RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 NISCHQ9Y2I1 1504 aa29.91■■■□□ 2.38
CTPS2-201ENST00000359276 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
CTPS2-201ENST00000359276 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
CTPS2-201ENST00000359276 HRCP23327 699 aa27.49■■□□□ 1.99
CTPS2-201ENST00000359276 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
CTPS2-201ENST00000359276 PPARGC1BQ86YN6 1023 aaKnown RBP27.31■■□□□ 1.96
CTPS2-201ENST00000359276 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.87
CTPS2-201ENST00000359276 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
CTPS2-201ENST00000359276 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
CTPS2-201ENST00000359276 MYO15BQ96JP2 1530 aa26.47■■□□□ 1.83
CTPS2-201ENST00000359276 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
CTPS2-201ENST00000359276 TRIM26Q12899 539 aaPredicted RBP26.19■■□□□ 1.78
CTPS2-201ENST00000359276 EHMT2Q96KQ7 1210 aa26.16■■□□□ 1.78
CTPS2-201ENST00000359276 SCAF1Q9H7N4 1312 aaKnown RBP26.07■■□□□ 1.76
CTPS2-201ENST00000359276 ZEB1P37275 1124 aaPredicted RBP25.95■■□□□ 1.74
CTPS2-201ENST00000359276 FAM9AQ8IZU1 332 aaPredicted RBP25.9■■□□□ 1.74
CTPS2-201ENST00000359276 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
CTPS2-201ENST00000359276 GTF3C3Q9Y5Q9 886 aa25.53■■□□□ 1.68
CTPS2-201ENST00000359276 NEUROD1Q13562 356 aa25.5■■□□□ 1.67
CTPS2-201ENST00000359276 CCER1Q8TC90 406 aaPredicted RBP25.5■■□□□ 1.67
CTPS2-201ENST00000359276 ACIN1Q9UKV3 1341 aaKnown RBP25.49■■□□□ 1.67
CTPS2-201ENST00000359276 CENPBP07199 599 aaPredicted RBP25.48■■□□□ 1.67
CTPS2-201ENST00000359276 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
CTPS2-201ENST00000359276 TTBK1Q5TCY1 1321 aaPredicted RBP25.45■■□□□ 1.66
CTPS2-201ENST00000359276 MYT1Q01538 1121 aa25.45■■□□□ 1.66
CTPS2-201ENST00000359276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.44■■□□□ 1.66
CTPS2-201ENST00000359276 YTHDC1Q96MU7 727 aaKnown RBP25.36■■□□□ 1.65
CTPS2-201ENST00000359276 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
CTPS2-201ENST00000359276 DIEXFQ68CQ4 756 aaKnown RBP25.27■■□□□ 1.64
CTPS2-201ENST00000359276 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.64
CTPS2-201ENST00000359276 ZNF316A6NFI3 1004 aaPredicted RBP24.64■■□□□ 1.53
CTPS2-201ENST00000359276 MIER1Q8N108 512 aa24.56■■□□□ 1.52
CTPS2-201ENST00000359276 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
CTPS2-201ENST00000359276 UBTFP17480 764 aaKnown RBP24.41■■□□□ 1.5
CTPS2-201ENST00000359276 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
CTPS2-201ENST00000359276 RANGAP1P46060 587 aaPredicted RBP24.31■■□□□ 1.48
CTPS2-201ENST00000359276 BCANQ96GW7 911 aa24.19■■□□□ 1.46
CTPS2-201ENST00000359276 APLP2Q06481 763 aa24.14■■□□□ 1.45
CTPS2-201ENST00000359276 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
CTPS2-201ENST00000359276 SUPT16HQ9Y5B9 1047 aaKnown RBP24.06■■□□□ 1.44
CTPS2-201ENST00000359276 BCL11AQ9H165 835 aa24.02■■□□□ 1.44
CTPS2-201ENST00000359276 ANP32EQ9BTT0 268 aa24.01■■□□□ 1.43
CTPS2-201ENST00000359276 SCRIBQ14160 1630 aa24■■□□□ 1.43
CTPS2-201ENST00000359276 ABCC9O60706 1549 aa23.95■■□□□ 1.42
CTPS2-201ENST00000359276 TSHZ2Q9NRE2 1034 aa23.91■■□□□ 1.42
CTPS2-201ENST00000359276 CEP162Q5TB80 1403 aa23.88■■□□□ 1.41
CTPS2-201ENST00000359276 CSRNP3Q8WYN3 585 aa23.86■■□□□ 1.41
CTPS2-201ENST00000359276 FKBP8Q14318 412 aa23.78■■□□□ 1.4
CTPS2-201ENST00000359276 NEFLP07196 543 aa23.77■■□□□ 1.4
CTPS2-201ENST00000359276 ITGAEP38570 1179 aa23.77■■□□□ 1.4
CTPS2-201ENST00000359276 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
CTPS2-201ENST00000359276 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
CTPS2-201ENST00000359276 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
CTPS2-201ENST00000359276 KCNH8Q96L42 1107 aa23.63■■□□□ 1.37
CTPS2-201ENST00000359276 SOGA1O94964 1423 aa23.63■■□□□ 1.37
CTPS2-201ENST00000359276 TNIKQ9UKE5 1360 aa23.58■■□□□ 1.37
CTPS2-201ENST00000359276 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
CTPS2-201ENST00000359276 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
CTPS2-201ENST00000359276 MROH2BQ7Z745 1585 aa23.53■■□□□ 1.36
CTPS2-201ENST00000359276 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
CTPS2-201ENST00000359276 TRIM52Q96A61 297 aa23.51■■□□□ 1.35
CTPS2-201ENST00000359276 DDX10Q13206 875 aaKnown RBP23.5■■□□□ 1.35
CTPS2-201ENST00000359276 RBM19Q9Y4C8 960 aaKnown RBP23.48■■□□□ 1.35
CTPS2-201ENST00000359276 HIRIP3Q9BW71 556 aaPredicted RBP23.41■■□□□ 1.34
CTPS2-201ENST00000359276 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
CTPS2-201ENST00000359276 WIZO95785 1651 aa23.39■■□□□ 1.33
CTPS2-201ENST00000359276 CLIP1P30622 1438 aa23.35■■□□□ 1.33
CTPS2-201ENST00000359276 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
CTPS2-201ENST00000359276 GOLGA3Q08378 1498 aa23.3■■□□□ 1.32
CTPS2-201ENST00000359276 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
CTPS2-201ENST00000359276 ANP32CO43423 234 aa23.21■■□□□ 1.31
CTPS2-201ENST00000359276 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
CTPS2-201ENST00000359276 ATP1B4Q9UN42 357 aaPredicted RBP23.2■■□□□ 1.3
CTPS2-201ENST00000359276 EEA1Q15075 1411 aa23.15■■□□□ 1.3
CTPS2-201ENST00000359276 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
CTPS2-201ENST00000359276 SIN3AQ96ST3 1273 aa23.1■■□□□ 1.29
CTPS2-201ENST00000359276 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
CTPS2-201ENST00000359276 NBR1Q14596 966 aa23.08■■□□□ 1.29
CTPS2-201ENST00000359276 FAM50AQ14320 339 aaKnown RBP23.08■■□□□ 1.29
CTPS2-201ENST00000359276 HNRNPUQ00839 825 aaKnown RBP eCLIP23.08■■□□□ 1.28
CTPS2-201ENST00000359276 MSH5O43196 834 aa23.07■■□□□ 1.28
CTPS2-201ENST00000359276 CEP164Q9UPV0 1460 aa23.02■■□□□ 1.28
CTPS2-201ENST00000359276 CNGB1Q14028 1251 aaPredicted RBP23■■□□□ 1.27
CTPS2-201ENST00000359276 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
CTPS2-201ENST00000359276 DEKP35659 375 aaKnown RBP22.96■■□□□ 1.27
CTPS2-201ENST00000359276 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
CTPS2-201ENST00000359276 RAPGEF2Q9Y4G8 1499 aa22.88■■□□□ 1.25
CTPS2-201ENST00000359276 B4GALNT3Q6L9W6 998 aa22.83■■□□□ 1.25
CTPS2-201ENST00000359276 RTL5Q5HYW3 569 aaPredicted RBP22.83■■□□□ 1.24
CTPS2-201ENST00000359276 CCNB3Q8WWL7 1395 aa22.81■■□□□ 1.24
CTPS2-201ENST00000359276 PRKCSHP14314 528 aaPredicted RBP22.81■■□□□ 1.24
CTPS2-201ENST00000359276 RAB3GAP2Q9H2M9 1393 aa22.8■■□□□ 1.24
CTPS2-201ENST00000359276 FAM9BQ8IZU0 186 aa22.78■■□□□ 1.24
CTPS2-201ENST00000359276 TOP2AP11388 1531 aaKnown RBP22.76■■□□□ 1.23
CTPS2-201ENST00000359276 FANCIQ9NVI1 1328 aa22.76■■□□□ 1.23
CTPS2-201ENST00000359276 CCER2I3L3R5 266 aa22.76■■□□□ 1.23
CTPS2-201ENST00000359276 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
CTPS2-201ENST00000359276 RTN4Q9NQC3 1192 aaKnown RBP22.75■■□□□ 1.23
CTPS2-201ENST00000359276 PPP1R15AO75807 674 aaPredicted RBP22.74■■□□□ 1.23
CTPS2-201ENST00000359276 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms