RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RTL5Q5HYW3 569 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-202ENST00000380281 PPP4R2Q9NY27 417 aa16.89■□□□□ 0.3
PRPF40B-202ENST00000380281 EFCAB5A4FU69 1503 aa16.89■□□□□ 0.29
PRPF40B-202ENST00000380281 UBE2Q2Q8WVN8 375 aa16.89■□□□□ 0.29
PRPF40B-202ENST00000380281 CCDC7Q96M83 1385 aa16.88■□□□□ 0.29
PRPF40B-202ENST00000380281 CFDP1Q9UEE9 299 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-202ENST00000380281 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
PRPF40B-202ENST00000380281 KDM6BO15054 1643 aa16.87■□□□□ 0.29
PRPF40B-202ENST00000380281 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.87■□□□□ 0.29
PRPF40B-202ENST00000380281 PKD2Q13563 968 aa16.87■□□□□ 0.29
PRPF40B-202ENST00000380281 TMC1Q8TDI8 760 aa16.84■□□□□ 0.29
PRPF40B-202ENST00000380281 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
PRPF40B-202ENST00000380281 NPM2Q86SE8 214 aaKnown RBP16.83■□□□□ 0.29
PRPF40B-202ENST00000380281 GRIN2BQ13224 1484 aa16.83■□□□□ 0.29
PRPF40B-202ENST00000380281 CNTLNQ9NXG0 1405 aa16.83■□□□□ 0.28
PRPF40B-202ENST00000380281 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
PRPF40B-202ENST00000380281 DENND4BO75064 1496 aaPredicted RBP16.81■□□□□ 0.28
PRPF40B-202ENST00000380281 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
PRPF40B-202ENST00000380281 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
PRPF40B-202ENST00000380281 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.28
PRPF40B-202ENST00000380281 CARD11Q9BXL7 1154 aa16.79■□□□□ 0.28
PRPF40B-202ENST00000380281 SUPT6HQ7KZ85 1726 aaKnown RBP16.79■□□□□ 0.28
PRPF40B-202ENST00000380281 CTTNBP2Q8WZ74 1663 aa16.79■□□□□ 0.28
PRPF40B-202ENST00000380281 LRRIQ1Q96JM4 1722 aa16.78■□□□□ 0.28
PRPF40B-202ENST00000380281 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
PRPF40B-202ENST00000380281 KDM5BQ9UGL1 1544 aa16.78■□□□□ 0.28
PRPF40B-202ENST00000380281 DCAF11Q8TEB1 546 aa16.77■□□□□ 0.28
PRPF40B-202ENST00000380281 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
PRPF40B-202ENST00000380281 EHBP1L1Q8N3D4 1523 aa16.76■□□□□ 0.27
PRPF40B-202ENST00000380281 ZBED9Q6R2W3 1325 aa16.76■□□□□ 0.27
PRPF40B-202ENST00000380281 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
PRPF40B-202ENST00000380281 CUL7Q14999 1698 aa16.75■□□□□ 0.27
PRPF40B-202ENST00000380281 ZBTB47Q9UFB7 747 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-202ENST00000380281 ANKRD30BQ9BXX2 1392 aa16.75■□□□□ 0.27
PRPF40B-202ENST00000380281 UGGT2Q9NYU1 1516 aa16.74■□□□□ 0.27
PRPF40B-202ENST00000380281 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
PRPF40B-202ENST00000380281 PRG4Q92954 1404 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-202ENST00000380281 ANP32AP39687 249 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-202ENST00000380281 HNRNPMP52272 730 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRPF40B-202ENST00000380281 IPO9Q96P70 1041 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-202ENST00000380281 USP47Q96K76 1375 aa16.72■□□□□ 0.27
PRPF40B-202ENST00000380281 NCOA1Q15788 1441 aa16.71■□□□□ 0.27
PRPF40B-202ENST00000380281 SKAP1Q86WV1 359 aa16.71■□□□□ 0.26
PRPF40B-202ENST00000380281 ABCC5O15440 1437 aa16.7■□□□□ 0.26
PRPF40B-202ENST00000380281 DAPK1P53355 1430 aa16.7■□□□□ 0.26
PRPF40B-202ENST00000380281 CC2D1BQ5T0F9 858 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-202ENST00000380281 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-202ENST00000380281 NUP155O75694 1391 aa16.69■□□□□ 0.26
PRPF40B-202ENST00000380281 ZNF608Q9ULD9 1512 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-202ENST00000380281 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
PRPF40B-202ENST00000380281 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
PRPF40B-202ENST00000380281 SAMD9Q5K651 1589 aa16.66■□□□□ 0.26
PRPF40B-202ENST00000380281 PLIN1O60240 522 aa16.66■□□□□ 0.26
PRPF40B-202ENST00000380281 TSPY4P0CV99 314 aa16.66■□□□□ 0.26
PRPF40B-202ENST00000380281 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
PRPF40B-202ENST00000380281 BRPF3Q9ULD4 1205 aa16.65■□□□□ 0.26
PRPF40B-202ENST00000380281 NEFMP07197 916 aa16.65■□□□□ 0.26
PRPF40B-202ENST00000380281 PLEKHD1A6NEE1 506 aa16.64■□□□□ 0.25
PRPF40B-202ENST00000380281 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
PRPF40B-202ENST00000380281 RPRD2Q5VT52 1461 aaKnown RBP16.63■□□□□ 0.25
PRPF40B-202ENST00000380281 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
PRPF40B-202ENST00000380281 PNISRQ8TF01 805 aaKnown RBP16.62■□□□□ 0.25
PRPF40B-202ENST00000380281 IQGAP2Q13576 1575 aa16.62■□□□□ 0.25
PRPF40B-202ENST00000380281 ABCA5Q8WWZ7 1642 aa16.61■□□□□ 0.25
PRPF40B-202ENST00000380281 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
PRPF40B-202ENST00000380281 PLB1Q6P1J6 1458 aa16.61■□□□□ 0.25
PRPF40B-202ENST00000380281 MIA2Q96PC5 1412 aa16.61■□□□□ 0.25
PRPF40B-202ENST00000380281 HECW1Q76N89 1606 aa16.6■□□□□ 0.25
PRPF40B-202ENST00000380281 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
PRPF40B-202ENST00000380281 KIF21AQ7Z4S6 1674 aa16.59■□□□□ 0.25
PRPF40B-202ENST00000380281 TCOF1Q13428 1488 aaKnown RBP16.58■□□□□ 0.25
PRPF40B-202ENST00000380281 TEX14Q8IWB6 1497 aa16.57■□□□□ 0.24
PRPF40B-202ENST00000380281 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
PRPF40B-202ENST00000380281 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-202ENST00000380281 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
PRPF40B-202ENST00000380281 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
PRPF40B-202ENST00000380281 ANKRD50Q9ULJ7 1429 aa16.54■□□□□ 0.24
PRPF40B-202ENST00000380281 ROCK2O75116 1388 aaKnown RBP16.54■□□□□ 0.24
PRPF40B-202ENST00000380281 ANKRD30AQ9BXX3 1397 aa16.54■□□□□ 0.24
PRPF40B-202ENST00000380281 PKNOX2Q96KN3 472 aa16.53■□□□□ 0.24
PRPF40B-202ENST00000380281 SENP3Q9H4L4 574 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-202ENST00000380281 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
PRPF40B-202ENST00000380281 WDR62O43379 1518 aa16.53■□□□□ 0.24
PRPF40B-202ENST00000380281 PZPP20742 1482 aa16.52■□□□□ 0.24
PRPF40B-202ENST00000380281 KIAA1107Q9UPP5 1409 aa16.51■□□□□ 0.23
PRPF40B-202ENST00000380281 CAMSAP2Q08AD1 1489 aa16.51■□□□□ 0.23
PRPF40B-202ENST00000380281 ROCK1Q13464 1354 aa16.5■□□□□ 0.23
PRPF40B-202ENST00000380281 GCC2Q8IWJ2 1684 aa16.49■□□□□ 0.23
PRPF40B-202ENST00000380281 TARBP1Q13395 1621 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-202ENST00000380281 RRP1P56182 461 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-202ENST00000380281 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-202ENST00000380281 WASHC2CQ9Y4E1 1318 aa16.48■□□□□ 0.23
PRPF40B-202ENST00000380281 SLC4A3P48751 1232 aa16.48■□□□□ 0.23
PRPF40B-202ENST00000380281 PANK3Q9H999 370 aa16.48■□□□□ 0.23
PRPF40B-202ENST00000380281 DISP1Q96F81 1524 aa16.47■□□□□ 0.23
PRPF40B-202ENST00000380281 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-202ENST00000380281 MYBBP1AQ9BQG0 1328 aaKnown RBP16.47■□□□□ 0.23
PRPF40B-202ENST00000380281 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.23
PRPF40B-202ENST00000380281 BCORL1Q5H9F3 1711 aa16.45■□□□□ 0.22
PRPF40B-202ENST00000380281 KIF15Q9NS87 1388 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms