RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 NISCHQ9Y2I1 1504 aa40.1■■■■■ 4.01
HLA-F-218ENST00000376861 CCDC180Q9P1Z9 1646 aa35.51■■■■□ 3.27
HLA-F-218ENST00000376861 ABCC9O60706 1549 aa34.42■■■■□ 3.1
HLA-F-218ENST00000376861 DCAF8L2P0C7V8 631 aa33.58■■■□□ 2.97
HLA-F-218ENST00000376861 ZCCHC6Q5VYS8 1495 aaKnown RBP33.46■■■□□ 2.95
HLA-F-218ENST00000376861 NACADO15069 1562 aa33.31■■■□□ 2.92
HLA-F-218ENST00000376861 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
HLA-F-218ENST00000376861 DCAF1Q9Y4B6 1507 aa33.16■■■□□ 2.9
HLA-F-218ENST00000376861 MYO15BQ96JP2 1530 aa33.15■■■□□ 2.9
HLA-F-218ENST00000376861 UNC13AQ9UPW8 1703 aa32.48■■■□□ 2.79
HLA-F-218ENST00000376861 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
HLA-F-218ENST00000376861 PABPN1Q86U42 306 aaKnown RBP eCLIP32.24■■■□□ 2.75
HLA-F-218ENST00000376861 BICRAQ9NZM4 1560 aa32.14■■■□□ 2.73
HLA-F-218ENST00000376861 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
HLA-F-218ENST00000376861 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
HLA-F-218ENST00000376861 CECR2Q9BXF3 1484 aa31.17■■■□□ 2.58
HLA-F-218ENST00000376861 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.57
HLA-F-218ENST00000376861 CC2D2AQ9P2K1 1620 aa31.13■■■□□ 2.57
HLA-F-218ENST00000376861 BAZ1AQ9NRL2 1556 aaPredicted RBP31.11■■■□□ 2.57
HLA-F-218ENST00000376861 SMARCA4P51532 1647 aa31.05■■■□□ 2.56
HLA-F-218ENST00000376861 MROH2BQ7Z745 1585 aa30.9■■■□□ 2.54
HLA-F-218ENST00000376861 SMARCA2P51531 1590 aa30.81■■■□□ 2.52
HLA-F-218ENST00000376861 ATAD2BQ9ULI0 1458 aa30.77■■■□□ 2.52
HLA-F-218ENST00000376861 PEG3Q9GZU2 1588 aa30.68■■■□□ 2.5
HLA-F-218ENST00000376861 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
HLA-F-218ENST00000376861 RSF1Q96T23 1441 aaPredicted RBP30.68■■■□□ 2.5
HLA-F-218ENST00000376861 WIZO95785 1651 aa30.63■■■□□ 2.49
HLA-F-218ENST00000376861 BAZ1BQ9UIG0 1483 aaKnown RBP30.61■■■□□ 2.49
HLA-F-218ENST00000376861 HMGXB3Q12766 1538 aa30.58■■■□□ 2.49
HLA-F-218ENST00000376861 SUPT5HO00267 1087 aaKnown RBP30.37■■■□□ 2.45
HLA-F-218ENST00000376861 TOP2AP11388 1531 aaKnown RBP30.31■■■□□ 2.44
HLA-F-218ENST00000376861 CCDC88BA6NC98 1476 aa29.96■■■□□ 2.39
HLA-F-218ENST00000376861 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
HLA-F-218ENST00000376861 CADPSQ9ULU8 1353 aa29.86■■■□□ 2.37
HLA-F-218ENST00000376861 NESP48681 1621 aa29.84■■■□□ 2.37
HLA-F-218ENST00000376861 ERCC6Q03468 1493 aa29.72■■■□□ 2.35
HLA-F-218ENST00000376861 CFTRP13569 1480 aa29.72■■■□□ 2.35
HLA-F-218ENST00000376861 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
HLA-F-218ENST00000376861 PRDM2Q13029 1718 aa29.6■■■□□ 2.33
HLA-F-218ENST00000376861 KIF21AQ7Z4S6 1674 aa29.54■■■□□ 2.32
HLA-F-218ENST00000376861 FANCD2Q9BXW9 1451 aa29.53■■■□□ 2.32
HLA-F-218ENST00000376861 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
HLA-F-218ENST00000376861 MRC2Q9UBG0 1479 aa29.33■■■□□ 2.29
HLA-F-218ENST00000376861 THOC2Q8NI27 1593 aaKnown RBP29.29■■■□□ 2.28
HLA-F-218ENST00000376861 WDR62O43379 1518 aa29.18■■■□□ 2.26
HLA-F-218ENST00000376861 CUX2O14529 1486 aa29.17■■■□□ 2.26
HLA-F-218ENST00000376861 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
HLA-F-218ENST00000376861 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
HLA-F-218ENST00000376861 DNMBPQ6XZF7 1577 aa29.08■■■□□ 2.25
HLA-F-218ENST00000376861 TOPBP1Q92547 1522 aa29.08■■■□□ 2.25
HLA-F-218ENST00000376861 WRNQ14191 1432 aaPredicted RBP eCLIP28.99■■■□□ 2.23
HLA-F-218ENST00000376861 CUX1P39880 1505 aa28.97■■■□□ 2.23
HLA-F-218ENST00000376861 TOP2BQ02880 1626 aa28.85■■■□□ 2.21
HLA-F-218ENST00000376861 FGD5Q6ZNL6 1462 aa28.85■■■□□ 2.21
HLA-F-218ENST00000376861 POLA1P09884 1462 aaPredicted RBP28.84■■■□□ 2.21
HLA-F-218ENST00000376861 SYNJ1O43426 1573 aa28.84■■■□□ 2.21
HLA-F-218ENST00000376861 BIVM-ERCC5R4GMW8 1640 aa28.84■■■□□ 2.21
HLA-F-218ENST00000376861 IFT140Q96RY7 1462 aa28.82■■■□□ 2.2
HLA-F-218ENST00000376861 SOGA1O94964 1423 aa28.79■■■□□ 2.2
HLA-F-218ENST00000376861 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
HLA-F-218ENST00000376861 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
HLA-F-218ENST00000376861 TRIM41Q8WV44 630 aa28.68■■■□□ 2.18
HLA-F-218ENST00000376861 ZNF608Q9ULD9 1512 aaPredicted RBP28.61■■■□□ 2.17
HLA-F-218ENST00000376861 ABCA10Q8WWZ4 1543 aa28.57■■■□□ 2.16
HLA-F-218ENST00000376861 TDRD9Q8NDG6 1382 aaKnown RBP28.56■■■□□ 2.16
HLA-F-218ENST00000376861 EIF4G3O43432 1585 aaKnown RBP28.55■■■□□ 2.16
HLA-F-218ENST00000376861 WDR97A6NE52 1622 aa28.55■■■□□ 2.16
HLA-F-218ENST00000376861 AQRO60306 1485 aaKnown RBP eCLIP28.54■■■□□ 2.16
HLA-F-218ENST00000376861 GAPVD1Q14C86 1478 aa28.46■■■□□ 2.15
HLA-F-218ENST00000376861 CHIC1Q5VXU3 224 aa28.45■■■□□ 2.15
HLA-F-218ENST00000376861 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
HLA-F-218ENST00000376861 GRIN2BQ13224 1484 aa28.39■■■□□ 2.14
HLA-F-218ENST00000376861 KIF27Q86VH2 1401 aa28.39■■■□□ 2.14
HLA-F-218ENST00000376861 PBRM1Q86U86 1689 aa28.38■■■□□ 2.13
HLA-F-218ENST00000376861 SNAPC4Q5SXM2 1469 aa28.29■■■□□ 2.12
HLA-F-218ENST00000376861 FBLN2P98095 1184 aa28.28■■■□□ 2.12
HLA-F-218ENST00000376861 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
HLA-F-218ENST00000376861 ERICH3Q5RHP9 1530 aa28.26■■■□□ 2.11
HLA-F-218ENST00000376861 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
HLA-F-218ENST00000376861 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
HLA-F-218ENST00000376861 RUSC2Q8N2Y8 1516 aa28.15■■■□□ 2.1
HLA-F-218ENST00000376861 CHD1O14646 1710 aa28.15■■■□□ 2.1
HLA-F-218ENST00000376861 IGF1RP08069 1367 aa28.14■■■□□ 2.1
HLA-F-218ENST00000376861 ADAMTS12P58397 1594 aa28.13■■■□□ 2.09
HLA-F-218ENST00000376861 FHAD1B1AJZ9 1412 aa28.13■■■□□ 2.09
HLA-F-218ENST00000376861 CUL7Q14999 1698 aa28.12■■■□□ 2.09
HLA-F-218ENST00000376861 OSCARQ8IYS5 282 aa28.11■■■□□ 2.09
HLA-F-218ENST00000376861 EEA1Q15075 1411 aa28.09■■■□□ 2.09
HLA-F-218ENST00000376861 FAM9AQ8IZU1 332 aaPredicted RBP28.08■■■□□ 2.08
HLA-F-218ENST00000376861 CARMIL1Q5VZK9 1371 aa28.05■■■□□ 2.08
HLA-F-218ENST00000376861 GRIN2AQ12879 1464 aa28.01■■■□□ 2.07
HLA-F-218ENST00000376861 CSRNP3Q8WYN3 585 aa28.01■■■□□ 2.07
HLA-F-218ENST00000376861 RAPGEF2Q9Y4G8 1499 aa27.93■■■□□ 2.06
HLA-F-218ENST00000376861 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
HLA-F-218ENST00000376861 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
HLA-F-218ENST00000376861 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
HLA-F-218ENST00000376861 NUP160Q12769 1436 aa27.82■■■□□ 2.04
HLA-F-218ENST00000376861 CLASP1Q7Z460 1538 aa27.77■■■□□ 2.04
HLA-F-218ENST00000376861 KIF21BO75037 1637 aa27.73■■■□□ 2.03
HLA-F-218ENST00000376861 EHMT2Q96KQ7 1210 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms