RNA–Protein interactions for RNA: ENST00000376400.3

CFTRP3-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 3, humanhuman

BASIC

Gene CFTRP3, Length 212 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP3-201ENST00000376400 RAPGEF2Q9Y4G8 1499 aa16.8■□□□□ 0.28
CFTRP3-201ENST00000376400 UGGT2Q9NYU1 1516 aa16.8■□□□□ 0.28
CFTRP3-201ENST00000376400 UHRF1BP1LA0JNW5 1464 aa16.8■□□□□ 0.28
CFTRP3-201ENST00000376400 KDM6BO15054 1643 aa16.79■□□□□ 0.28
CFTRP3-201ENST00000376400 CD44P16070 742 aaKnown RBP16.78■□□□□ 0.28
CFTRP3-201ENST00000376400 PPRC1Q5VV67 1664 aaKnown RBP16.77■□□□□ 0.28
CFTRP3-201ENST00000376400 KIAA0556O60303 1618 aa16.76■□□□□ 0.27
CFTRP3-201ENST00000376400 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
CFTRP3-201ENST00000376400 TTBK1Q5TCY1 1321 aaPredicted RBP16.75■□□□□ 0.27
CFTRP3-201ENST00000376400 IFNLR1Q8IU57 520 aaPredicted RBP16.75■□□□□ 0.27
CFTRP3-201ENST00000376400 ASXL2Q76L83 1435 aa16.75■□□□□ 0.27
CFTRP3-201ENST00000376400 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
CFTRP3-201ENST00000376400 GLI2P10070 1586 aa16.75■□□□□ 0.27
CFTRP3-201ENST00000376400 PLB1Q6P1J6 1458 aa16.73■□□□□ 0.27
CFTRP3-201ENST00000376400 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
CFTRP3-201ENST00000376400 ZCCHC11Q5TAX3 1644 aaKnown RBP16.71■□□□□ 0.27
CFTRP3-201ENST00000376400 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
CFTRP3-201ENST00000376400 EVX2Q03828 476 aa16.71■□□□□ 0.27
CFTRP3-201ENST00000376400 MAP3K4Q9Y6R4 1608 aa16.68■□□□□ 0.26
CFTRP3-201ENST00000376400 EPRSP07814 1512 aaKnown RBP16.66■□□□□ 0.26
CFTRP3-201ENST00000376400 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
CFTRP3-201ENST00000376400 PRXQ9BXM0 1461 aa16.66■□□□□ 0.26
CFTRP3-201ENST00000376400 NUBP1P53384 320 aa16.65■□□□□ 0.26
CFTRP3-201ENST00000376400 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
CFTRP3-201ENST00000376400 TSPYL2Q9H2G4 693 aaPredicted RBP16.63■□□□□ 0.25
CFTRP3-201ENST00000376400 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
CFTRP3-201ENST00000376400 ABCA8O94911 1581 aa16.62■□□□□ 0.25
CFTRP3-201ENST00000376400 SP7Q8TDD2 431 aaPredicted RBP16.61■□□□□ 0.25
CFTRP3-201ENST00000376400 SPOCK2Q92563 424 aa16.61■□□□□ 0.25
CFTRP3-201ENST00000376400 COL17A1Q9UMD9 1497 aaPredicted RBP16.61■□□□□ 0.25
CFTRP3-201ENST00000376400 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
CFTRP3-201ENST00000376400 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
CFTRP3-201ENST00000376400 FAM212AQ96EL1 285 aa16.57■□□□□ 0.24
CFTRP3-201ENST00000376400 TEX14Q8IWB6 1497 aa16.56■□□□□ 0.24
CFTRP3-201ENST00000376400 CFAP43Q8NDM7 1665 aa16.54■□□□□ 0.24
CFTRP3-201ENST00000376400 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
CFTRP3-201ENST00000376400 ZNF579Q8NAF0 562 aaKnown RBP16.52■□□□□ 0.24
CFTRP3-201ENST00000376400 SAMD9Q5K651 1589 aa16.5■□□□□ 0.23
CFTRP3-201ENST00000376400 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
CFTRP3-201ENST00000376400 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
CFTRP3-201ENST00000376400 CCDC61Q9Y6R9 512 aa16.49■□□□□ 0.23
CFTRP3-201ENST00000376400 GSE1Q14687 1217 aa16.47■□□□□ 0.23
CFTRP3-201ENST00000376400 CD109Q6YHK3 1445 aa16.46■□□□□ 0.23
CFTRP3-201ENST00000376400 CLCN6P51797 869 aa16.46■□□□□ 0.23
CFTRP3-201ENST00000376400 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
CFTRP3-201ENST00000376400 ATP10BO94823 1461 aa16.44■□□□□ 0.22
CFTRP3-201ENST00000376400 GABBR2O75899 941 aa16.43■□□□□ 0.22
CFTRP3-201ENST00000376400 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
CFTRP3-201ENST00000376400 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
CFTRP3-201ENST00000376400 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
CFTRP3-201ENST00000376400 CIZ1Q9ULV3 898 aaPredicted RBP16.41■□□□□ 0.22
CFTRP3-201ENST00000376400 ABCA9Q8IUA7 1624 aa16.41■□□□□ 0.22
CFTRP3-201ENST00000376400 EEA1Q15075 1411 aa16.39■□□□□ 0.21
CFTRP3-201ENST00000376400 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
CFTRP3-201ENST00000376400 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
CFTRP3-201ENST00000376400 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
CFTRP3-201ENST00000376400 KIF21BO75037 1637 aa16.35■□□□□ 0.21
CFTRP3-201ENST00000376400 KIF12Q96FN5 646 aa16.34■□□□□ 0.21
CFTRP3-201ENST00000376400 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
CFTRP3-201ENST00000376400 PYGBP11216 843 aa16.31■□□□□ 0.2
CFTRP3-201ENST00000376400 FAM9AQ8IZU1 332 aaPredicted RBP16.31■□□□□ 0.2
CFTRP3-201ENST00000376400 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
CFTRP3-201ENST00000376400 MAP3K13O43283 966 aa16.29■□□□□ 0.2
CFTRP3-201ENST00000376400 FRMPD1Q5SYB0 1578 aa16.29■□□□□ 0.2
CFTRP3-201ENST00000376400 NEO1Q92859 1461 aa16.29■□□□□ 0.2
CFTRP3-201ENST00000376400 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
CFTRP3-201ENST00000376400 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
CFTRP3-201ENST00000376400 EFCAB5A4FU69 1503 aa16.28■□□□□ 0.2
CFTRP3-201ENST00000376400 MS4A3Q96HJ5 214 aa16.25■□□□□ 0.19
CFTRP3-201ENST00000376400 RANGAP1P46060 587 aaPredicted RBP16.24■□□□□ 0.19
CFTRP3-201ENST00000376400 SGIP1Q9BQI5 828 aa16.24■□□□□ 0.19
CFTRP3-201ENST00000376400 PCDHB13Q9Y5F0 798 aa16.24■□□□□ 0.19
CFTRP3-201ENST00000376400 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
CFTRP3-201ENST00000376400 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
CFTRP3-201ENST00000376400 RICTORQ6R327 1708 aa16.22■□□□□ 0.19
CFTRP3-201ENST00000376400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.21■□□□□ 0.19
CFTRP3-201ENST00000376400 RAPGEF3O95398 923 aa16.21■□□□□ 0.19
CFTRP3-201ENST00000376400 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.18
CFTRP3-201ENST00000376400 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
CFTRP3-201ENST00000376400 CDK13Q14004 1512 aaKnown RBP16.19■□□□□ 0.18
CFTRP3-201ENST00000376400 CFAP74Q9C0B2 1584 aa16.18■□□□□ 0.18
CFTRP3-201ENST00000376400 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
CFTRP3-201ENST00000376400 DCBLD2Q96PD2 775 aa16.17■□□□□ 0.18
CFTRP3-201ENST00000376400 ARHGEF40Q8TER5 1519 aa16.17■□□□□ 0.18
CFTRP3-201ENST00000376400 FANCAO15360 1455 aa16.16■□□□□ 0.18
CFTRP3-201ENST00000376400 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
CFTRP3-201ENST00000376400 PTPRMP28827 1452 aa16.15■□□□□ 0.18
CFTRP3-201ENST00000376400 AKNAQ7Z591 1439 aa16.14■□□□□ 0.17
CFTRP3-201ENST00000376400 MADDQ8WXG6 1647 aa16.14■□□□□ 0.17
CFTRP3-201ENST00000376400 DENND4BO75064 1496 aaPredicted RBP16.14■□□□□ 0.17
CFTRP3-201ENST00000376400 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
CFTRP3-201ENST00000376400 ZMYM4Q5VZL5 1548 aa16.14■□□□□ 0.17
CFTRP3-201ENST00000376400 SIGLEC1Q9BZZ2 1709 aa16.13■□□□□ 0.17
CFTRP3-201ENST00000376400 HECW1Q76N89 1606 aa16.12■□□□□ 0.17
CFTRP3-201ENST00000376400 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
CFTRP3-201ENST00000376400 LRRIQ1Q96JM4 1722 aa16.11■□□□□ 0.17
CFTRP3-201ENST00000376400 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
CFTRP3-201ENST00000376400 PKD2Q13563 968 aa16.1■□□□□ 0.17
CFTRP3-201ENST00000376400 PCDHB8Q9UN66 801 aa16.1■□□□□ 0.17
CFTRP3-201ENST00000376400 FMN1Q68DA7 1419 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms