RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 PNISRQ8TF01 805 aaKnown RBP21.66■■□□□ 1.06
CTPS2-201ENST00000359276 CDCA7LQ96GN5 454 aa21.66■■□□□ 1.06
CTPS2-201ENST00000359276 UBE2Q2Q8WVN8 375 aa21.65■■□□□ 1.06
CTPS2-201ENST00000359276 ZNF777Q9ULD5 760 aaPredicted RBP21.65■■□□□ 1.06
CTPS2-201ENST00000359276 CARD11Q9BXL7 1154 aa21.64■■□□□ 1.05
CTPS2-201ENST00000359276 CRBNQ96SW2 442 aa21.63■■□□□ 1.05
CTPS2-201ENST00000359276 FRAT2O75474 233 aaPredicted RBP21.63■■□□□ 1.05
CTPS2-201ENST00000359276 NCOA1Q15788 1441 aa21.62■■□□□ 1.05
CTPS2-201ENST00000359276 PCF11O94913 1555 aaKnown RBP21.61■■□□□ 1.05
CTPS2-201ENST00000359276 MS4A1P11836 297 aa21.6■■□□□ 1.05
CTPS2-201ENST00000359276 MAP3K1Q13233 1512 aa21.6■■□□□ 1.05
CTPS2-201ENST00000359276 CC2D1BQ5T0F9 858 aaKnown RBP21.58■■□□□ 1.05
CTPS2-201ENST00000359276 WASHC2CQ9Y4E1 1318 aa21.56■■□□□ 1.04
CTPS2-201ENST00000359276 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
CTPS2-201ENST00000359276 BIVM-ERCC5R4GMW8 1640 aa21.56■■□□□ 1.04
CTPS2-201ENST00000359276 SLKQ9H2G2 1235 aaPredicted RBP21.55■■□□□ 1.04
CTPS2-201ENST00000359276 USP47Q96K76 1375 aa21.53■■□□□ 1.04
CTPS2-201ENST00000359276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.53■■□□□ 1.04
CTPS2-201ENST00000359276 MYOM3Q5VTT5 1437 aa21.53■■□□□ 1.04
CTPS2-201ENST00000359276 RNF123Q5XPI4 1314 aa21.53■■□□□ 1.04
CTPS2-201ENST00000359276 CASKIN1Q8WXD9 1431 aa21.53■■□□□ 1.04
CTPS2-201ENST00000359276 NAP1L5Q96NT1 182 aaPredicted RBP21.53■■□□□ 1.04
CTPS2-201ENST00000359276 NCOA2Q15596 1464 aa21.52■■□□□ 1.03
CTPS2-201ENST00000359276 PTPN23Q9H3S7 1636 aa21.51■■□□□ 1.03
CTPS2-201ENST00000359276 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
CTPS2-201ENST00000359276 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
CTPS2-201ENST00000359276 CFTRP13569 1480 aa21.51■■□□□ 1.03
CTPS2-201ENST00000359276 RSPH6AQ9H0K4 717 aa21.5■■□□□ 1.03
CTPS2-201ENST00000359276 GLIPR1L2Q4G1C9 344 aa21.48■■□□□ 1.03
CTPS2-201ENST00000359276 BICRAQ9NZM4 1560 aa21.47■■□□□ 1.03
CTPS2-201ENST00000359276 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
CTPS2-201ENST00000359276 PKD2Q13563 968 aa21.47■■□□□ 1.03
CTPS2-201ENST00000359276 SPRYD3Q8NCJ5 442 aa21.47■■□□□ 1.03
CTPS2-201ENST00000359276 C20orf194Q5TEA3 1177 aa21.46■■□□□ 1.03
CTPS2-201ENST00000359276 ARID4BQ4LE39 1312 aaPredicted RBP21.46■■□□□ 1.03
CTPS2-201ENST00000359276 MYBBP1AQ9BQG0 1328 aaKnown RBP21.46■■□□□ 1.03
CTPS2-201ENST00000359276 GZF1Q9H116 711 aaPredicted RBP21.45■■□□□ 1.02
CTPS2-201ENST00000359276 FGD5Q6ZNL6 1462 aa21.45■■□□□ 1.02
CTPS2-201ENST00000359276 DCAF11Q8TEB1 546 aa21.44■■□□□ 1.02
CTPS2-201ENST00000359276 RGL3Q3MIN7 710 aa21.44■■□□□ 1.02
CTPS2-201ENST00000359276 ZNF644Q9H582 1327 aaPredicted RBP21.44■■□□□ 1.02
CTPS2-201ENST00000359276 RALBP1Q15311 655 aa21.43■■□□□ 1.02
CTPS2-201ENST00000359276 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
CTPS2-201ENST00000359276 VSIG10Q8N0Z9 540 aa21.42■■□□□ 1.02
CTPS2-201ENST00000359276 NLRP13Q86W25 1043 aa21.42■■□□□ 1.02
CTPS2-201ENST00000359276 CANXP27824 592 aaKnown RBP21.41■■□□□ 1.02
CTPS2-201ENST00000359276 KIF15Q9NS87 1388 aa21.41■■□□□ 1.02
CTPS2-201ENST00000359276 PDE3BQ13370 1112 aa21.4■■□□□ 1.02
CTPS2-201ENST00000359276 POGKQ9P215 609 aa21.39■■□□□ 1.01
CTPS2-201ENST00000359276 DHX29Q7Z478 1369 aaKnown RBP21.39■■□□□ 1.01
CTPS2-201ENST00000359276 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
CTPS2-201ENST00000359276 FAM43AQ8N2R8 423 aa21.37■■□□□ 1.01
CTPS2-201ENST00000359276 WDR43Q15061 677 aaKnown RBP eCLIP21.36■■□□□ 1.01
CTPS2-201ENST00000359276 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.36■■□□□ 1.01
CTPS2-201ENST00000359276 ANKRD30BQ9BXX2 1392 aa21.35■■□□□ 1.01
CTPS2-201ENST00000359276 PKNOX2Q96KN3 472 aa21.35■■□□□ 1.01
CTPS2-201ENST00000359276 KDM5BQ9UGL1 1544 aa21.35■■□□□ 1.01
CTPS2-201ENST00000359276 KTN1Q86UP2 1357 aaKnown RBP21.34■■□□□ 1.01
CTPS2-201ENST00000359276 BECN1Q14457 450 aa21.34■■□□□ 1.01
CTPS2-201ENST00000359276 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1.01
CTPS2-201ENST00000359276 CENPQQ7L2Z9 268 aaPredicted RBP21.33■■□□□ 1.01
CTPS2-201ENST00000359276 PNNQ9H307 717 aaKnown RBP21.33■■□□□ 1
CTPS2-201ENST00000359276 BRD4O60885 1362 aaPredicted RBP21.31■■□□□ 1
CTPS2-201ENST00000359276 CFAP43Q8NDM7 1665 aa21.29■■□□□ 1
CTPS2-201ENST00000359276 CFDP1Q9UEE9 299 aaPredicted RBP21.29■■□□□ 1
CTPS2-201ENST00000359276 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
CTPS2-201ENST00000359276 ROCK2O75116 1388 aaKnown RBP21.28■■□□□ 1
CTPS2-201ENST00000359276 L1TD1Q5T7N2 865 aaKnown RBP21.27■□□□□ 0.99
CTPS2-201ENST00000359276 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
CTPS2-201ENST00000359276 HSP90AA2PQ14568 343 aaPredicted RBP21.25■□□□□ 0.99
CTPS2-201ENST00000359276 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
CTPS2-201ENST00000359276 RPRD2Q5VT52 1461 aaKnown RBP21.25■□□□□ 0.99
CTPS2-201ENST00000359276 HSP90AA1P07900 732 aaKnown RBP21.24■□□□□ 0.99
CTPS2-201ENST00000359276 CCDC146Q8IYE0 955 aa21.24■□□□□ 0.99
CTPS2-201ENST00000359276 SPATA31E1Q6ZUB1 1445 aa21.23■□□□□ 0.99
CTPS2-201ENST00000359276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.991e-6■■□□□ 12.6
CTPS2-201ENST00000359276 ADAMTS8Q9UP79 889 aa21.23■□□□□ 0.99
CTPS2-201ENST00000359276 C8orf34Q49A92 452 aa21.22■□□□□ 0.99
CTPS2-201ENST00000359276 PANK3Q9H999 370 aa21.22■□□□□ 0.99
CTPS2-201ENST00000359276 RRAGDQ9NQL2 400 aaPredicted RBP21.22■□□□□ 0.99
CTPS2-201ENST00000359276 GOLGA6L3A6NEY3 463 aa21.21■□□□□ 0.99
CTPS2-201ENST00000359276 MIA2Q96PC5 1412 aa21.2■□□□□ 0.98
CTPS2-201ENST00000359276 DENND4BO75064 1496 aaPredicted RBP21.19■□□□□ 0.98
CTPS2-201ENST00000359276 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
CTPS2-201ENST00000359276 GOLGA2Q08379 1002 aa21.18■□□□□ 0.98
CTPS2-201ENST00000359276 KDM6BO15054 1643 aa21.18■□□□□ 0.98
CTPS2-201ENST00000359276 NUP155O75694 1391 aa21.17■□□□□ 0.98
CTPS2-201ENST00000359276 EFCAB5A4FU69 1503 aa21.16■□□□□ 0.98
CTPS2-201ENST00000359276 KNSTRNQ9Y448 316 aa21.15■□□□□ 0.98
CTPS2-201ENST00000359276 TRIM44Q96DX7 344 aaPredicted RBP21.15■□□□□ 0.98
CTPS2-201ENST00000359276 LRPPRCP42704 1394 aaKnown RBP21.14■□□□□ 0.98
CTPS2-201ENST00000359276 ZMYND15Q9H091 742 aa21.14■□□□□ 0.98
CTPS2-201ENST00000359276 BCAR3O75815 825 aa21.13■□□□□ 0.97
CTPS2-201ENST00000359276 NBPF1Q3BBV0 1214 aa21.13■□□□□ 0.97
CTPS2-201ENST00000359276 SUPT6HQ7KZ85 1726 aaKnown RBP21.13■□□□□ 0.97
CTPS2-201ENST00000359276 COG6Q9Y2V7 657 aa21.12■□□□□ 0.97
CTPS2-201ENST00000359276 PANK2Q9BZ23 570 aa21.11■□□□□ 0.97
CTPS2-201ENST00000359276 SEC24BO95487 1268 aa21.11■□□□□ 0.97
CTPS2-201ENST00000359276 TEX14Q8IWB6 1497 aa21.11■□□□□ 0.97
CTPS2-201ENST00000359276 TSPY4P0CV99 314 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms