RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
DNMT3A-203ENST00000380746 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
DNMT3A-203ENST00000380746 SHROOM4Q9ULL8 1493 aa19.64■□□□□ 0.73
DNMT3A-203ENST00000380746 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
DNMT3A-203ENST00000380746 EHMT2Q96KQ7 1210 aa18.39■□□□□ 0.53
DNMT3A-203ENST00000380746 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
DNMT3A-203ENST00000380746 FAM9AQ8IZU1 332 aaPredicted RBP18.11■□□□□ 0.49
DNMT3A-203ENST00000380746 PCGF6Q9BYE7 350 aa18.07■□□□□ 0.48
DNMT3A-203ENST00000380746 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
DNMT3A-203ENST00000380746 LOC105371045A0A1W2PR82 267 aa18.05■□□□□ 0.48
DNMT3A-203ENST00000380746 ABCC9O60706 1549 aa17.78■□□□□ 0.44
DNMT3A-203ENST00000380746 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
DNMT3A-203ENST00000380746 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
DNMT3A-203ENST00000380746 TRIM41Q8WV44 630 aa17.74■□□□□ 0.43
DNMT3A-203ENST00000380746 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-203ENST00000380746 TTBK1Q5TCY1 1321 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-203ENST00000380746 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
DNMT3A-203ENST00000380746 HRCP23327 699 aa17.5■□□□□ 0.39
DNMT3A-203ENST00000380746 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
DNMT3A-203ENST00000380746 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
DNMT3A-203ENST00000380746 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.35
DNMT3A-203ENST00000380746 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
DNMT3A-203ENST00000380746 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
DNMT3A-203ENST00000380746 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
DNMT3A-203ENST00000380746 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
DNMT3A-203ENST00000380746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-203ENST00000380746 RB1CC1Q8TDY2 1594 aa17.03■□□□□ 0.32
DNMT3A-203ENST00000380746 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.31
DNMT3A-203ENST00000380746 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
DNMT3A-203ENST00000380746 PELP1Q8IZL8 1130 aaKnown RBP16.82■□□□□ 0.28
DNMT3A-203ENST00000380746 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
DNMT3A-203ENST00000380746 WIZO95785 1651 aa16.8■□□□□ 0.28
DNMT3A-203ENST00000380746 NACADO15069 1562 aa16.79■□□□□ 0.28
DNMT3A-203ENST00000380746 APLP2Q06481 763 aa16.77■□□□□ 0.28
DNMT3A-203ENST00000380746 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.27
DNMT3A-203ENST00000380746 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
DNMT3A-203ENST00000380746 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
DNMT3A-203ENST00000380746 ATP1B4Q9UN42 357 aaPredicted RBP16.64■□□□□ 0.26
DNMT3A-203ENST00000380746 SOGA1O94964 1423 aa16.63■□□□□ 0.25
DNMT3A-203ENST00000380746 ITGAEP38570 1179 aa16.62■□□□□ 0.25
DNMT3A-203ENST00000380746 YTHDC1Q96MU7 727 aaKnown RBP16.61■□□□□ 0.25
DNMT3A-203ENST00000380746 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
DNMT3A-203ENST00000380746 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
DNMT3A-203ENST00000380746 MYT1Q01538 1121 aa16.53■□□□□ 0.24
DNMT3A-203ENST00000380746 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
DNMT3A-203ENST00000380746 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
DNMT3A-203ENST00000380746 DIEXFQ68CQ4 756 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-203ENST00000380746 P3H3Q8IVL6 736 aa16.39■□□□□ 0.22
DNMT3A-203ENST00000380746 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
DNMT3A-203ENST00000380746 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
DNMT3A-203ENST00000380746 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
DNMT3A-203ENST00000380746 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
DNMT3A-203ENST00000380746 SMARCA2P51531 1590 aa16.27■□□□□ 0.19
DNMT3A-203ENST00000380746 TNIKQ9UKE5 1360 aa16.25■□□□□ 0.19
DNMT3A-203ENST00000380746 CLIP1P30622 1438 aa16.25■□□□□ 0.19
DNMT3A-203ENST00000380746 SCAF1Q9H7N4 1312 aaKnown RBP16.23■□□□□ 0.19
DNMT3A-203ENST00000380746 CENPBP07199 599 aaPredicted RBP16.21■□□□□ 0.18
DNMT3A-203ENST00000380746 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
DNMT3A-203ENST00000380746 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
DNMT3A-203ENST00000380746 FAM50AQ14320 339 aaKnown RBP16.18■□□□□ 0.18
DNMT3A-203ENST00000380746 ARID3CA6NKF2 412 aa16.16■□□□□ 0.18
DNMT3A-203ENST00000380746 ATAD2BQ9ULI0 1458 aa16.16■□□□□ 0.18
DNMT3A-203ENST00000380746 ZNF316A6NFI3 1004 aaPredicted RBP16.16■□□□□ 0.18
DNMT3A-203ENST00000380746 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
DNMT3A-203ENST00000380746 KANK4Q5T7N3 995 aaPredicted RBP16.12■□□□□ 0.17
DNMT3A-203ENST00000380746 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
DNMT3A-203ENST00000380746 EEA1Q15075 1411 aa16.07■□□□□ 0.16
DNMT3A-203ENST00000380746 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
DNMT3A-203ENST00000380746 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
DNMT3A-203ENST00000380746 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
DNMT3A-203ENST00000380746 MIER1Q8N108 512 aa16.06■□□□□ 0.16
DNMT3A-203ENST00000380746 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
DNMT3A-203ENST00000380746 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
DNMT3A-203ENST00000380746 HIRIP3Q9BW71 556 aaPredicted RBP16■□□□□ 0.15
DNMT3A-203ENST00000380746 CNGB1Q14028 1251 aaPredicted RBP15.94■□□□□ 0.14
DNMT3A-203ENST00000380746 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
DNMT3A-203ENST00000380746 EIF4G1Q04637 1599 aaKnown RBP15.91■□□□□ 0.14
DNMT3A-203ENST00000380746 KIF27Q86VH2 1401 aa15.9■□□□□ 0.14
DNMT3A-203ENST00000380746 PRKCSHP14314 528 aaPredicted RBP15.89■□□□□ 0.13
DNMT3A-203ENST00000380746 CUX2O14529 1486 aa15.89■□□□□ 0.13
DNMT3A-203ENST00000380746 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
DNMT3A-203ENST00000380746 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
DNMT3A-203ENST00000380746 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
DNMT3A-203ENST00000380746 FBLN2P98095 1184 aa15.82■□□□□ 0.12
DNMT3A-203ENST00000380746 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
DNMT3A-203ENST00000380746 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
DNMT3A-203ENST00000380746 BCANQ96GW7 911 aa15.78■□□□□ 0.12
DNMT3A-203ENST00000380746 TRIM52Q96A61 297 aa15.77■□□□□ 0.12
DNMT3A-203ENST00000380746 KIF21BO75037 1637 aa15.76■□□□□ 0.11
DNMT3A-203ENST00000380746 TDRD9Q8NDG6 1382 aaKnown RBP15.74■□□□□ 0.11
DNMT3A-203ENST00000380746 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
DNMT3A-203ENST00000380746 ARAP1Q96P48 1450 aa15.72■□□□□ 0.11
DNMT3A-203ENST00000380746 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
DNMT3A-203ENST00000380746 CCNB3Q8WWL7 1395 aa15.71■□□□□ 0.11
DNMT3A-203ENST00000380746 CUX1P39880 1505 aa15.71■□□□□ 0.1
DNMT3A-203ENST00000380746 IGF1RP08069 1367 aa15.7■□□□□ 0.1
DNMT3A-203ENST00000380746 RRP7BPQ9NSQ0 103 aa15.69■□□□□ 0.1
DNMT3A-203ENST00000380746 NCAPD3P42695 1498 aa15.69■□□□□ 0.1
DNMT3A-203ENST00000380746 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
DNMT3A-203ENST00000380746 KCNH8Q96L42 1107 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms