RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 CLIP1P30622 1438 aa13.68□□□□□ -0.22
ATF3-206ENST00000366987 PRG4Q92954 1404 aaPredicted RBP13.68□□□□□ -0.22
ATF3-206ENST00000366987 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
ATF3-206ENST00000366987 DISP1Q96F81 1524 aa13.67□□□□□ -0.22
ATF3-206ENST00000366987 NAP1L5Q96NT1 182 aaPredicted RBP13.66□□□□□ -0.22
ATF3-206ENST00000366987 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
ATF3-206ENST00000366987 NCLP19338 710 aaKnown RBP13.62□□□□□ -0.23
ATF3-206ENST00000366987 IPO4Q8TEX9 1081 aaKnown RBP13.62□□□□□ -0.23
ATF3-206ENST00000366987 IPO9Q96P70 1041 aaKnown RBP13.62□□□□□ -0.23
ATF3-206ENST00000366987 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
ATF3-206ENST00000366987 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
ATF3-206ENST00000366987 NAP1L2Q9ULW6 460 aaPredicted RBP13.61□□□□□ -0.23
ATF3-206ENST00000366987 NEFMP07197 916 aa13.6□□□□□ -0.23
ATF3-206ENST00000366987 HSP90AA1P07900 732 aaKnown RBP13.6□□□□□ -0.23
ATF3-206ENST00000366987 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
ATF3-206ENST00000366987 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
ATF3-206ENST00000366987 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
ATF3-206ENST00000366987 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
ATF3-206ENST00000366987 ANP32AP39687 249 aaKnown RBP13.59□□□□□ -0.23
ATF3-206ENST00000366987 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
ATF3-206ENST00000366987 FHOD3Q2V2M9 1422 aa13.59□□□□□ -0.23
ATF3-206ENST00000366987 ARAP1Q96P48 1450 aa13.59□□□□□ -0.23
ATF3-206ENST00000366987 FMN1Q68DA7 1419 aa13.58□□□□□ -0.24
ATF3-206ENST00000366987 PAK3O75914 559 aaPredicted RBP13.57□□□□□ -0.24
ATF3-206ENST00000366987 ITGAEP38570 1179 aa13.56□□□□□ -0.24
ATF3-206ENST00000366987 P3H3Q8IVL6 736 aa13.56□□□□□ -0.24
ATF3-206ENST00000366987 PTPRGP23470 1445 aa13.56□□□□□ -0.24
ATF3-206ENST00000366987 PRDM4Q9UKN5 801 aa13.56□□□□□ -0.24
ATF3-206ENST00000366987 BRPF3Q9ULD4 1205 aa13.55□□□□□ -0.24
ATF3-206ENST00000366987 BCCIPQ9P287 314 aaKnown RBP eCLIP13.54□□□□□ -0.24
ATF3-206ENST00000366987 GSE1Q14687 1217 aa13.54□□□□□ -0.24
ATF3-206ENST00000366987 CHMP4AQ9BY43 222 aa13.54□□□□□ -0.24
ATF3-206ENST00000366987 NPM2Q86SE8 214 aaKnown RBP13.52□□□□□ -0.24
ATF3-206ENST00000366987 VPS8Q8N3P4 1428 aa13.52□□□□□ -0.24
ATF3-206ENST00000366987 RAPGEF6Q8TEU7 1601 aa13.52□□□□□ -0.24
ATF3-206ENST00000366987 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
ATF3-206ENST00000366987 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
ATF3-206ENST00000366987 ABCA8O94911 1581 aa13.51□□□□□ -0.25
ATF3-206ENST00000366987 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
ATF3-206ENST00000366987 HECW1Q76N89 1606 aa13.51□□□□□ -0.25
ATF3-206ENST00000366987 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
ATF3-206ENST00000366987 PCF11O94913 1555 aaKnown RBP13.5□□□□□ -0.25
ATF3-206ENST00000366987 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
ATF3-206ENST00000366987 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
ATF3-206ENST00000366987 CNGB1Q14028 1251 aaPredicted RBP13.5□□□□□ -0.25
ATF3-206ENST00000366987 CASKIN1Q8WXD9 1431 aa13.49□□□□□ -0.25
ATF3-206ENST00000366987 PPP4R2Q9NY27 417 aa13.49□□□□□ -0.25
ATF3-206ENST00000366987 ABCC2Q92887 1545 aa13.49□□□□□ -0.25
ATF3-206ENST00000366987 UHRF1BP1LA0JNW5 1464 aa13.49□□□□□ -0.25
ATF3-206ENST00000366987 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
ATF3-206ENST00000366987 PDCL3Q9H2J4 239 aa13.48□□□□□ -0.25
ATF3-206ENST00000366987 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
ATF3-206ENST00000366987 ARID4BQ4LE39 1312 aaPredicted RBP13.46□□□□□ -0.25
ATF3-206ENST00000366987 KCNA4P22459 653 aa13.46□□□□□ -0.25
ATF3-206ENST00000366987 TEX2Q8IWB9 1127 aa13.46□□□□□ -0.25
ATF3-206ENST00000366987 ADCY10Q96PN6 1610 aa13.45□□□□□ -0.26
ATF3-206ENST00000366987 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
ATF3-206ENST00000366987 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
ATF3-206ENST00000366987 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
ATF3-206ENST00000366987 CNKSR2Q8WXI2 1034 aa13.44□□□□□ -0.26
ATF3-206ENST00000366987 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
ATF3-206ENST00000366987 HSP90B1P14625 803 aaKnown RBP13.43□□□□□ -0.26
ATF3-206ENST00000366987 NUP153P49790 1475 aaKnown RBP13.43□□□□□ -0.26
ATF3-206ENST00000366987 VGFO15240 615 aaPredicted RBP13.43□□□□□ -0.26
ATF3-206ENST00000366987 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
ATF3-206ENST00000366987 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
ATF3-206ENST00000366987 FTSJ3Q8IY81 847 aaKnown RBP13.42□□□□□ -0.26
ATF3-206ENST00000366987 LRRIQ1Q96JM4 1722 aa13.42□□□□□ -0.26
ATF3-206ENST00000366987 CFAP43Q8NDM7 1665 aa13.41□□□□□ -0.26
ATF3-206ENST00000366987 EPRSP07814 1512 aaKnown RBP13.41□□□□□ -0.26
ATF3-206ENST00000366987 KDM5BQ9UGL1 1544 aa13.41□□□□□ -0.26
ATF3-206ENST00000366987 ZCCHC11Q5TAX3 1644 aaKnown RBP13.4□□□□□ -0.26
ATF3-206ENST00000366987 MAP3K1Q13233 1512 aa13.4□□□□□ -0.26
ATF3-206ENST00000366987 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
ATF3-206ENST00000366987 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
ATF3-206ENST00000366987 DHX37Q8IY37 1157 aaKnown RBP13.39□□□□□ -0.27
ATF3-206ENST00000366987 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
ATF3-206ENST00000366987 TIAM1Q13009 1591 aa13.38□□□□□ -0.27
ATF3-206ENST00000366987 TPM2P07951 284 aa13.37□□□□□ -0.27
ATF3-206ENST00000366987 CHMP4BQ9H444 224 aaKnown RBP13.37□□□□□ -0.27
ATF3-206ENST00000366987 ATP10BO94823 1461 aa13.37□□□□□ -0.27
ATF3-206ENST00000366987 CDK13Q14004 1512 aaKnown RBP13.37□□□□□ -0.27
ATF3-206ENST00000366987 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
ATF3-206ENST00000366987 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
ATF3-206ENST00000366987 SMAP1Q8IYB5 467 aaPredicted RBP13.35□□□□□ -0.27
ATF3-206ENST00000366987 PNNQ9H307 717 aaKnown RBP13.35□□□□□ -0.27
ATF3-206ENST00000366987 CLCN1P35523 988 aa13.34□□□□□ -0.27
ATF3-206ENST00000366987 MAPKBP1O60336 1514 aa13.33□□□□□ -0.28
ATF3-206ENST00000366987 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
ATF3-206ENST00000366987 EHBP1L1Q8N3D4 1523 aa13.32□□□□□ -0.28
ATF3-206ENST00000366987 RGS3P49796 1198 aa13.31□□□□□ -0.28
ATF3-206ENST00000366987 UTP14CQ5TAP6 766 aaKnown RBP13.31□□□□□ -0.28
ATF3-206ENST00000366987 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
ATF3-206ENST00000366987 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
ATF3-206ENST00000366987 C14orf37Q86TY3 774 aa13.3□□□□□ -0.28
ATF3-206ENST00000366987 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
ATF3-206ENST00000366987 WDR7Q9Y4E6 1490 aa13.29□□□□□ -0.28
ATF3-206ENST00000366987 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
ATF3-206ENST00000366987 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
ATF3-206ENST00000366987 ASXL2Q76L83 1435 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms