RNA–Protein interactions for RNA: ENST00000373950.6

EPB41L1-206, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 5 BASIC

Gene EPB41L1, Length 3,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-206ENST00000373950 FBLN2P98095 1184 aa16.75■□□□□ 0.27
EPB41L1-206ENST00000373950 HFM1A2PYH4 1435 aa16.75■□□□□ 0.27
EPB41L1-206ENST00000373950 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
EPB41L1-206ENST00000373950 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.275e-7■■□□□ 12.1
EPB41L1-206ENST00000373950 CFDP1Q9UEE9 299 aaPredicted RBP16.74■□□□□ 0.27
EPB41L1-206ENST00000373950 NAIPQ13075 1403 aa16.73■□□□□ 0.27
EPB41L1-206ENST00000373950 ST20-MTHFSA0A0A6YYL1 179 aa16.72■□□□□ 0.27
EPB41L1-206ENST00000373950 TDRD9Q8NDG6 1382 aaKnown RBP16.72■□□□□ 0.27
EPB41L1-206ENST00000373950 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
EPB41L1-206ENST00000373950 NFKBIBQ15653 356 aa16.71■□□□□ 0.27
EPB41L1-206ENST00000373950 CDCA7LQ96GN5 454 aa16.71■□□□□ 0.27
EPB41L1-206ENST00000373950 USP47Q96K76 1375 aa16.71■□□□□ 0.27
EPB41L1-206ENST00000373950 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
EPB41L1-206ENST00000373950 SMG6Q86US8 1419 aaKnown RBP16.7■□□□□ 0.26
EPB41L1-206ENST00000373950 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
EPB41L1-206ENST00000373950 PNISRQ8TF01 805 aaKnown RBP16.7■□□□□ 0.26
EPB41L1-206ENST00000373950 BACH2Q9BYV9 841 aa16.7■□□□□ 0.26
EPB41L1-206ENST00000373950 CASKIN1Q8WXD9 1431 aa16.69■□□□□ 0.26
EPB41L1-206ENST00000373950 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
EPB41L1-206ENST00000373950 SLKQ9H2G2 1235 aaPredicted RBP16.68■□□□□ 0.26
EPB41L1-206ENST00000373950 UPF2Q9HAU5 1272 aaKnown RBP16.68■□□□□ 0.26
EPB41L1-206ENST00000373950 NCOA2Q15596 1464 aa16.68■□□□□ 0.26
EPB41L1-206ENST00000373950 TSPY4P0CV99 314 aa16.68■□□□□ 0.26
EPB41L1-206ENST00000373950 TSPY10P0CW01 314 aa16.68■□□□□ 0.26
EPB41L1-206ENST00000373950 RALBP1Q15311 655 aa16.68■□□□□ 0.26
EPB41L1-206ENST00000373950 FRAT1Q92837 279 aaPredicted RBP16.67■□□□□ 0.26
EPB41L1-206ENST00000373950 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.261e-8■■□□□ 13.5
EPB41L1-206ENST00000373950 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
EPB41L1-206ENST00000373950 MS4A1P11836 297 aa16.66■□□□□ 0.26
EPB41L1-206ENST00000373950 CFTRP13569 1480 aa16.66■□□□□ 0.26
EPB41L1-206ENST00000373950 PCF11O94913 1555 aaKnown RBP16.66■□□□□ 0.26
EPB41L1-206ENST00000373950 NLRP13Q86W25 1043 aa16.66■□□□□ 0.26
EPB41L1-206ENST00000373950 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
EPB41L1-206ENST00000373950 CADPSQ9ULU8 1353 aa16.65■□□□□ 0.26
EPB41L1-206ENST00000373950 SPRYD3Q8NCJ5 442 aa16.64■□□□□ 0.25
EPB41L1-206ENST00000373950 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
EPB41L1-206ENST00000373950 BECN1Q14457 450 aa16.63■□□□□ 0.25
EPB41L1-206ENST00000373950 MAP3K1Q13233 1512 aa16.63■□□□□ 0.25
EPB41L1-206ENST00000373950 FYCO1Q9BQS8 1478 aa16.63■□□□□ 0.25
EPB41L1-206ENST00000373950 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
EPB41L1-206ENST00000373950 NAP1L5Q96NT1 182 aaPredicted RBP16.63■□□□□ 0.25
EPB41L1-206ENST00000373950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.63■□□□□ 0.256e-7■■□□□ 13.4
EPB41L1-206ENST00000373950 GLIPR1L2Q4G1C9 344 aa16.63■□□□□ 0.25
EPB41L1-206ENST00000373950 KIF15Q9NS87 1388 aa16.62■□□□□ 0.25
EPB41L1-206ENST00000373950 PDE3BQ13370 1112 aa16.62■□□□□ 0.25
EPB41L1-206ENST00000373950 NCOA1Q15788 1441 aa16.61■□□□□ 0.25
EPB41L1-206ENST00000373950 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
EPB41L1-206ENST00000373950 FRAT2O75474 233 aaPredicted RBP16.6■□□□□ 0.25
EPB41L1-206ENST00000373950 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
EPB41L1-206ENST00000373950 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
EPB41L1-206ENST00000373950 GZF1Q9H116 711 aaPredicted RBP16.59■□□□□ 0.25
EPB41L1-206ENST00000373950 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
EPB41L1-206ENST00000373950 KNSTRNQ9Y448 316 aa16.59■□□□□ 0.25
EPB41L1-206ENST00000373950 PEG3Q9GZU2 1588 aa16.59■□□□□ 0.25
EPB41L1-206ENST00000373950 FAM161AQ3B820 660 aa16.57■□□□□ 0.24
EPB41L1-206ENST00000373950 ROCK2O75116 1388 aaKnown RBP16.56■□□□□ 0.24
EPB41L1-206ENST00000373950 NUP155O75694 1391 aa16.56■□□□□ 0.24
EPB41L1-206ENST00000373950 PTPN23Q9H3S7 1636 aa16.54■□□□□ 0.24
EPB41L1-206ENST00000373950 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
EPB41L1-206ENST00000373950 HSP90AA1P07900 732 aaKnown RBP16.53■□□□□ 0.24
EPB41L1-206ENST00000373950 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.24
EPB41L1-206ENST00000373950 CCDC146Q8IYE0 955 aa16.52■□□□□ 0.24
EPB41L1-206ENST00000373950 NCAPD3P42695 1498 aa16.52■□□□□ 0.23
EPB41L1-206ENST00000373950 PANK3Q9H999 370 aa16.52■□□□□ 0.23
EPB41L1-206ENST00000373950 C20orf194Q5TEA3 1177 aa16.5■□□□□ 0.23
EPB41L1-206ENST00000373950 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
EPB41L1-206ENST00000373950 BRD4O60885 1362 aaPredicted RBP16.49■□□□□ 0.23
EPB41L1-206ENST00000373950 TMF1P82094 1093 aa16.49■□□□□ 0.23
EPB41L1-206ENST00000373950 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
EPB41L1-206ENST00000373950 ANKRD30BQ9BXX2 1392 aa16.48■□□□□ 0.23
EPB41L1-206ENST00000373950 PLEKHD1A6NEE1 506 aa16.47■□□□□ 0.23
EPB41L1-206ENST00000373950 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
EPB41L1-206ENST00000373950 TNNT2P45379 298 aaPredicted RBP16.46■□□□□ 0.23
EPB41L1-206ENST00000373950 L1TD1Q5T7N2 865 aaKnown RBP16.46■□□□□ 0.23
EPB41L1-206ENST00000373950 TRIM44Q96DX7 344 aaPredicted RBP16.46■□□□□ 0.23
EPB41L1-206ENST00000373950 PNNQ9H307 717 aaKnown RBP16.46■□□□□ 0.23
EPB41L1-206ENST00000373950 ADAMTS8Q9UP79 889 aa16.45■□□□□ 0.22
EPB41L1-206ENST00000373950 EFCAB5A4FU69 1503 aa16.42■□□□□ 0.22
EPB41L1-206ENST00000373950 RNF123Q5XPI4 1314 aa16.42■□□□□ 0.22
EPB41L1-206ENST00000373950 ANKRD30AQ9BXX3 1397 aa16.41■□□□□ 0.22
EPB41L1-206ENST00000373950 CLUAP1Q96AJ1 413 aa16.41■□□□□ 0.22
EPB41L1-206ENST00000373950 ANP32BQ92688 251 aaKnown RBP16.4■□□□□ 0.22
EPB41L1-206ENST00000373950 COG6Q9Y2V7 657 aa16.4■□□□□ 0.22
EPB41L1-206ENST00000373950 GOLGA6L3A6NEY3 463 aa16.4■□□□□ 0.22
EPB41L1-206ENST00000373950 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
EPB41L1-206ENST00000373950 POGKQ9P215 609 aa16.39■□□□□ 0.21
EPB41L1-206ENST00000373950 RPRD2Q5VT52 1461 aaKnown RBP16.39■□□□□ 0.21
EPB41L1-206ENST00000373950 APAF1O14727 1248 aa16.39■□□□□ 0.21
EPB41L1-206ENST00000373950 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.21
EPB41L1-206ENST00000373950 VSIG10Q8N0Z9 540 aa16.39■□□□□ 0.21
EPB41L1-206ENST00000373950 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
EPB41L1-206ENST00000373950 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
EPB41L1-206ENST00000373950 WASHC2CQ9Y4E1 1318 aa16.37■□□□□ 0.21
EPB41L1-206ENST00000373950 SUPT6HQ7KZ85 1726 aaKnown RBP16.37■□□□□ 0.21
EPB41L1-206ENST00000373950 MIA2Q96PC5 1412 aa16.37■□□□□ 0.21
EPB41L1-206ENST00000373950 BCL2L13Q9BXK5 485 aa16.37■□□□□ 0.21
EPB41L1-206ENST00000373950 EHBP1L1Q8N3D4 1523 aa16.36■□□□□ 0.21
EPB41L1-206ENST00000373950 CHGAP10645 457 aaKnown RBP16.36■□□□□ 0.21
EPB41L1-206ENST00000373950 FTSJ3Q8IY81 847 aaKnown RBP16.35■□□□□ 0.21
EPB41L1-206ENST00000373950 FAM43AQ8N2R8 423 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms