RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 PPARGC1BQ86YN6 1023 aaKnown RBP26.19■■□□□ 1.78
HLA-F-218ENST00000376861 CFDP1Q9UEE9 299 aaPredicted RBP26.19■■□□□ 1.78
HLA-F-218ENST00000376861 ARAP3Q8WWN8 1544 aa26.18■■□□□ 1.78
HLA-F-218ENST00000376861 NEO1Q92859 1461 aa26.18■■□□□ 1.78
HLA-F-218ENST00000376861 PHLDB1Q86UU1 1377 aa26.18■■□□□ 1.78
HLA-F-218ENST00000376861 ZNF777Q9ULD5 760 aaPredicted RBP26.18■■□□□ 1.78
HLA-F-218ENST00000376861 CDC42BPBQ9Y5S2 1711 aa26.17■■□□□ 1.78
HLA-F-218ENST00000376861 GPATCH8Q9UKJ3 1502 aaKnown RBP26.16■■□□□ 1.78
HLA-F-218ENST00000376861 KDM6BO15054 1643 aa26.14■■□□□ 1.78
HLA-F-218ENST00000376861 AKNAQ7Z591 1439 aa26.14■■□□□ 1.77
HLA-F-218ENST00000376861 ADGRL1O94910 1474 aa26.09■■□□□ 1.77
HLA-F-218ENST00000376861 MYOM3Q5VTT5 1437 aa26.08■■□□□ 1.77
HLA-F-218ENST00000376861 SCAPERQ9BY12 1400 aa26.04■■□□□ 1.76
HLA-F-218ENST00000376861 DENND4BO75064 1496 aaPredicted RBP26.03■■□□□ 1.76
HLA-F-218ENST00000376861 PLEKHH2Q8IVE3 1493 aa26.02■■□□□ 1.76
HLA-F-218ENST00000376861 MIA2Q96PC5 1412 aa26.02■■□□□ 1.76
HLA-F-218ENST00000376861 SAMD9LQ8IVG5 1584 aa26.01■■□□□ 1.75
HLA-F-218ENST00000376861 RAPGEF3O95398 923 aa26■■□□□ 1.75
HLA-F-218ENST00000376861 ABCC1P33527 1531 aa25.99■■□□□ 1.75
HLA-F-218ENST00000376861 MYT1LQ9UL68 1186 aa25.98■■□□□ 1.75
HLA-F-218ENST00000376861 ZNF644Q9H582 1327 aaPredicted RBP25.98■■□□□ 1.75
HLA-F-218ENST00000376861 COL17A1Q9UMD9 1497 aaPredicted RBP25.97■■□□□ 1.75
HLA-F-218ENST00000376861 HNRNPMP52272 730 aaKnown RBP eCLIP25.97■■□□□ 1.75
HLA-F-218ENST00000376861 CAMSAP2Q08AD1 1489 aa25.97■■□□□ 1.75
HLA-F-218ENST00000376861 FGD6Q6ZV73 1430 aa25.96■■□□□ 1.75
HLA-F-218ENST00000376861 SYCP2Q9BX26 1530 aa25.95■■□□□ 1.75
HLA-F-218ENST00000376861 KIAA1107Q9UPP5 1409 aa25.95■■□□□ 1.74
HLA-F-218ENST00000376861 ZNF518AQ6AHZ1 1483 aa25.95■■□□□ 1.74
HLA-F-218ENST00000376861 PTPN23Q9H3S7 1636 aa25.94■■□□□ 1.74
HLA-F-218ENST00000376861 POGZQ7Z3K3 1410 aa25.94■■□□□ 1.74
HLA-F-218ENST00000376861 FAM50AQ14320 339 aaKnown RBP25.93■■□□□ 1.74
HLA-F-218ENST00000376861 RICTORQ6R327 1708 aa25.92■■□□□ 1.74
HLA-F-218ENST00000376861 RSPH4AQ5TD94 716 aa25.91■■□□□ 1.74
HLA-F-218ENST00000376861 AFAP1Q8N556 730 aa25.91■■□□□ 1.74
HLA-F-218ENST00000376861 ARHGEF12Q9NZN5 1544 aa25.89■■□□□ 1.74
HLA-F-218ENST00000376861 TRAPPC8Q9Y2L5 1435 aa25.88■■□□□ 1.73
HLA-F-218ENST00000376861 FRMPD1Q5SYB0 1578 aa25.87■■□□□ 1.73
HLA-F-218ENST00000376861 TSPY4P0CV99 314 aa25.86■■□□□ 1.73
HLA-F-218ENST00000376861 TSPY10P0CW01 314 aa25.86■■□□□ 1.73
HLA-F-218ENST00000376861 SPAG9O60271 1321 aaKnown RBP25.84■■□□□ 1.73
HLA-F-218ENST00000376861 CCDC141Q6ZP82 1450 aa25.84■■□□□ 1.73
HLA-F-218ENST00000376861 TCOF1Q13428 1488 aaKnown RBP25.83■■□□□ 1.73
HLA-F-218ENST00000376861 MBD5Q9P267 1494 aa25.82■■□□□ 1.72
HLA-F-218ENST00000376861 ZMYM4Q5VZL5 1548 aa25.82■■□□□ 1.72
HLA-F-218ENST00000376861 KDM5CP41229 1560 aa25.81■■□□□ 1.72
HLA-F-218ENST00000376861 ARHGEF5Q12774 1597 aa25.81■■□□□ 1.72
HLA-F-218ENST00000376861 MAGI2Q86UL8 1455 aa25.81■■□□□ 1.72
HLA-F-218ENST00000376861 HECW2Q9P2P5 1572 aa25.81■■□□□ 1.72
HLA-F-218ENST00000376861 ZFYVE16Q7Z3T8 1539 aa25.79■■□□□ 1.72
HLA-F-218ENST00000376861 MLH3Q9UHC1 1453 aa25.76■■□□□ 1.71
HLA-F-218ENST00000376861 TRIM26Q12899 539 aaPredicted RBP25.75■■□□□ 1.71
HLA-F-218ENST00000376861 DNMT1P26358 1616 aaKnown RBP25.74■■□□□ 1.71
HLA-F-218ENST00000376861 RRBP1Q9P2E9 1410 aaKnown RBP25.74■■□□□ 1.71
HLA-F-218ENST00000376861 ITGAEP38570 1179 aa25.73■■□□□ 1.71
HLA-F-218ENST00000376861 DAPK1P53355 1430 aa25.73■■□□□ 1.71
HLA-F-218ENST00000376861 ATP7AQ04656 1500 aa25.73■■□□□ 1.71
HLA-F-218ENST00000376861 ARHGEF40Q8TER5 1519 aa25.72■■□□□ 1.71
HLA-F-218ENST00000376861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.72■■□□□ 1.71
HLA-F-218ENST00000376861 YEATS2Q9ULM3 1422 aa25.71■■□□□ 1.71
HLA-F-218ENST00000376861 KIDINS220Q9ULH0 1771 aa25.71■■□□□ 1.71
HLA-F-218ENST00000376861 RTEL1-TNFRSF6BF6WH68 1400 aa25.7■■□□□ 1.71
HLA-F-218ENST00000376861 ABCC5O15440 1437 aa25.7■■□□□ 1.71
HLA-F-218ENST00000376861 CROCC2H7BZ55 1655 aa25.7■■□□□ 1.7
HLA-F-218ENST00000376861 C9orf84Q5VXU9 1444 aa25.7■■□□□ 1.7
HLA-F-218ENST00000376861 INO80Q9ULG1 1556 aaPredicted RBP25.69■■□□□ 1.7
HLA-F-218ENST00000376861 ARID4BQ4LE39 1312 aaPredicted RBP25.69■■□□□ 1.7
HLA-F-218ENST00000376861 CHIC2Q9UKJ5 165 aa25.68■■□□□ 1.7
HLA-F-218ENST00000376861 ATP10AO60312 1499 aa25.67■■□□□ 1.7
HLA-F-218ENST00000376861 SHANK2Q9UPX8 1470 aa25.66■■□□□ 1.7
HLA-F-218ENST00000376861 ABCA6Q8N139 1617 aa25.66■■□□□ 1.7
HLA-F-218ENST00000376861 MAST1Q9Y2H9 1570 aa25.65■■□□□ 1.7
HLA-F-218ENST00000376861 DIP2CQ9Y2E4 1556 aa25.64■■□□□ 1.7
HLA-F-218ENST00000376861 ADGBQ8N7X0 1667 aa25.63■■□□□ 1.69
HLA-F-218ENST00000376861 ANKRD30AQ9BXX3 1397 aa25.62■■□□□ 1.69
HLA-F-218ENST00000376861 RRP7BPQ9NSQ0 103 aa25.6■■□□□ 1.69
HLA-F-218ENST00000376861 A2MP01023 1474 aa25.58■■□□□ 1.69
HLA-F-218ENST00000376861 PLXNC1O60486 1568 aa25.57■■□□□ 1.68
HLA-F-218ENST00000376861 KIF15Q9NS87 1388 aa25.55■■□□□ 1.68
HLA-F-218ENST00000376861 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
HLA-F-218ENST00000376861 REREQ9P2R6 1566 aa25.55■■□□□ 1.68
HLA-F-218ENST00000376861 DHX29Q7Z478 1369 aaKnown RBP25.53■■□□□ 1.68
HLA-F-218ENST00000376861 NCOA1Q15788 1441 aa25.52■■□□□ 1.68
HLA-F-218ENST00000376861 ADGRL2O95490 1459 aa25.52■■□□□ 1.68
HLA-F-218ENST00000376861 MLECQ14165 292 aa25.52■■□□□ 1.68
HLA-F-218ENST00000376861 PTPRKQ15262 1439 aa25.52■■□□□ 1.68
HLA-F-218ENST00000376861 DUOX2Q9NRD8 1548 aa25.51■■□□□ 1.67
HLA-F-218ENST00000376861 ROCK1Q13464 1354 aa25.5■■□□□ 1.67
HLA-F-218ENST00000376861 KIF3BO15066 747 aa25.48■■□□□ 1.67
HLA-F-218ENST00000376861 AGLP35573 1532 aa25.47■■□□□ 1.67
HLA-F-218ENST00000376861 ESF1Q9H501 851 aaKnown RBP25.47■■□□□ 1.67
HLA-F-218ENST00000376861 SIGLEC1Q9BZZ2 1709 aa25.45■■□□□ 1.67
HLA-F-218ENST00000376861 GGT6Q6P531 493 aa25.45■■□□□ 1.66
HLA-F-218ENST00000376861 ERBINQ96RT1 1412 aa25.43■■□□□ 1.66
HLA-F-218ENST00000376861 BCORL1Q5H9F3 1711 aa25.43■■□□□ 1.66
HLA-F-218ENST00000376861 EIF2AK4Q9P2K8 1649 aaKnown RBP25.41■■□□□ 1.66
HLA-F-218ENST00000376861 ANKRD50Q9ULJ7 1429 aa25.41■■□□□ 1.66
HLA-F-218ENST00000376861 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.35■■□□□ 1.65
HLA-F-218ENST00000376861 FER1L4A9Z1Z3 1794 aa25.34■■□□□ 1.65
HLA-F-218ENST00000376861 PPP6R1Q9UPN7 881 aa25.34■■□□□ 1.65
HLA-F-218ENST00000376861 GCC2Q8IWJ2 1684 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms