RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
DEPDC1-201ENST00000370966 MORC1Q86VD1 984 aa15.31■□□□□ 0.04
DEPDC1-201ENST00000370966 ARXQ96QS3 562 aa15.3■□□□□ 0.04
DEPDC1-201ENST00000370966 CASC1Q6TDU7 716 aa15.3■□□□□ 0.04
DEPDC1-201ENST00000370966 JPH4Q96JJ6 628 aa15.29■□□□□ 0.04
DEPDC1-201ENST00000370966 LAS1LQ9Y4W2 734 aaKnown RBP15.29■□□□□ 0.04
DEPDC1-201ENST00000370966 IGF1RP08069 1367 aa15.28■□□□□ 0.04
DEPDC1-201ENST00000370966 ZBTB7CA1YPR0 619 aa15.28■□□□□ 0.04
DEPDC1-201ENST00000370966 NCLP19338 710 aaKnown RBP15.27■□□□□ 0.04
DEPDC1-201ENST00000370966 GGT6Q6P531 493 aa15.27■□□□□ 0.04
DEPDC1-201ENST00000370966 SRPK2P78362 688 aaKnown RBP15.27■□□□□ 0.03
DEPDC1-201ENST00000370966 RBM19Q9Y4C8 960 aaKnown RBP15.26■□□□□ 0.03
DEPDC1-201ENST00000370966 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
DEPDC1-201ENST00000370966 RCAN3Q9UKA8 241 aa15.25■□□□□ 0.03
DEPDC1-201ENST00000370966 NLRP13Q86W25 1043 aa15.25■□□□□ 0.03
DEPDC1-201ENST00000370966 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
DEPDC1-201ENST00000370966 TRIM44Q96DX7 344 aaPredicted RBP15.23■□□□□ 0.03
DEPDC1-201ENST00000370966 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
DEPDC1-201ENST00000370966 PDE3BQ13370 1112 aa15.22■□□□□ 0.03
DEPDC1-201ENST00000370966 GLIPR1L2Q4G1C9 344 aa15.22■□□□□ 0.03
DEPDC1-201ENST00000370966 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
DEPDC1-201ENST00000370966 SPAG9O60271 1321 aaKnown RBP15.21■□□□□ 0.02
DEPDC1-201ENST00000370966 KIF3BO15066 747 aa15.2■□□□□ 0.02
DEPDC1-201ENST00000370966 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
DEPDC1-201ENST00000370966 HDGFL2Q7Z4V5 671 aaPredicted RBP15.2■□□□□ 0.02
DEPDC1-201ENST00000370966 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
DEPDC1-201ENST00000370966 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
DEPDC1-201ENST00000370966 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
DEPDC1-201ENST00000370966 IPO8O15397 1037 aaKnown RBP15.17■□□□□ 0.02
DEPDC1-201ENST00000370966 SAFB2Q14151 953 aaKnown RBP eCLIP15.17■□□□□ 0.02
DEPDC1-201ENST00000370966 CFAP44Q96MT7 982 aa15.16■□□□□ 0.02
DEPDC1-201ENST00000370966 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
DEPDC1-201ENST00000370966 KIF21BO75037 1637 aa15.15■□□□□ 0.02
DEPDC1-201ENST00000370966 KIF15Q9NS87 1388 aa15.15■□□□□ 0.02
DEPDC1-201ENST00000370966 U2AF1L5P0DN76 240 aaPredicted RBP15.15■□□□□ 0.02
DEPDC1-201ENST00000370966 U2AF1Q01081 240 aaKnown RBP eCLIP15.15■□□□□ 0.02
DEPDC1-201ENST00000370966 CALD1Q05682 793 aaKnown RBP15.15■□□□□ 0.02
DEPDC1-201ENST00000370966 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
DEPDC1-201ENST00000370966 STK26Q9P289 416 aa15.14■□□□□ 0.01
DEPDC1-201ENST00000370966 CCDC144AA2RUR9 1427 aa15.14■□□□□ 0.01
DEPDC1-201ENST00000370966 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
DEPDC1-201ENST00000370966 ST20-MTHFSA0A0A6YYL1 179 aa15.14■□□□□ 0.01
DEPDC1-201ENST00000370966 MLECQ14165 292 aa15.14■□□□□ 0.01
DEPDC1-201ENST00000370966 FGD6Q6ZV73 1430 aa15.13■□□□□ 0.01
DEPDC1-201ENST00000370966 A0A0G2JS52 829 aa15.12■□□□□ 0.01
DEPDC1-201ENST00000370966 MYBBP1AQ9BQG0 1328 aaKnown RBP15.12■□□□□ 0.01
DEPDC1-201ENST00000370966 PTPRGP23470 1445 aa15.12■□□□□ 0.01
DEPDC1-201ENST00000370966 MYOM3Q5VTT5 1437 aa15.12■□□□□ 0.01
DEPDC1-201ENST00000370966 HSP90AB1P08238 724 aaKnown RBP15.12■□□□□ 0.01
DEPDC1-201ENST00000370966 LMOD2Q6P5Q4 547 aa15.12■□□□□ 0.01
DEPDC1-201ENST00000370966 TSHZ2Q9NRE2 1034 aa15.12■□□□□ 0.01
DEPDC1-201ENST00000370966 RWDD1Q9H446 243 aaPredicted RBP15.1■□□□□ 0.01
DEPDC1-201ENST00000370966 ERICH3Q5RHP9 1530 aa15.1■□□□□ 0.01
DEPDC1-201ENST00000370966 HSCBQ8IWL3 235 aa15.1■□□□□ 0.01
DEPDC1-201ENST00000370966 TERF2IPQ9NYB0 399 aa15.1■□□□□ 0.01
DEPDC1-201ENST00000370966 LRRC9Q6ZRR7 1453 aa15.09■□□□□ 0.01
DEPDC1-201ENST00000370966 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
DEPDC1-201ENST00000370966 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0.01
DEPDC1-201ENST00000370966 CUX1P39880 1505 aa15.08■□□□□ 0
DEPDC1-201ENST00000370966 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
DEPDC1-201ENST00000370966 USP47Q96K76 1375 aa15.08■□□□□ 0
DEPDC1-201ENST00000370966 WASHC2CQ9Y4E1 1318 aa15.07■□□□□ 0
DEPDC1-201ENST00000370966 OS9Q13438 667 aaPredicted RBP15.07■□□□□ 0
DEPDC1-201ENST00000370966 ZBED9Q6R2W3 1325 aa15.07■□□□□ 0
DEPDC1-201ENST00000370966 CASKIN1Q8WXD9 1431 aa15.06■□□□□ 0
DEPDC1-201ENST00000370966 PMFBP1Q8TBY8 1022 aa15.06■□□□□ 0
DEPDC1-201ENST00000370966 PTMAP06454 111 aaKnown RBP15.05■□□□□ 0
DEPDC1-201ENST00000370966 ZRSR1Q15695 479 aaKnown RBP15.05■□□□□ 0
DEPDC1-201ENST00000370966 CFTRP13569 1480 aa15.04■□□□□ -0
DEPDC1-201ENST00000370966 CHMP4AQ9BY43 222 aa15.04■□□□□ -0
DEPDC1-201ENST00000370966 PANK3Q9H999 370 aa15.04■□□□□ -0
DEPDC1-201ENST00000370966 SOX12O15370 315 aa15.04■□□□□ -0
DEPDC1-201ENST00000370966 MCCP23508 829 aa15.03■□□□□ -0
DEPDC1-201ENST00000370966 STAC3Q96MF2 364 aa15.03■□□□□ -0
DEPDC1-201ENST00000370966 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
DEPDC1-201ENST00000370966 CENPJQ9HC77 1338 aaPredicted RBP15.02□□□□□ -0.01
DEPDC1-201ENST00000370966 ARAP1Q96P48 1450 aa15.02□□□□□ -0.01
DEPDC1-201ENST00000370966 KCNJ4P48050 445 aa15.01□□□□□ -0.01
DEPDC1-201ENST00000370966 ITPRIPQ8IWB1 547 aa15.01□□□□□ -0.01
DEPDC1-201ENST00000370966 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
DEPDC1-201ENST00000370966 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
DEPDC1-201ENST00000370966 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
DEPDC1-201ENST00000370966 L1TD1Q5T7N2 865 aaKnown RBP15□□□□□ -0.01
DEPDC1-201ENST00000370966 NGEFQ8N5V2 710 aa15□□□□□ -0.01
DEPDC1-201ENST00000370966 IPO9Q96P70 1041 aaKnown RBP15□□□□□ -0.01
DEPDC1-201ENST00000370966 SYNJ1O43426 1573 aa14.99□□□□□ -0.01
DEPDC1-201ENST00000370966 TRAK1Q9UPV9 953 aa14.99□□□□□ -0.01
DEPDC1-201ENST00000370966 VGFO15240 615 aaPredicted RBP14.99□□□□□ -0.01
DEPDC1-201ENST00000370966 DEKP35659 375 aaKnown RBP14.99□□□□□ -0.01
DEPDC1-201ENST00000370966 FGD1P98174 961 aa14.99□□□□□ -0.01
DEPDC1-201ENST00000370966 NCOA2Q15596 1464 aa14.98□□□□□ -0.01
DEPDC1-201ENST00000370966 LMOD3Q0VAK6 560 aa14.98□□□□□ -0.01
DEPDC1-201ENST00000370966 CCDC146Q8IYE0 955 aa14.98□□□□□ -0.01
DEPDC1-201ENST00000370966 CCDC7Q96M83 1385 aa14.97□□□□□ -0.01
DEPDC1-201ENST00000370966 ZNF644Q9H582 1327 aaPredicted RBP14.96□□□□□ -0.02
DEPDC1-201ENST00000370966 ANKRD50Q9ULJ7 1429 aa14.95□□□□□ -0.02
DEPDC1-201ENST00000370966 E9PSI1 815 aa14.95□□□□□ -0.02
DEPDC1-201ENST00000370966 RTN4Q9NQC3 1192 aaKnown RBP14.95□□□□□ -0.02
DEPDC1-201ENST00000370966 DNTTIP2Q5QJE6 756 aaKnown RBP14.94□□□□□ -0.02
DEPDC1-201ENST00000370966 PTMSP20962 102 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms