RNA–Protein interactions for RNA: ENST00000357769.4

THSD4-203, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene THSD4, Length 3,403 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-203ENST00000357769 LRRIQ1Q96JM4 1722 aa13.45□□□□□ -0.26
THSD4-203ENST00000357769 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
THSD4-203ENST00000357769 KDM6BO15054 1643 aa13.45□□□□□ -0.26
THSD4-203ENST00000357769 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
THSD4-203ENST00000357769 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
THSD4-203ENST00000357769 HFM1A2PYH4 1435 aa13.44□□□□□ -0.26
THSD4-203ENST00000357769 RBM19Q9Y4C8 960 aaKnown RBP13.44□□□□□ -0.26
THSD4-203ENST00000357769 PTPN23Q9H3S7 1636 aa13.44□□□□□ -0.26
THSD4-203ENST00000357769 EIF4G2P78344 907 aaKnown RBP eCLIP13.44□□□□□ -0.26
THSD4-203ENST00000357769 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
THSD4-203ENST00000357769 SALL2Q9Y467 1007 aaPredicted RBP13.43□□□□□ -0.26
THSD4-203ENST00000357769 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
THSD4-203ENST00000357769 B4GALNT3Q6L9W6 998 aa13.41□□□□□ -0.26
THSD4-203ENST00000357769 EPRSP07814 1512 aaKnown RBP13.4□□□□□ -0.26
THSD4-203ENST00000357769 CCER2I3L3R5 266 aa13.4□□□□□ -0.26
THSD4-203ENST00000357769 CHD1O14646 1710 aa13.39□□□□□ -0.27
THSD4-203ENST00000357769 EHBP1L1Q8N3D4 1523 aa13.39□□□□□ -0.27
THSD4-203ENST00000357769 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
THSD4-203ENST00000357769 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
THSD4-203ENST00000357769 DENND4BO75064 1496 aaPredicted RBP13.36□□□□□ -0.27
THSD4-203ENST00000357769 PRG4Q92954 1404 aaPredicted RBP13.36□□□□□ -0.27
THSD4-203ENST00000357769 RAPGEF6Q8TEU7 1601 aa13.36□□□□□ -0.27
THSD4-203ENST00000357769 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
THSD4-203ENST00000357769 ANP32EQ9BTT0 268 aa13.35□□□□□ -0.27
THSD4-203ENST00000357769 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
THSD4-203ENST00000357769 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
THSD4-203ENST00000357769 PLB1Q6P1J6 1458 aa13.34□□□□□ -0.27
THSD4-203ENST00000357769 PRKRIP1Q9H875 184 aaPredicted RBP13.32□□□□□ -0.28
THSD4-203ENST00000357769 PTPRGP23470 1445 aa13.32□□□□□ -0.28
THSD4-203ENST00000357769 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
THSD4-203ENST00000357769 PKD2Q13563 968 aa13.31□□□□□ -0.28
THSD4-203ENST00000357769 KDM5BQ9UGL1 1544 aa13.31□□□□□ -0.28
THSD4-203ENST00000357769 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.31□□□□□ -0.28
THSD4-203ENST00000357769 MSH5O43196 834 aa13.3□□□□□ -0.28
THSD4-203ENST00000357769 RGL3Q3MIN7 710 aa13.3□□□□□ -0.28
THSD4-203ENST00000357769 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.28
THSD4-203ENST00000357769 CCDC7Q96M83 1385 aa13.28□□□□□ -0.28
THSD4-203ENST00000357769 PLEKHD1A6NEE1 506 aa13.26□□□□□ -0.29
THSD4-203ENST00000357769 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.29
THSD4-203ENST00000357769 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
THSD4-203ENST00000357769 ABCC5O15440 1437 aa13.25□□□□□ -0.29
THSD4-203ENST00000357769 TROQ12816 1431 aaPredicted RBP13.25□□□□□ -0.29
THSD4-203ENST00000357769 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
THSD4-203ENST00000357769 ABCA8O94911 1581 aa13.25□□□□□ -0.29
THSD4-203ENST00000357769 MYT1Q01538 1121 aa13.25□□□□□ -0.29
THSD4-203ENST00000357769 DAPK1P53355 1430 aa13.24□□□□□ -0.29
THSD4-203ENST00000357769 CNTLNQ9NXG0 1405 aa13.24□□□□□ -0.29
THSD4-203ENST00000357769 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
THSD4-203ENST00000357769 MIA2Q96PC5 1412 aa13.23□□□□□ -0.29
THSD4-203ENST00000357769 AKNAQ7Z591 1439 aa13.23□□□□□ -0.29
THSD4-203ENST00000357769 DCAF11Q8TEB1 546 aa13.23□□□□□ -0.29
THSD4-203ENST00000357769 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
THSD4-203ENST00000357769 CLASP1Q7Z460 1538 aa13.22□□□□□ -0.29
THSD4-203ENST00000357769 CARD11Q9BXL7 1154 aa13.21□□□□□ -0.29
THSD4-203ENST00000357769 ATP10BO94823 1461 aa13.21□□□□□ -0.29
THSD4-203ENST00000357769 NUP155O75694 1391 aa13.19□□□□□ -0.3
THSD4-203ENST00000357769 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
THSD4-203ENST00000357769 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
THSD4-203ENST00000357769 USP47Q96K76 1375 aa13.18□□□□□ -0.3
THSD4-203ENST00000357769 TCOF1Q13428 1488 aaKnown RBP13.18□□□□□ -0.3
THSD4-203ENST00000357769 TMC1Q8TDI8 760 aa13.18□□□□□ -0.3
THSD4-203ENST00000357769 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
THSD4-203ENST00000357769 SENP3Q9H4L4 574 aaPredicted RBP13.17□□□□□ -0.3
THSD4-203ENST00000357769 NBR1Q14596 966 aa13.17□□□□□ -0.3
THSD4-203ENST00000357769 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
THSD4-203ENST00000357769 SKAP1Q86WV1 359 aa13.16□□□□□ -0.3
THSD4-203ENST00000357769 KIF14Q15058 1648 aa13.15□□□□□ -0.3
THSD4-203ENST00000357769 CC2D1BQ5T0F9 858 aaKnown RBP13.15□□□□□ -0.3
THSD4-203ENST00000357769 PPP4R2Q9NY27 417 aa13.14□□□□□ -0.31
THSD4-203ENST00000357769 RPRD2Q5VT52 1461 aaKnown RBP13.14□□□□□ -0.31
THSD4-203ENST00000357769 NPM2Q86SE8 214 aaKnown RBP13.14□□□□□ -0.31
THSD4-203ENST00000357769 ABCC2Q92887 1545 aa13.14□□□□□ -0.31
THSD4-203ENST00000357769 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
THSD4-203ENST00000357769 NBPF1Q3BBV0 1214 aa13.13□□□□□ -0.31
THSD4-203ENST00000357769 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
THSD4-203ENST00000357769 TEX14Q8IWB6 1497 aa13.13□□□□□ -0.31
THSD4-203ENST00000357769 ITSN2Q9NZM3 1697 aa13.13□□□□□ -0.31
THSD4-203ENST00000357769 TSPY4P0CV99 314 aa13.13□□□□□ -0.31
THSD4-203ENST00000357769 TSPY10P0CW01 314 aa13.13□□□□□ -0.31
THSD4-203ENST00000357769 GPATCH8Q9UKJ3 1502 aaKnown RBP13.12□□□□□ -0.31
THSD4-203ENST00000357769 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
THSD4-203ENST00000357769 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
THSD4-203ENST00000357769 PZPP20742 1482 aa13.11□□□□□ -0.31
THSD4-203ENST00000357769 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
THSD4-203ENST00000357769 ANKRD50Q9ULJ7 1429 aa13.09□□□□□ -0.31
THSD4-203ENST00000357769 PLIN1O60240 522 aa13.09□□□□□ -0.31
THSD4-203ENST00000357769 UHRF1BP1LA0JNW5 1464 aa13.08□□□□□ -0.32
THSD4-203ENST00000357769 ABCC10Q5T3U5 1492 aa13.07□□□□□ -0.32
THSD4-203ENST00000357769 CDCA7LQ96GN5 454 aa13.07□□□□□ -0.32
THSD4-203ENST00000357769 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
THSD4-203ENST00000357769 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
THSD4-203ENST00000357769 DNMT1P26358 1616 aaKnown RBP13.06□□□□□ -0.32
THSD4-203ENST00000357769 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
THSD4-203ENST00000357769 SPATA31E1Q6ZUB1 1445 aa13.06□□□□□ -0.32
THSD4-203ENST00000357769 DHX29Q7Z478 1369 aaKnown RBP13.06□□□□□ -0.32
THSD4-203ENST00000357769 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
THSD4-203ENST00000357769 KIAA1107Q9UPP5 1409 aa13.05□□□□□ -0.32
THSD4-203ENST00000357769 ROCK2O75116 1388 aaKnown RBP13.05□□□□□ -0.32
THSD4-203ENST00000357769 ROCK1Q13464 1354 aa13.05□□□□□ -0.32
THSD4-203ENST00000357769 BCL11AQ9H165 835 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms