RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 PROM2Q8N271 834 aa16.29■□□□□ 0.2
C9orf85-202ENST00000377027 TEX14Q8IWB6 1497 aa16.28■□□□□ 0.2
C9orf85-202ENST00000377027 MAGI3Q5TCQ9 1506 aa16.25■□□□□ 0.19
C9orf85-202ENST00000377027 ADGRL1O94910 1474 aa16.25■□□□□ 0.19
C9orf85-202ENST00000377027 ATP10BO94823 1461 aa16.24■□□□□ 0.19
C9orf85-202ENST00000377027 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
C9orf85-202ENST00000377027 P3H3Q8IVL6 736 aa16.22■□□□□ 0.19
C9orf85-202ENST00000377027 CD109Q6YHK3 1445 aa16.21■□□□□ 0.19
C9orf85-202ENST00000377027 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
C9orf85-202ENST00000377027 ARID3CA6NKF2 412 aa16.18■□□□□ 0.18
C9orf85-202ENST00000377027 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
C9orf85-202ENST00000377027 KIF21BO75037 1637 aa16.17■□□□□ 0.18
C9orf85-202ENST00000377027 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
C9orf85-202ENST00000377027 EEA1Q15075 1411 aa16.17■□□□□ 0.18
C9orf85-202ENST00000377027 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
C9orf85-202ENST00000377027 SPDYE1Q8NFV5 336 aaPredicted RBP16.14■□□□□ 0.17
C9orf85-202ENST00000377027 ARAP3Q8WWN8 1544 aa16.14■□□□□ 0.17
C9orf85-202ENST00000377027 PITPNM1O00562 1244 aa16.12■□□□□ 0.17
C9orf85-202ENST00000377027 FRMPD1Q5SYB0 1578 aa16.12■□□□□ 0.17
C9orf85-202ENST00000377027 FAM9AQ8IZU1 332 aaPredicted RBP16.09■□□□□ 0.17
C9orf85-202ENST00000377027 EFCAB5A4FU69 1503 aa16.08■□□□□ 0.16
C9orf85-202ENST00000377027 HECW2Q9P2P5 1572 aa16.06■□□□□ 0.16
C9orf85-202ENST00000377027 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
C9orf85-202ENST00000377027 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
C9orf85-202ENST00000377027 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
C9orf85-202ENST00000377027 NEO1Q92859 1461 aa16.03■□□□□ 0.16
C9orf85-202ENST00000377027 RICTORQ6R327 1708 aa16.03■□□□□ 0.16
C9orf85-202ENST00000377027 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
C9orf85-202ENST00000377027 CDK13Q14004 1512 aaKnown RBP16.03■□□□□ 0.16
C9orf85-202ENST00000377027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
C9orf85-202ENST00000377027 ADAMTSL3P82987 1691 aa16.02■□□□□ 0.16
C9orf85-202ENST00000377027 CHRDL2Q6WN34 429 aa16.01■□□□□ 0.15
C9orf85-202ENST00000377027 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
C9orf85-202ENST00000377027 SIGLEC1Q9BZZ2 1709 aa16■□□□□ 0.15
C9orf85-202ENST00000377027 RAPGEF3O95398 923 aa15.99■□□□□ 0.15
C9orf85-202ENST00000377027 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
C9orf85-202ENST00000377027 BCORL1Q5H9F3 1711 aa15.98■□□□□ 0.15
C9orf85-202ENST00000377027 PHLDB1Q86UU1 1377 aa15.98■□□□□ 0.15
C9orf85-202ENST00000377027 ARHGEF40Q8TER5 1519 aa15.97■□□□□ 0.15
C9orf85-202ENST00000377027 CFAP74Q9C0B2 1584 aa15.94■□□□□ 0.14
C9orf85-202ENST00000377027 MADDQ8WXG6 1647 aa15.94■□□□□ 0.14
C9orf85-202ENST00000377027 FANCAO15360 1455 aa15.93■□□□□ 0.14
C9orf85-202ENST00000377027 FBXO3Q9UK99 471 aa15.93■□□□□ 0.14
C9orf85-202ENST00000377027 KIF14Q15058 1648 aa15.93■□□□□ 0.14
C9orf85-202ENST00000377027 HECW1Q76N89 1606 aa15.93■□□□□ 0.14
C9orf85-202ENST00000377027 ZMYM4Q5VZL5 1548 aa15.93■□□□□ 0.14
C9orf85-202ENST00000377027 AKNAQ7Z591 1439 aa15.93■□□□□ 0.14
C9orf85-202ENST00000377027 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
C9orf85-202ENST00000377027 DENND4BO75064 1496 aaPredicted RBP15.91■□□□□ 0.14
C9orf85-202ENST00000377027 PTPRMP28827 1452 aa15.91■□□□□ 0.14
C9orf85-202ENST00000377027 MYO5CQ9NQX4 1742 aa15.89■□□□□ 0.13
C9orf85-202ENST00000377027 PLEKHD1A6NEE1 506 aa15.89■□□□□ 0.13
C9orf85-202ENST00000377027 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
C9orf85-202ENST00000377027 YEATS2Q9ULM3 1422 aa15.87■□□□□ 0.13
C9orf85-202ENST00000377027 RIMS1Q86UR5 1692 aaKnown RBP15.87■□□□□ 0.13
C9orf85-202ENST00000377027 PLCH2O75038 1416 aa15.85■□□□□ 0.13
C9orf85-202ENST00000377027 PCF11O94913 1555 aaKnown RBP15.85■□□□□ 0.13
C9orf85-202ENST00000377027 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
C9orf85-202ENST00000377027 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
C9orf85-202ENST00000377027 FXR2P51116 673 aaKnown RBP eCLIP15.84■□□□□ 0.13
C9orf85-202ENST00000377027 POGZQ7Z3K3 1410 aa15.84■□□□□ 0.13
C9orf85-202ENST00000377027 CDC42BPBQ9Y5S2 1711 aa15.83■□□□□ 0.13
C9orf85-202ENST00000377027 ILDR1Q86SU0 546 aaPredicted RBP15.82■□□□□ 0.12
C9orf85-202ENST00000377027 LMTK3Q96Q04 1460 aa15.8■□□□□ 0.12
C9orf85-202ENST00000377027 TROQ12816 1431 aaPredicted RBP15.8■□□□□ 0.12
C9orf85-202ENST00000377027 SCAPERQ9BY12 1400 aa15.8■□□□□ 0.12
C9orf85-202ENST00000377027 PIP4P2Q8N4L2 257 aa15.8■□□□□ 0.12
C9orf85-202ENST00000377027 FER1L4A9Z1Z3 1794 aa15.79■□□□□ 0.12
C9orf85-202ENST00000377027 KDM5CP41229 1560 aa15.79■□□□□ 0.12
C9orf85-202ENST00000377027 MAGI2Q86UL8 1455 aa15.78■□□□□ 0.12
C9orf85-202ENST00000377027 PREX2Q70Z35 1606 aa15.78■□□□□ 0.12
C9orf85-202ENST00000377027 CDC42BPAQ5VT25 1732 aa15.76■□□□□ 0.11
C9orf85-202ENST00000377027 CASKIN1Q8WXD9 1431 aa15.76■□□□□ 0.11
C9orf85-202ENST00000377027 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
C9orf85-202ENST00000377027 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
C9orf85-202ENST00000377027 ARHGAP5Q13017 1502 aa15.74■□□□□ 0.11
C9orf85-202ENST00000377027 ARHGEF12Q9NZN5 1544 aa15.74■□□□□ 0.11
C9orf85-202ENST00000377027 ABCA6Q8N139 1617 aa15.74■□□□□ 0.11
C9orf85-202ENST00000377027 DIP2CQ9Y2E4 1556 aa15.74■□□□□ 0.11
C9orf85-202ENST00000377027 ITSN2Q9NZM3 1697 aa15.73■□□□□ 0.11
C9orf85-202ENST00000377027 ABCC1P33527 1531 aa15.73■□□□□ 0.11
C9orf85-202ENST00000377027 VASPP50552 380 aaPredicted RBP15.72■□□□□ 0.11
C9orf85-202ENST00000377027 CREBZFQ9NS37 354 aa15.72■□□□□ 0.11
C9orf85-202ENST00000377027 ATP10AO60312 1499 aa15.71■□□□□ 0.11
C9orf85-202ENST00000377027 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
C9orf85-202ENST00000377027 ZNF518AQ6AHZ1 1483 aa15.71■□□□□ 0.1
C9orf85-202ENST00000377027 C9orf84Q5VXU9 1444 aa15.7■□□□□ 0.1
C9orf85-202ENST00000377027 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
C9orf85-202ENST00000377027 MIER1Q8N108 512 aa15.7■□□□□ 0.1
C9orf85-202ENST00000377027 FYCO1Q9BQS8 1478 aa15.7■□□□□ 0.1
C9orf85-202ENST00000377027 CLIP1P30622 1438 aa15.69■□□□□ 0.1
C9orf85-202ENST00000377027 EFCAB2Q5VUJ9 269 aa15.69■□□□□ 0.1
C9orf85-202ENST00000377027 KIDINS220Q9ULH0 1771 aa15.68■□□□□ 0.1
C9orf85-202ENST00000377027 REREQ9P2R6 1566 aa15.68■□□□□ 0.1
C9orf85-202ENST00000377027 CHADLQ6NUI6 762 aa15.68■□□□□ 0.1
C9orf85-202ENST00000377027 TRAPPC8Q9Y2L5 1435 aa15.68■□□□□ 0.1
C9orf85-202ENST00000377027 AFAP1Q8N556 730 aa15.67■□□□□ 0.1
C9orf85-202ENST00000377027 CDK11AQ9UQ88 783 aaPredicted RBP15.67■□□□□ 0.1
C9orf85-202ENST00000377027 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
C9orf85-202ENST00000377027 MLECQ14165 292 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms