RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
SNX6-201ENST00000362031 TRHP20396 242 aaPredicted RBP16.53■□□□□ 0.24
SNX6-201ENST00000362031 ARHGAP5Q13017 1502 aa16.52■□□□□ 0.23
SNX6-201ENST00000362031 TSPOAP1O95153 1857 aa16.51■□□□□ 0.23
SNX6-201ENST00000362031 PPRC1Q5VV67 1664 aaKnown RBP16.51■□□□□ 0.23
SNX6-201ENST00000362031 FAM50AQ14320 339 aaKnown RBP16.5■□□□□ 0.23
SNX6-201ENST00000362031 ITSN2Q9NZM3 1697 aa16.5■□□□□ 0.23
SNX6-201ENST00000362031 MIA2Q96PC5 1412 aa16.5■□□□□ 0.23
SNX6-201ENST00000362031 PTPN23Q9H3S7 1636 aa16.5■□□□□ 0.23
SNX6-201ENST00000362031 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
SNX6-201ENST00000362031 FANCAO15360 1455 aa16.49■□□□□ 0.23
SNX6-201ENST00000362031 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
SNX6-201ENST00000362031 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
SNX6-201ENST00000362031 ARHGEF12Q9NZN5 1544 aa16.48■□□□□ 0.23
SNX6-201ENST00000362031 TCOF1Q13428 1488 aaKnown RBP16.47■□□□□ 0.23
SNX6-201ENST00000362031 ARAP3Q8WWN8 1544 aa16.47■□□□□ 0.23
SNX6-201ENST00000362031 HNRNPMP52272 730 aaKnown RBP eCLIP16.46■□□□□ 0.23
SNX6-201ENST00000362031 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
SNX6-201ENST00000362031 ITGAEP38570 1179 aa16.45■□□□□ 0.22
SNX6-201ENST00000362031 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
SNX6-201ENST00000362031 PTPRKQ15262 1439 aa16.44■□□□□ 0.22
SNX6-201ENST00000362031 AKNAQ7Z591 1439 aa16.44■□□□□ 0.22
SNX6-201ENST00000362031 MBD5Q9P267 1494 aa16.44■□□□□ 0.22
SNX6-201ENST00000362031 SYCP2Q9BX26 1530 aa16.43■□□□□ 0.22
SNX6-201ENST00000362031 ABCC1P33527 1531 aa16.41■□□□□ 0.22
SNX6-201ENST00000362031 TRAPPC8Q9Y2L5 1435 aa16.41■□□□□ 0.22
SNX6-201ENST00000362031 PCGF6Q9BYE7 350 aa16.41■□□□□ 0.22
SNX6-201ENST00000362031 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNX6-201ENST00000362031 ADGRL1O94910 1474 aa16.4■□□□□ 0.22
SNX6-201ENST00000362031 ABCC5O15440 1437 aa16.4■□□□□ 0.22
SNX6-201ENST00000362031 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
SNX6-201ENST00000362031 COL17A1Q9UMD9 1497 aaPredicted RBP16.4■□□□□ 0.22
SNX6-201ENST00000362031 AFAP1Q8N556 730 aa16.4■□□□□ 0.22
SNX6-201ENST00000362031 NEO1Q92859 1461 aa16.39■□□□□ 0.21
SNX6-201ENST00000362031 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
SNX6-201ENST00000362031 RAPGEF3O95398 923 aa16.38■□□□□ 0.21
SNX6-201ENST00000362031 DAPK1P53355 1430 aa16.37■□□□□ 0.21
SNX6-201ENST00000362031 CHIC2Q9UKJ5 165 aa16.37■□□□□ 0.21
SNX6-201ENST00000362031 TEX14Q8IWB6 1497 aa16.36■□□□□ 0.21
SNX6-201ENST00000362031 DNMT1P26358 1616 aaKnown RBP16.36■□□□□ 0.21
SNX6-201ENST00000362031 CFAP74Q9C0B2 1584 aa16.35■□□□□ 0.21
SNX6-201ENST00000362031 PLEKHH2Q8IVE3 1493 aa16.34■□□□□ 0.21
SNX6-201ENST00000362031 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
SNX6-201ENST00000362031 CCDC141Q6ZP82 1450 aa16.33■□□□□ 0.2
SNX6-201ENST00000362031 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.2
SNX6-201ENST00000362031 FRMPD1Q5SYB0 1578 aa16.32■□□□□ 0.2
SNX6-201ENST00000362031 DENND4BO75064 1496 aaPredicted RBP16.31■□□□□ 0.2
SNX6-201ENST00000362031 CROCC2H7BZ55 1655 aa16.3■□□□□ 0.2
SNX6-201ENST00000362031 RICTORQ6R327 1708 aa16.3■□□□□ 0.2
SNX6-201ENST00000362031 C9orf84Q5VXU9 1444 aa16.29■□□□□ 0.2
SNX6-201ENST00000362031 RRP7BPQ9NSQ0 103 aa16.29■□□□□ 0.2
SNX6-201ENST00000362031 RSPH4AQ5TD94 716 aa16.28■□□□□ 0.2
SNX6-201ENST00000362031 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
SNX6-201ENST00000362031 TSPY4P0CV99 314 aa16.28■□□□□ 0.2
SNX6-201ENST00000362031 TSPY10P0CW01 314 aa16.28■□□□□ 0.2
SNX6-201ENST00000362031 KDM5CP41229 1560 aa16.27■□□□□ 0.2
SNX6-201ENST00000362031 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.19
SNX6-201ENST00000362031 SHANK2Q9UPX8 1470 aa16.26■□□□□ 0.19
SNX6-201ENST00000362031 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
SNX6-201ENST00000362031 ZFYVE16Q7Z3T8 1539 aa16.25■□□□□ 0.19
SNX6-201ENST00000362031 KIDINS220Q9ULH0 1771 aa16.24■□□□□ 0.19
SNX6-201ENST00000362031 YEATS2Q9ULM3 1422 aa16.24■□□□□ 0.19
SNX6-201ENST00000362031 INO80Q9ULG1 1556 aaPredicted RBP16.23■□□□□ 0.19
SNX6-201ENST00000362031 MAST1Q9Y2H9 1570 aa16.23■□□□□ 0.19
SNX6-201ENST00000362031 ADGRL2O95490 1459 aa16.23■□□□□ 0.19
SNX6-201ENST00000362031 NAIPQ13075 1403 aa16.22■□□□□ 0.19
SNX6-201ENST00000362031 ATP7AQ04656 1500 aa16.22■□□□□ 0.19
SNX6-201ENST00000362031 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
SNX6-201ENST00000362031 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
SNX6-201ENST00000362031 KDM6BO15054 1643 aa16.21■□□□□ 0.19
SNX6-201ENST00000362031 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
SNX6-201ENST00000362031 RTEL1-TNFRSF6BF6WH68 1400 aa16.21■□□□□ 0.19
SNX6-201ENST00000362031 HFM1A2PYH4 1435 aa16.2■□□□□ 0.18
SNX6-201ENST00000362031 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
SNX6-201ENST00000362031 KIF15Q9NS87 1388 aa16.2■□□□□ 0.18
SNX6-201ENST00000362031 ADGBQ8N7X0 1667 aa16.2■□□□□ 0.18
SNX6-201ENST00000362031 HECW2Q9P2P5 1572 aa16.2■□□□□ 0.18
SNX6-201ENST00000362031 ZMYM4Q5VZL5 1548 aa16.2■□□□□ 0.18
SNX6-201ENST00000362031 ABCA6Q8N139 1617 aa16.18■□□□□ 0.18
SNX6-201ENST00000362031 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
SNX6-201ENST00000362031 SETD5Q9C0A6 1442 aa16.16■□□□□ 0.18
SNX6-201ENST00000362031 DIP2CQ9Y2E4 1556 aa16.16■□□□□ 0.18
SNX6-201ENST00000362031 RAB3GAP2Q9H2M9 1393 aa16.16■□□□□ 0.18
SNX6-201ENST00000362031 GCC2Q8IWJ2 1684 aa16.14■□□□□ 0.17
SNX6-201ENST00000362031 ANKRD50Q9ULJ7 1429 aa16.14■□□□□ 0.17
SNX6-201ENST00000362031 SIGLEC1Q9BZZ2 1709 aa16.14■□□□□ 0.17
SNX6-201ENST00000362031 MAGI2Q86UL8 1455 aa16.13■□□□□ 0.17
SNX6-201ENST00000362031 DHX29Q7Z478 1369 aaKnown RBP16.12■□□□□ 0.17
SNX6-201ENST00000362031 DUOX2Q9NRD8 1548 aa16.11■□□□□ 0.17
SNX6-201ENST00000362031 A2MP01023 1474 aa16.11■□□□□ 0.17
SNX6-201ENST00000362031 ARHGEF40Q8TER5 1519 aa16.1■□□□□ 0.17
SNX6-201ENST00000362031 ATP10AO60312 1499 aa16.1■□□□□ 0.17
SNX6-201ENST00000362031 ERBINQ96RT1 1412 aa16.07■□□□□ 0.16
SNX6-201ENST00000362031 KIF3BO15066 747 aa16.07■□□□□ 0.16
SNX6-201ENST00000362031 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.165e-7■■□□□ 12.3
SNX6-201ENST00000362031 REREQ9P2R6 1566 aa16.03■□□□□ 0.16
SNX6-201ENST00000362031 HRCP23327 699 aa16.02■□□□□ 0.16
SNX6-201ENST00000362031 TRIM52Q96A61 297 aa16.02■□□□□ 0.16
SNX6-201ENST00000362031 MROH1Q8NDA8 1641 aa16.02■□□□□ 0.16
SNX6-201ENST00000362031 GGT6Q6P531 493 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms