RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 NISCHQ9Y2I1 1504 aa20.1■□□□□ 0.81
ATF3-206ENST00000366987 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
ATF3-206ENST00000366987 MYT1Q01538 1121 aa18.34■□□□□ 0.53
ATF3-206ENST00000366987 CCDC180Q9P1Z9 1646 aa17.81■□□□□ 0.44
ATF3-206ENST00000366987 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
ATF3-206ENST00000366987 ABCC9O60706 1549 aa16.99■□□□□ 0.31
ATF3-206ENST00000366987 HRCP23327 699 aa16.82■□□□□ 0.28
ATF3-206ENST00000366987 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
ATF3-206ENST00000366987 ERICH6Q7L0X2 663 aa16.7■□□□□ 0.26
ATF3-206ENST00000366987 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
ATF3-206ENST00000366987 MYO15BQ96JP2 1530 aa16.65■□□□□ 0.26
ATF3-206ENST00000366987 NACADO15069 1562 aa16.63■□□□□ 0.25
ATF3-206ENST00000366987 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
ATF3-206ENST00000366987 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
ATF3-206ENST00000366987 PRKCSHP14314 528 aaPredicted RBP16.57■□□□□ 0.24
ATF3-206ENST00000366987 APLP2Q06481 763 aa16.5■□□□□ 0.23
ATF3-206ENST00000366987 SLC24A1O60721 1099 aa16.35■□□□□ 0.21
ATF3-206ENST00000366987 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
ATF3-206ENST00000366987 BCL11AQ9H165 835 aa16.25■□□□□ 0.19
ATF3-206ENST00000366987 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
ATF3-206ENST00000366987 SCRIBQ14160 1630 aa16.2■□□□□ 0.18
ATF3-206ENST00000366987 CENPBP07199 599 aaPredicted RBP16.05■□□□□ 0.16
ATF3-206ENST00000366987 BICRAQ9NZM4 1560 aa16.02■□□□□ 0.15
ATF3-206ENST00000366987 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
ATF3-206ENST00000366987 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
ATF3-206ENST00000366987 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
ATF3-206ENST00000366987 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
ATF3-206ENST00000366987 DAXXQ9UER7 740 aaPredicted RBP15.86■□□□□ 0.13
ATF3-206ENST00000366987 ACIN1Q9UKV3 1341 aaKnown RBP15.79■□□□□ 0.12
ATF3-206ENST00000366987 ZEB1P37275 1124 aaPredicted RBP15.75■□□□□ 0.11
ATF3-206ENST00000366987 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
ATF3-206ENST00000366987 ANP32EQ9BTT0 268 aa15.62■□□□□ 0.09
ATF3-206ENST00000366987 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
ATF3-206ENST00000366987 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
ATF3-206ENST00000366987 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
ATF3-206ENST00000366987 SMARCA4P51532 1647 aa15.55■□□□□ 0.08
ATF3-206ENST00000366987 PCGF6Q9BYE7 350 aa15.55■□□□□ 0.08
ATF3-206ENST00000366987 CHIC1Q5VXU3 224 aa15.55■□□□□ 0.08
ATF3-206ENST00000366987 GTF3C3Q9Y5Q9 886 aa15.53■□□□□ 0.08
ATF3-206ENST00000366987 MROH2BQ7Z745 1585 aa15.47■□□□□ 0.07
ATF3-206ENST00000366987 NEUROD1Q13562 356 aa15.45■□□□□ 0.06
ATF3-206ENST00000366987 EIF5BO60841 1220 aaKnown RBP15.44■□□□□ 0.06
ATF3-206ENST00000366987 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
ATF3-206ENST00000366987 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
ATF3-206ENST00000366987 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
ATF3-206ENST00000366987 SMARCA2P51531 1590 aa15.4■□□□□ 0.06
ATF3-206ENST00000366987 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
ATF3-206ENST00000366987 WIZO95785 1651 aa15.34■□□□□ 0.05
ATF3-206ENST00000366987 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
ATF3-206ENST00000366987 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
ATF3-206ENST00000366987 UBE2Q2Q8WVN8 375 aa15.29■□□□□ 0.04
ATF3-206ENST00000366987 BAZ1BQ9UIG0 1483 aaKnown RBP15.26■□□□□ 0.03
ATF3-206ENST00000366987 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
ATF3-206ENST00000366987 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
ATF3-206ENST00000366987 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
ATF3-206ENST00000366987 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.02
ATF3-206ENST00000366987 CLSPNQ9HAW4 1339 aa15.2■□□□□ 0.02
ATF3-206ENST00000366987 TRIM26Q12899 539 aaPredicted RBP15.14■□□□□ 0.01
ATF3-206ENST00000366987 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
ATF3-206ENST00000366987 ERICH6BQ5W0A0 696 aa15.04■□□□□ -0
ATF3-206ENST00000366987 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
ATF3-206ENST00000366987 ANO8Q9HCE9 1232 aaPredicted RBP14.92□□□□□ -0.02
ATF3-206ENST00000366987 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
ATF3-206ENST00000366987 PRDM2Q13029 1718 aa14.87□□□□□ -0.03
ATF3-206ENST00000366987 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
ATF3-206ENST00000366987 CFTRP13569 1480 aa14.85□□□□□ -0.03
ATF3-206ENST00000366987 TSHZ2Q9NRE2 1034 aa14.85□□□□□ -0.03
ATF3-206ENST00000366987 PKNOX2Q96KN3 472 aa14.83□□□□□ -0.04
ATF3-206ENST00000366987 PODXL2Q9NZ53 605 aa14.81□□□□□ -0.04
ATF3-206ENST00000366987 DIEXFQ68CQ4 756 aaKnown RBP14.8□□□□□ -0.04
ATF3-206ENST00000366987 NESP48681 1621 aa14.79□□□□□ -0.04
ATF3-206ENST00000366987 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
ATF3-206ENST00000366987 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
ATF3-206ENST00000366987 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
ATF3-206ENST00000366987 FANCD2Q9BXW9 1451 aa14.7□□□□□ -0.06
ATF3-206ENST00000366987 CEP164Q9UPV0 1460 aa14.67□□□□□ -0.06
ATF3-206ENST00000366987 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
ATF3-206ENST00000366987 NEFLP07196 543 aa14.62□□□□□ -0.07
ATF3-206ENST00000366987 SALL2Q9Y467 1007 aaPredicted RBP14.62□□□□□ -0.07
ATF3-206ENST00000366987 SUPT16HQ9Y5B9 1047 aaKnown RBP14.6□□□□□ -0.07
ATF3-206ENST00000366987 MRC2Q9UBG0 1479 aa14.58□□□□□ -0.08
ATF3-206ENST00000366987 ABCC8Q09428 1581 aa14.57□□□□□ -0.08
ATF3-206ENST00000366987 THOC2Q8NI27 1593 aaKnown RBP14.57□□□□□ -0.08
ATF3-206ENST00000366987 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
ATF3-206ENST00000366987 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
ATF3-206ENST00000366987 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
ATF3-206ENST00000366987 RANGAP1P46060 587 aaPredicted RBP14.54□□□□□ -0.08
ATF3-206ENST00000366987 WRNQ14191 1432 aaPredicted RBP eCLIP14.54□□□□□ -0.08
ATF3-206ENST00000366987 WDR62O43379 1518 aa14.53□□□□□ -0.08
ATF3-206ENST00000366987 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
ATF3-206ENST00000366987 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.09
ATF3-206ENST00000366987 TOP2BQ02880 1626 aa14.5□□□□□ -0.09
ATF3-206ENST00000366987 CUX1P39880 1505 aa14.5□□□□□ -0.09
ATF3-206ENST00000366987 TOPBP1Q92547 1522 aa14.5□□□□□ -0.09
ATF3-206ENST00000366987 DEKP35659 375 aaKnown RBP14.49□□□□□ -0.09
ATF3-206ENST00000366987 SYNJ1O43426 1573 aa14.49□□□□□ -0.09
ATF3-206ENST00000366987 ARXQ96QS3 562 aa14.49□□□□□ -0.09
ATF3-206ENST00000366987 GLIPR1L2Q4G1C9 344 aa14.47□□□□□ -0.09
ATF3-206ENST00000366987 FANCIQ9NVI1 1328 aa14.45□□□□□ -0.1
ATF3-206ENST00000366987 CUX2O14529 1486 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms