RNA–Protein interactions for RNA: ENST00000373950.6

EPB41L1-206, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 5 BASIC

Gene EPB41L1, Length 3,631 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-206ENST00000373950 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
EPB41L1-206ENST00000373950 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
EPB41L1-206ENST00000373950 SHROOM4Q9ULL8 1493 aa21.58■■□□□ 1.04
EPB41L1-206ENST00000373950 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
EPB41L1-206ENST00000373950 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
EPB41L1-206ENST00000373950 HRCP23327 699 aa20.98■□□□□ 0.95
EPB41L1-206ENST00000373950 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
EPB41L1-206ENST00000373950 CHIC1Q5VXU3 224 aa20.56■□□□□ 0.88
EPB41L1-206ENST00000373950 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
EPB41L1-206ENST00000373950 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
EPB41L1-206ENST00000373950 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
EPB41L1-206ENST00000373950 FAM9AQ8IZU1 332 aaPredicted RBP20.22■□□□□ 0.83
EPB41L1-206ENST00000373950 TRIM26Q12899 539 aaPredicted RBP20.2■□□□□ 0.82
EPB41L1-206ENST00000373950 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
EPB41L1-206ENST00000373950 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
EPB41L1-206ENST00000373950 TRIM41Q8WV44 630 aa19.89■□□□□ 0.78
EPB41L1-206ENST00000373950 TTBK1Q5TCY1 1321 aaPredicted RBP19.87■□□□□ 0.77
EPB41L1-206ENST00000373950 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
EPB41L1-206ENST00000373950 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
EPB41L1-206ENST00000373950 CENPBP07199 599 aaPredicted RBP19.74■□□□□ 0.75
EPB41L1-206ENST00000373950 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
EPB41L1-206ENST00000373950 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.63■□□□□ 0.73
EPB41L1-206ENST00000373950 YTHDC1Q96MU7 727 aaKnown RBP19.62■□□□□ 0.73
EPB41L1-206ENST00000373950 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
EPB41L1-206ENST00000373950 ZCCHC6Q5VYS8 1495 aaKnown RBP19.51■□□□□ 0.71
EPB41L1-206ENST00000373950 MYT1Q01538 1121 aa19.48■□□□□ 0.71
EPB41L1-206ENST00000373950 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
EPB41L1-206ENST00000373950 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
EPB41L1-206ENST00000373950 NEUROD1Q13562 356 aa19.43■□□□□ 0.7
EPB41L1-206ENST00000373950 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
EPB41L1-206ENST00000373950 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
EPB41L1-206ENST00000373950 RANGAP1P46060 587 aaPredicted RBP19.12■□□□□ 0.65
EPB41L1-206ENST00000373950 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
EPB41L1-206ENST00000373950 APLP2Q06481 763 aa19.07■□□□□ 0.64
EPB41L1-206ENST00000373950 ZNF316A6NFI3 1004 aaPredicted RBP19■□□□□ 0.63
EPB41L1-206ENST00000373950 MIER1Q8N108 512 aa18.83■□□□□ 0.61
EPB41L1-206ENST00000373950 RSF1Q96T23 1441 aaPredicted RBP18.78■□□□□ 0.6
EPB41L1-206ENST00000373950 BCANQ96GW7 911 aa18.68■□□□□ 0.58
EPB41L1-206ENST00000373950 SCRIBQ14160 1630 aa18.66■□□□□ 0.58
EPB41L1-206ENST00000373950 ITGAEP38570 1179 aa18.62■□□□□ 0.57
EPB41L1-206ENST00000373950 NEFLP07196 543 aa18.57■□□□□ 0.56
EPB41L1-206ENST00000373950 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
EPB41L1-206ENST00000373950 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
EPB41L1-206ENST00000373950 ERICH6Q7L0X2 663 aa18.51■□□□□ 0.55
EPB41L1-206ENST00000373950 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
EPB41L1-206ENST00000373950 ABCC9O60706 1549 aa18.43■□□□□ 0.54
EPB41L1-206ENST00000373950 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
EPB41L1-206ENST00000373950 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
EPB41L1-206ENST00000373950 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
EPB41L1-206ENST00000373950 FKBP8Q14318 412 aa18.34■□□□□ 0.53
EPB41L1-206ENST00000373950 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
EPB41L1-206ENST00000373950 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
EPB41L1-206ENST00000373950 SOGA1O94964 1423 aa18.24■□□□□ 0.51
EPB41L1-206ENST00000373950 TNIKQ9UKE5 1360 aa18.23■□□□□ 0.51
EPB41L1-206ENST00000373950 DDX10Q13206 875 aaKnown RBP18.21■□□□□ 0.5
EPB41L1-206ENST00000373950 TSHZ2Q9NRE2 1034 aa18.2■□□□□ 0.5
EPB41L1-206ENST00000373950 TRIM52Q96A61 297 aa18.18■□□□□ 0.5
EPB41L1-206ENST00000373950 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
EPB41L1-206ENST00000373950 BCL11AQ9H165 835 aa18.17■□□□□ 0.5
EPB41L1-206ENST00000373950 CCDC88BA6NC98 1476 aa18.17■□□□□ 0.5
EPB41L1-206ENST00000373950 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
EPB41L1-206ENST00000373950 CLIP1P30622 1438 aa18.13■□□□□ 0.49
EPB41L1-206ENST00000373950 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
EPB41L1-206ENST00000373950 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
EPB41L1-206ENST00000373950 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
EPB41L1-206ENST00000373950 ANP32CO43423 234 aa18.08■□□□□ 0.49
EPB41L1-206ENST00000373950 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
EPB41L1-206ENST00000373950 GOLGA3Q08378 1498 aa18.07■□□□□ 0.48
EPB41L1-206ENST00000373950 KCNH8Q96L42 1107 aa18.06■□□□□ 0.48
EPB41L1-206ENST00000373950 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
EPB41L1-206ENST00000373950 WIZO95785 1651 aa18.04■□□□□ 0.48
EPB41L1-206ENST00000373950 CDK11AQ9UQ88 783 aaPredicted RBP18.02■□□□□ 0.48
EPB41L1-206ENST00000373950 IRX6P78412 446 aaPredicted RBP18.01■□□□□ 0.47
EPB41L1-206ENST00000373950 RUSC2Q8N2Y8 1516 aa18■□□□□ 0.47
EPB41L1-206ENST00000373950 EEA1Q15075 1411 aa17.98■□□□□ 0.47
EPB41L1-206ENST00000373950 RBM19Q9Y4C8 960 aaKnown RBP17.96■□□□□ 0.47
EPB41L1-206ENST00000373950 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.466e-7■■■■□ 21.7
EPB41L1-206ENST00000373950 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
EPB41L1-206ENST00000373950 SIN3AQ96ST3 1273 aa17.87■□□□□ 0.45
EPB41L1-206ENST00000373950 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
EPB41L1-206ENST00000373950 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
EPB41L1-206ENST00000373950 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
EPB41L1-206ENST00000373950 POLR3GLQ9BT43 218 aa17.85■□□□□ 0.45
EPB41L1-206ENST00000373950 DHX57Q6P158 1386 aaKnown RBP17.82■□□□□ 0.44
EPB41L1-206ENST00000373950 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
EPB41L1-206ENST00000373950 NBR1Q14596 966 aa17.79■□□□□ 0.44
EPB41L1-206ENST00000373950 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
EPB41L1-206ENST00000373950 FAM9BQ8IZU0 186 aa17.72■□□□□ 0.43
EPB41L1-206ENST00000373950 NACADO15069 1562 aa17.71■□□□□ 0.43
EPB41L1-206ENST00000373950 TONSLQ96HA7 1378 aa17.7■□□□□ 0.42
EPB41L1-206ENST00000373950 CCNB3Q8WWL7 1395 aa17.68■□□□□ 0.42
EPB41L1-206ENST00000373950 RAPGEF2Q9Y4G8 1499 aa17.66■□□□□ 0.42
EPB41L1-206ENST00000373950 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
EPB41L1-206ENST00000373950 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
EPB41L1-206ENST00000373950 SENP3-EIF4A1A0A087X0R7 540 aa17.61■□□□□ 0.41
EPB41L1-206ENST00000373950 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
EPB41L1-206ENST00000373950 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.41
EPB41L1-206ENST00000373950 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
EPB41L1-206ENST00000373950 CCER2I3L3R5 266 aa17.56■□□□□ 0.4
EPB41L1-206ENST00000373950 DEKP35659 375 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms