RNA–Protein interactions for RNA: ENST00000376400.3

CFTRP3-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 3, humanhuman

BASIC

Gene CFTRP3, Length 212 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP3-201ENST00000376400 AEBP2Q6ZN18 517 aaPredicted RBP32.43■■■□□ 2.78
CFTRP3-201ENST00000376400 CHIC1Q5VXU3 224 aa31.51■■■□□ 2.63
CFTRP3-201ENST00000376400 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
CFTRP3-201ENST00000376400 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
CFTRP3-201ENST00000376400 FOXD1Q16676 465 aa25.62■■□□□ 1.69
CFTRP3-201ENST00000376400 PLPPR3Q6T4P5 718 aa25.54■■□□□ 1.68
CFTRP3-201ENST00000376400 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
CFTRP3-201ENST00000376400 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
CFTRP3-201ENST00000376400 ADRA2BP18089 450 aa24.47■■□□□ 1.51
CFTRP3-201ENST00000376400 PIAS4Q8N2W9 510 aaPredicted RBP24.14■■□□□ 1.45
CFTRP3-201ENST00000376400 MSH5O43196 834 aa23.75■■□□□ 1.39
CFTRP3-201ENST00000376400 PPP4R3CPQ6ZMV5 832 aa22.46■■□□□ 1.19
CFTRP3-201ENST00000376400 SCAF1Q9H7N4 1312 aaKnown RBP22.46■■□□□ 1.19
CFTRP3-201ENST00000376400 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
CFTRP3-201ENST00000376400 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
CFTRP3-201ENST00000376400 ABCC9O60706 1549 aa22■■□□□ 1.11
CFTRP3-201ENST00000376400 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
CFTRP3-201ENST00000376400 POTEDQ86YR6 584 aa21.95■■□□□ 1.1
CFTRP3-201ENST00000376400 CNKSR2Q8WXI2 1034 aa21.89■■□□□ 1.09
CFTRP3-201ENST00000376400 NCBP3Q53F19 620 aaKnown RBP21.85■■□□□ 1.09
CFTRP3-201ENST00000376400 KCNA4P22459 653 aa21.68■■□□□ 1.06
CFTRP3-201ENST00000376400 RNF216Q9NWF9 866 aaPredicted RBP21.51■■□□□ 1.03
CFTRP3-201ENST00000376400 NPM3O75607 178 aaKnown RBP21.47■■□□□ 1.03
CFTRP3-201ENST00000376400 HOXD11P31277 338 aaPredicted RBP21.45■■□□□ 1.02
CFTRP3-201ENST00000376400 DCAF8L1A6NGE4 600 aa21.11■□□□□ 0.97
CFTRP3-201ENST00000376400 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
CFTRP3-201ENST00000376400 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
CFTRP3-201ENST00000376400 NACADO15069 1562 aa20.81■□□□□ 0.92
CFTRP3-201ENST00000376400 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
CFTRP3-201ENST00000376400 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
CFTRP3-201ENST00000376400 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
CFTRP3-201ENST00000376400 MYO15BQ96JP2 1530 aa20.54■□□□□ 0.88
CFTRP3-201ENST00000376400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
CFTRP3-201ENST00000376400 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
CFTRP3-201ENST00000376400 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
CFTRP3-201ENST00000376400 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
CFTRP3-201ENST00000376400 SLC4A2P04920 1241 aa20.31■□□□□ 0.84
CFTRP3-201ENST00000376400 RNF39Q9H2S5 420 aa20.3■□□□□ 0.84
CFTRP3-201ENST00000376400 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
CFTRP3-201ENST00000376400 U3KPZ7 1027 aaPredicted RBP20.09■□□□□ 0.81
CFTRP3-201ENST00000376400 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
CFTRP3-201ENST00000376400 C1QBPQ07021 282 aaKnown RBP20.08■□□□□ 0.81
CFTRP3-201ENST00000376400 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
CFTRP3-201ENST00000376400 FOXD4L1Q9NU39 408 aa20.04■□□□□ 0.8
CFTRP3-201ENST00000376400 CACNB1Q02641 598 aaPredicted RBP19.97■□□□□ 0.79
CFTRP3-201ENST00000376400 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
CFTRP3-201ENST00000376400 ZBTB22O15209 634 aa19.91■□□□□ 0.78
CFTRP3-201ENST00000376400 MYCNP04198 464 aaPredicted RBP19.87■□□□□ 0.77
CFTRP3-201ENST00000376400 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
CFTRP3-201ENST00000376400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
CFTRP3-201ENST00000376400 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
CFTRP3-201ENST00000376400 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
CFTRP3-201ENST00000376400 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
CFTRP3-201ENST00000376400 SAMD1Q6SPF0 538 aaPredicted RBP19.73■□□□□ 0.75
CFTRP3-201ENST00000376400 APLP2Q06481 763 aa19.69■□□□□ 0.74
CFTRP3-201ENST00000376400 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
CFTRP3-201ENST00000376400 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
CFTRP3-201ENST00000376400 CAPN15O75808 1086 aa19.57■□□□□ 0.72
CFTRP3-201ENST00000376400 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
CFTRP3-201ENST00000376400 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
CFTRP3-201ENST00000376400 ATXN8OSP0DMR3 200 aa19.36■□□□□ 0.69
CFTRP3-201ENST00000376400 ATF5Q9Y2D1 282 aaPredicted RBP19.31■□□□□ 0.68
CFTRP3-201ENST00000376400 DSG3P32926 999 aa19.25■□□□□ 0.67
CFTRP3-201ENST00000376400 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
CFTRP3-201ENST00000376400 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
CFTRP3-201ENST00000376400 ABCB7O75027 752 aa19.14■□□□□ 0.65
CFTRP3-201ENST00000376400 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
CFTRP3-201ENST00000376400 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
CFTRP3-201ENST00000376400 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
CFTRP3-201ENST00000376400 POLA2Q14181 598 aa19.05■□□□□ 0.64
CFTRP3-201ENST00000376400 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
CFTRP3-201ENST00000376400 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
CFTRP3-201ENST00000376400 CUX2O14529 1486 aa18.97■□□□□ 0.63
CFTRP3-201ENST00000376400 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
CFTRP3-201ENST00000376400 ERCC6Q03468 1493 aa18.96■□□□□ 0.63
CFTRP3-201ENST00000376400 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
CFTRP3-201ENST00000376400 NESP48681 1621 aa18.92■□□□□ 0.62
CFTRP3-201ENST00000376400 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.62
CFTRP3-201ENST00000376400 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
CFTRP3-201ENST00000376400 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.6
CFTRP3-201ENST00000376400 ZBTB12Q9Y330 459 aaPredicted RBP18.74■□□□□ 0.59
CFTRP3-201ENST00000376400 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
CFTRP3-201ENST00000376400 WIZO95785 1651 aa18.69■□□□□ 0.58
CFTRP3-201ENST00000376400 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
CFTRP3-201ENST00000376400 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
CFTRP3-201ENST00000376400 FBLN2P98095 1184 aa18.59■□□□□ 0.57
CFTRP3-201ENST00000376400 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
CFTRP3-201ENST00000376400 WDR62O43379 1518 aa18.49■□□□□ 0.55
CFTRP3-201ENST00000376400 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
CFTRP3-201ENST00000376400 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
CFTRP3-201ENST00000376400 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
CFTRP3-201ENST00000376400 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
CFTRP3-201ENST00000376400 CFTRP13569 1480 aa18.4■□□□□ 0.54
CFTRP3-201ENST00000376400 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
CFTRP3-201ENST00000376400 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
CFTRP3-201ENST00000376400 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
CFTRP3-201ENST00000376400 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
CFTRP3-201ENST00000376400 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
CFTRP3-201ENST00000376400 SPDYE2BA6NHP3 402 aa18.2■□□□□ 0.5
CFTRP3-201ENST00000376400 SPDYE6P0CI01 402 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms