RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 THOC2Q8NI27 1593 aaKnown RBP14.93□□□□□ -0.02
CXCL12-203ENST00000374429 CARD11Q9BXL7 1154 aa14.92□□□□□ -0.02
CXCL12-203ENST00000374429 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
CXCL12-203ENST00000374429 WASHC2AQ641Q2 1341 aa14.91□□□□□ -0.02
CXCL12-203ENST00000374429 EFCAB5A4FU69 1503 aa14.9□□□□□ -0.02
CXCL12-203ENST00000374429 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
CXCL12-203ENST00000374429 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
CXCL12-203ENST00000374429 PTPRGP23470 1445 aa14.89□□□□□ -0.03
CXCL12-203ENST00000374429 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
CXCL12-203ENST00000374429 UACAQ9BZF9 1416 aa14.89□□□□□ -0.03
CXCL12-203ENST00000374429 IFT140Q96RY7 1462 aa14.88□□□□□ -0.03
CXCL12-203ENST00000374429 CUL7Q14999 1698 aa14.88□□□□□ -0.03
CXCL12-203ENST00000374429 HFM1A2PYH4 1435 aa14.87□□□□□ -0.03
CXCL12-203ENST00000374429 GRIN2AQ12879 1464 aa14.86□□□□□ -0.03
CXCL12-203ENST00000374429 AFAP1Q8N556 730 aa14.86□□□□□ -0.03
CXCL12-203ENST00000374429 NUTM2DQ5VT03 806 aaPredicted RBP14.85□□□□□ -0.03
CXCL12-203ENST00000374429 ST20-MTHFSA0A0A6YYL1 179 aa14.83□□□□□ -0.04
CXCL12-203ENST00000374429 KIAA0586Q9BVV6 1533 aa14.82□□□□□ -0.04
CXCL12-203ENST00000374429 ABCA5Q8WWZ7 1642 aa14.82□□□□□ -0.04
CXCL12-203ENST00000374429 CC2D1BQ5T0F9 858 aaKnown RBP14.82□□□□□ -0.04
CXCL12-203ENST00000374429 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
CXCL12-203ENST00000374429 CTTNBP2Q8WZ74 1663 aa14.82□□□□□ -0.04
CXCL12-203ENST00000374429 ARHGEF11O15085 1522 aa14.81□□□□□ -0.04
CXCL12-203ENST00000374429 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
CXCL12-203ENST00000374429 ABCC5O15440 1437 aa14.8□□□□□ -0.04
CXCL12-203ENST00000374429 NUP153P49790 1475 aaKnown RBP14.8□□□□□ -0.04
CXCL12-203ENST00000374429 TMC1Q8TDI8 760 aa14.8□□□□□ -0.04
CXCL12-203ENST00000374429 TIMELESSQ9UNS1 1208 aa14.8□□□□□ -0.04
CXCL12-203ENST00000374429 NBPF1Q3BBV0 1214 aa14.79□□□□□ -0.04
CXCL12-203ENST00000374429 DAPK1P53355 1430 aa14.78□□□□□ -0.04
CXCL12-203ENST00000374429 ANKRD30AQ9BXX3 1397 aa14.78□□□□□ -0.04
CXCL12-203ENST00000374429 MAP3K1Q13233 1512 aa14.78□□□□□ -0.04
CXCL12-203ENST00000374429 KDM6BO15054 1643 aa14.77□□□□□ -0.04
CXCL12-203ENST00000374429 SUPT6HQ7KZ85 1726 aaKnown RBP14.77□□□□□ -0.04
CXCL12-203ENST00000374429 EHBP1L1Q8N3D4 1523 aa14.77□□□□□ -0.05
CXCL12-203ENST00000374429 DISP1Q96F81 1524 aa14.77□□□□□ -0.05
CXCL12-203ENST00000374429 GGT6Q6P531 493 aa14.77□□□□□ -0.05
CXCL12-203ENST00000374429 KIF7Q2M1P5 1343 aa14.76□□□□□ -0.05
CXCL12-203ENST00000374429 NPM1P06748 294 aaKnown RBP eCLIP14.74□□□□□ -0.05
CXCL12-203ENST00000374429 KIF3BO15066 747 aa14.74□□□□□ -0.05
CXCL12-203ENST00000374429 KIF15Q9NS87 1388 aa14.74□□□□□ -0.05
CXCL12-203ENST00000374429 EIF4G3O43432 1585 aaKnown RBP14.74□□□□□ -0.05
CXCL12-203ENST00000374429 ADAMTS12P58397 1594 aa14.74□□□□□ -0.05
CXCL12-203ENST00000374429 TROQ12816 1431 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-203ENST00000374429 ANKRD50Q9ULJ7 1429 aa14.73□□□□□ -0.05
CXCL12-203ENST00000374429 TNNT2P45379 298 aaPredicted RBP14.73□□□□□ -0.05
CXCL12-203ENST00000374429 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
CXCL12-203ENST00000374429 B4GALNT3Q6L9W6 998 aa14.73□□□□□ -0.05
CXCL12-203ENST00000374429 SYNJ2O15056 1496 aa14.73□□□□□ -0.05
CXCL12-203ENST00000374429 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
CXCL12-203ENST00000374429 CFAP43Q8NDM7 1665 aa14.72□□□□□ -0.05
CXCL12-203ENST00000374429 HECW1Q76N89 1606 aa14.72□□□□□ -0.05
CXCL12-203ENST00000374429 UGGT2Q9NYU1 1516 aa14.72□□□□□ -0.05
CXCL12-203ENST00000374429 PBRM1Q86U86 1689 aa14.7□□□□□ -0.06
CXCL12-203ENST00000374429 CYB5RLQ6IPT4 315 aa14.69□□□□□ -0.06
CXCL12-203ENST00000374429 SAMD9Q5K651 1589 aa14.68□□□□□ -0.06
CXCL12-203ENST00000374429 ANKRD30BQ9BXX2 1392 aa14.68□□□□□ -0.06
CXCL12-203ENST00000374429 USP47Q96K76 1375 aa14.68□□□□□ -0.06
CXCL12-203ENST00000374429 EFCAB2Q5VUJ9 269 aa14.68□□□□□ -0.06
CXCL12-203ENST00000374429 ATP10BO94823 1461 aa14.68□□□□□ -0.06
CXCL12-203ENST00000374429 CAMSAP2Q08AD1 1489 aa14.68□□□□□ -0.06
CXCL12-203ENST00000374429 GPATCH8Q9UKJ3 1502 aaKnown RBP14.68□□□□□ -0.06
CXCL12-203ENST00000374429 ROCK2O75116 1388 aaKnown RBP14.67□□□□□ -0.06
CXCL12-203ENST00000374429 LRRIQ1Q96JM4 1722 aa14.67□□□□□ -0.06
CXCL12-203ENST00000374429 MLECQ14165 292 aa14.67□□□□□ -0.06
CXCL12-203ENST00000374429 NCOA1Q15788 1441 aa14.67□□□□□ -0.06
CXCL12-203ENST00000374429 CCER2I3L3R5 266 aa14.67□□□□□ -0.06
CXCL12-203ENST00000374429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.66□□□□□ -0.06
CXCL12-203ENST00000374429 WDR62O43379 1518 aa14.66□□□□□ -0.06
CXCL12-203ENST00000374429 MIA2Q96PC5 1412 aa14.65□□□□□ -0.06
CXCL12-203ENST00000374429 CCDC7Q96M83 1385 aa14.65□□□□□ -0.06
CXCL12-203ENST00000374429 CEP170Q5SW79 1584 aa14.65□□□□□ -0.06
CXCL12-203ENST00000374429 C9orf84Q5VXU9 1444 aa14.65□□□□□ -0.06
CXCL12-203ENST00000374429 SPAG9O60271 1321 aaKnown RBP14.65□□□□□ -0.06
CXCL12-203ENST00000374429 KIAA0556O60303 1618 aa14.64□□□□□ -0.07
CXCL12-203ENST00000374429 TSHZ2Q9NRE2 1034 aa14.63□□□□□ -0.07
CXCL12-203ENST00000374429 KIF14Q15058 1648 aa14.63□□□□□ -0.07
CXCL12-203ENST00000374429 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
CXCL12-203ENST00000374429 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
CXCL12-203ENST00000374429 RAPGEF6Q8TEU7 1601 aa14.6□□□□□ -0.07
CXCL12-203ENST00000374429 NEUROD2Q15784 382 aa14.6□□□□□ -0.07
CXCL12-203ENST00000374429 ARHGAP5Q13017 1502 aa14.59□□□□□ -0.07
CXCL12-203ENST00000374429 DENND4BO75064 1496 aaPredicted RBP14.59□□□□□ -0.07
CXCL12-203ENST00000374429 RAPGEF3O95398 923 aa14.59□□□□□ -0.07
CXCL12-203ENST00000374429 STK26Q9P289 416 aa14.59□□□□□ -0.07
CXCL12-203ENST00000374429 AKNAQ7Z591 1439 aa14.58□□□□□ -0.08
CXCL12-203ENST00000374429 PANK3Q9H999 370 aa14.58□□□□□ -0.08
CXCL12-203ENST00000374429 CCDC144AA2RUR9 1427 aa14.56□□□□□ -0.08
CXCL12-203ENST00000374429 TMEM132EQ6IEE7 984 aa14.55□□□□□ -0.08
CXCL12-203ENST00000374429 ERCC6L2Q5T890 1561 aa14.55□□□□□ -0.08
CXCL12-203ENST00000374429 SLC24A1O60721 1099 aa14.55□□□□□ -0.08
CXCL12-203ENST00000374429 TRAK1Q9UPV9 953 aa14.55□□□□□ -0.08
CXCL12-203ENST00000374429 KIAA1107Q9UPP5 1409 aa14.55□□□□□ -0.08
CXCL12-203ENST00000374429 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
CXCL12-203ENST00000374429 PLIN1O60240 522 aa14.53□□□□□ -0.08
CXCL12-203ENST00000374429 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
CXCL12-203ENST00000374429 PLEKHH2Q8IVE3 1493 aa14.53□□□□□ -0.08
CXCL12-203ENST00000374429 CCDC146Q8IYE0 955 aa14.53□□□□□ -0.08
CXCL12-203ENST00000374429 SCAPERQ9BY12 1400 aa14.53□□□□□ -0.08
CXCL12-203ENST00000374429 CFAP70Q5T0N1 1121 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms