746 NUDCQ9Y266 331 aa14.59□□□□□ -0.07
DNMT3A-203ENST00000380746 ROCK1Q13464 1354 aa14.59□□□□□ -0.07
DNMT3A-203ENST00000380746 TMF1P82094 1093 aa14.59□□□□□ -0.07
DNMT3A-203ENST00000380746 ATP10BO94823 1461 aa14.59□□□□□ -0.07
DNMT3A-203ENST00000380746 SKAP1Q86WV1 359 aa14.58□□□□□ -0.08
DNMT3A-203ENST00000380746 KIAA0556O60303 1618 aa14.58□□□□□ -0.08
DNMT3A-203ENST00000380746 MAGI1Q96QZ7 1491 aaPredicted RBP14.58□□□□□ -0.08
DNMT3A-203ENST00000380746 EIF4G3O43432 1585 aaKnown RBP14.57□□□□□ -0.08
DNMT3A-203ENST00000380746 TCOF1Q13428 1488 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms