RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
SMARCA1-203ENST00000371123 SLC4A1APQ9BWU0 796 aaKnown RBP11.86□□□□□ -0.51
SMARCA1-203ENST00000371123 GAPVD1Q14C86 1478 aa11.86□□□□□ -0.51
SMARCA1-203ENST00000371123 PKNOX2Q96KN3 472 aa11.85□□□□□ -0.51
SMARCA1-203ENST00000371123 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
SMARCA1-203ENST00000371123 HSPA5P11021 654 aaKnown RBP11.84□□□□□ -0.51
SMARCA1-203ENST00000371123 PRKRIP1Q9H875 184 aaPredicted RBP11.84□□□□□ -0.51
SMARCA1-203ENST00000371123 FHAD1B1AJZ9 1412 aa11.84□□□□□ -0.51
SMARCA1-203ENST00000371123 FOXD1Q16676 465 aa11.84□□□□□ -0.51
SMARCA1-203ENST00000371123 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
SMARCA1-203ENST00000371123 FRAT1Q92837 279 aaPredicted RBP11.83□□□□□ -0.52
SMARCA1-203ENST00000371123 SMG6Q86US8 1419 aaKnown RBP11.83□□□□□ -0.52
SMARCA1-203ENST00000371123 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
SMARCA1-203ENST00000371123 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
SMARCA1-203ENST00000371123 SYNJ2O15056 1496 aa11.82□□□□□ -0.52
SMARCA1-203ENST00000371123 NUP160Q12769 1436 aa11.81□□□□□ -0.52
SMARCA1-203ENST00000371123 CFAP43Q8NDM7 1665 aa11.8□□□□□ -0.52
SMARCA1-203ENST00000371123 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
SMARCA1-203ENST00000371123 KDM2AQ9Y2K7 1162 aa11.8□□□□□ -0.52
SMARCA1-203ENST00000371123 CTTNBP2Q8WZ74 1663 aa11.79□□□□□ -0.52
SMARCA1-203ENST00000371123 KIF27Q86VH2 1401 aa11.79□□□□□ -0.52
SMARCA1-203ENST00000371123 ARXQ96QS3 562 aa11.79□□□□□ -0.52
SMARCA1-203ENST00000371123 SNAPC4Q5SXM2 1469 aa11.78□□□□□ -0.52
SMARCA1-203ENST00000371123 MAP3K1Q13233 1512 aa11.78□□□□□ -0.52
SMARCA1-203ENST00000371123 GSE1Q14687 1217 aa11.78□□□□□ -0.52
SMARCA1-203ENST00000371123 CEP170Q5SW79 1584 aa11.77□□□□□ -0.52
SMARCA1-203ENST00000371123 BACH2Q9BYV9 841 aa11.77□□□□□ -0.52
SMARCA1-203ENST00000371123 IGF1RP08069 1367 aa11.77□□□□□ -0.53
SMARCA1-203ENST00000371123 NCOA1Q15788 1441 aa11.77□□□□□ -0.53
SMARCA1-203ENST00000371123 PDE4AP27815 886 aa11.77□□□□□ -0.53
SMARCA1-203ENST00000371123 KDM6BO15054 1643 aa11.77□□□□□ -0.53
SMARCA1-203ENST00000371123 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
SMARCA1-203ENST00000371123 PCF11O94913 1555 aaKnown RBP11.77□□□□□ -0.53
SMARCA1-203ENST00000371123 NFKBIBQ15653 356 aa11.76□□□□□ -0.53
SMARCA1-203ENST00000371123 TONSLQ96HA7 1378 aa11.76□□□□□ -0.53
SMARCA1-203ENST00000371123 PTPN23Q9H3S7 1636 aa11.76□□□□□ -0.53
SMARCA1-203ENST00000371123 MRS2Q9HD23 443 aa11.76□□□□□ -0.53
SMARCA1-203ENST00000371123 RRAGDQ9NQL2 400 aaPredicted RBP11.76□□□□□ -0.53
SMARCA1-203ENST00000371123 GRIN2AQ12879 1464 aa11.75□□□□□ -0.53
SMARCA1-203ENST00000371123 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
SMARCA1-203ENST00000371123 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
SMARCA1-203ENST00000371123 EXOC6Q8TAG9 804 aa11.74□□□□□ -0.53
SMARCA1-203ENST00000371123 CCDC7Q96M83 1385 aa11.74□□□□□ -0.53
SMARCA1-203ENST00000371123 DHX29Q7Z478 1369 aaKnown RBP11.73□□□□□ -0.53
SMARCA1-203ENST00000371123 ZMYND15Q9H091 742 aa11.73□□□□□ -0.53
SMARCA1-203ENST00000371123 NUDCQ9Y266 331 aa11.73□□□□□ -0.53
SMARCA1-203ENST00000371123 POLR1AO95602 1720 aaPredicted RBP11.73□□□□□ -0.53
SMARCA1-203ENST00000371123 LRRIQ1Q96JM4 1722 aa11.72□□□□□ -0.53
SMARCA1-203ENST00000371123 BCORL1Q5H9F3 1711 aa11.72□□□□□ -0.53
SMARCA1-203ENST00000371123 UACAQ9BZF9 1416 aa11.71□□□□□ -0.53
SMARCA1-203ENST00000371123 SPATA31E1Q6ZUB1 1445 aa11.7□□□□□ -0.54
SMARCA1-203ENST00000371123 NAIPQ13075 1403 aa11.7□□□□□ -0.54
SMARCA1-203ENST00000371123 NBPF8Q3BBV2 869 aa11.7□□□□□ -0.54
SMARCA1-203ENST00000371123 DAXXQ9UER7 740 aaPredicted RBP11.69□□□□□ -0.54
SMARCA1-203ENST00000371123 SAMD9Q5K651 1589 aa11.69□□□□□ -0.54
SMARCA1-203ENST00000371123 KIF7Q2M1P5 1343 aa11.69□□□□□ -0.54
SMARCA1-203ENST00000371123 TDRD9Q8NDG6 1382 aaKnown RBP11.69□□□□□ -0.54
SMARCA1-203ENST00000371123 FRAT2O75474 233 aaPredicted RBP11.68□□□□□ -0.54
SMARCA1-203ENST00000371123 UGGT2Q9NYU1 1516 aa11.68□□□□□ -0.54
SMARCA1-203ENST00000371123 HFM1A2PYH4 1435 aa11.68□□□□□ -0.54
SMARCA1-203ENST00000371123 FAM43AQ8N2R8 423 aa11.66□□□□□ -0.54
SMARCA1-203ENST00000371123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.541e-9■■□□□ 11.5
SMARCA1-203ENST00000371123 RGL3Q3MIN7 710 aa11.64□□□□□ -0.55
SMARCA1-203ENST00000371123 RSPH6AQ9H0K4 717 aa11.64□□□□□ -0.55
SMARCA1-203ENST00000371123 KIAA0586Q9BVV6 1533 aa11.64□□□□□ -0.55
SMARCA1-203ENST00000371123 FGD6Q6ZV73 1430 aa11.63□□□□□ -0.55
SMARCA1-203ENST00000371123 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
SMARCA1-203ENST00000371123 RRP1P56182 461 aaKnown RBP11.62□□□□□ -0.55
SMARCA1-203ENST00000371123 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
SMARCA1-203ENST00000371123 PNISRQ8TF01 805 aaKnown RBP11.62□□□□□ -0.55
SMARCA1-203ENST00000371123 L3MBTL2Q969R5 705 aa11.62□□□□□ -0.55
SMARCA1-203ENST00000371123 PPM1GO15355 546 aaPredicted RBP11.62□□□□□ -0.55
SMARCA1-203ENST00000371123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.62□□□□□ -0.554e-6■□□□□ 8.3
SMARCA1-203ENST00000371123 IQGAP2Q13576 1575 aa11.62□□□□□ -0.55
SMARCA1-203ENST00000371123 POGKQ9P215 609 aa11.61□□□□□ -0.55
SMARCA1-203ENST00000371123 EIF4G2P78344 907 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMARCA1-203ENST00000371123 PLIN1O60240 522 aa11.6□□□□□ -0.55
SMARCA1-203ENST00000371123 TEX14Q8IWB6 1497 aa11.59□□□□□ -0.55
SMARCA1-203ENST00000371123 CARMIL1Q5VZK9 1371 aa11.59□□□□□ -0.55
SMARCA1-203ENST00000371123 HECW1Q76N89 1606 aa11.59□□□□□ -0.55
SMARCA1-203ENST00000371123 MYOM3Q5VTT5 1437 aa11.59□□□□□ -0.55
SMARCA1-203ENST00000371123 TMC1Q8TDI8 760 aa11.59□□□□□ -0.55
SMARCA1-203ENST00000371123 FHOD3Q2V2M9 1422 aa11.58□□□□□ -0.56
SMARCA1-203ENST00000371123 LRPPRCP42704 1394 aaKnown RBP11.58□□□□□ -0.56
SMARCA1-203ENST00000371123 C8orf34Q49A92 452 aa11.58□□□□□ -0.56
SMARCA1-203ENST00000371123 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
SMARCA1-203ENST00000371123 RIMBP3CA6NJZ7 1639 aa11.57□□□□□ -0.56
SMARCA1-203ENST00000371123 RIMBP3BA6NNM3 1639 aa11.57□□□□□ -0.56
SMARCA1-203ENST00000371123 RIMBP3Q9UFD9 1639 aa11.57□□□□□ -0.56
SMARCA1-203ENST00000371123 KIAA0556O60303 1618 aa11.57□□□□□ -0.56
SMARCA1-203ENST00000371123 EFCAB5A4FU69 1503 aa11.57□□□□□ -0.56
SMARCA1-203ENST00000371123 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
SMARCA1-203ENST00000371123 DISP1Q96F81 1524 aa11.56□□□□□ -0.56
SMARCA1-203ENST00000371123 MS4A1P11836 297 aa11.56□□□□□ -0.56
SMARCA1-203ENST00000371123 MTUS2Q5JR59 1369 aa11.56□□□□□ -0.56
SMARCA1-203ENST00000371123 USP19O94966 1318 aa11.55□□□□□ -0.56
SMARCA1-203ENST00000371123 KDM2BQ8NHM5 1336 aa11.55□□□□□ -0.56
SMARCA1-203ENST00000371123 GCC2Q8IWJ2 1684 aa11.54□□□□□ -0.56
SMARCA1-203ENST00000371123 MAGI3Q5TCQ9 1506 aa11.53□□□□□ -0.56
SMARCA1-203ENST00000371123 PANK2Q9BZ23 570 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms