RNA–Protein interactions for RNA: ENST00000357769.4

THSD4-203, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene THSD4, Length 3,403 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-203ENST00000357769 NISCHQ9Y2I1 1504 aa19.85■□□□□ 0.77
THSD4-203ENST00000357769 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
THSD4-203ENST00000357769 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
THSD4-203ENST00000357769 SUPT5HO00267 1087 aaKnown RBP17.1■□□□□ 0.33
THSD4-203ENST00000357769 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
THSD4-203ENST00000357769 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
THSD4-203ENST00000357769 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
THSD4-203ENST00000357769 ABCC9O60706 1549 aa16.31■□□□□ 0.2
THSD4-203ENST00000357769 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
THSD4-203ENST00000357769 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
THSD4-203ENST00000357769 PCGF6Q9BYE7 350 aa16.19■□□□□ 0.18
THSD4-203ENST00000357769 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
THSD4-203ENST00000357769 LOC105371045A0A1W2PR82 267 aa16.15■□□□□ 0.18
THSD4-203ENST00000357769 NACADO15069 1562 aa16.05■□□□□ 0.16
THSD4-203ENST00000357769 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
THSD4-203ENST00000357769 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
THSD4-203ENST00000357769 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
THSD4-203ENST00000357769 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
THSD4-203ENST00000357769 HRCP23327 699 aa15.88■□□□□ 0.13
THSD4-203ENST00000357769 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
THSD4-203ENST00000357769 TTBK1Q5TCY1 1321 aaPredicted RBP15.58■□□□□ 0.09
THSD4-203ENST00000357769 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
THSD4-203ENST00000357769 RSF1Q96T23 1441 aaPredicted RBP15.49■□□□□ 0.07
THSD4-203ENST00000357769 TRIM26Q12899 539 aaPredicted RBP15.46■□□□□ 0.06
THSD4-203ENST00000357769 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
THSD4-203ENST00000357769 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
THSD4-203ENST00000357769 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
THSD4-203ENST00000357769 MROH2BQ7Z745 1585 aa15.35■□□□□ 0.05
THSD4-203ENST00000357769 BAZ1AQ9NRL2 1556 aaPredicted RBP15.34■□□□□ 0.05
THSD4-203ENST00000357769 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
THSD4-203ENST00000357769 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
THSD4-203ENST00000357769 WIZO95785 1651 aa15.22■□□□□ 0.03
THSD4-203ENST00000357769 RANGAP1P46060 587 aaPredicted RBP15.16■□□□□ 0.02
THSD4-203ENST00000357769 CCER1Q8TC90 406 aaPredicted RBP15.07■□□□□ 0
THSD4-203ENST00000357769 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
THSD4-203ENST00000357769 ABCC8Q09428 1581 aa15.03■□□□□ -0
THSD4-203ENST00000357769 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
THSD4-203ENST00000357769 PEG3Q9GZU2 1588 aa15□□□□□ -0.01
THSD4-203ENST00000357769 SMARCA2P51531 1590 aa14.98□□□□□ -0.01
THSD4-203ENST00000357769 ATAD2BQ9ULI0 1458 aa14.98□□□□□ -0.01
THSD4-203ENST00000357769 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
THSD4-203ENST00000357769 CCDC88BA6NC98 1476 aa14.94□□□□□ -0.02
THSD4-203ENST00000357769 BAZ1BQ9UIG0 1483 aaKnown RBP14.94□□□□□ -0.02
THSD4-203ENST00000357769 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
THSD4-203ENST00000357769 SOGA1O94964 1423 aa14.92□□□□□ -0.02
THSD4-203ENST00000357769 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
THSD4-203ENST00000357769 RUSC2Q8N2Y8 1516 aa14.88□□□□□ -0.03
THSD4-203ENST00000357769 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
THSD4-203ENST00000357769 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
THSD4-203ENST00000357769 YTHDC1Q96MU7 727 aaKnown RBP14.8□□□□□ -0.04
THSD4-203ENST00000357769 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
THSD4-203ENST00000357769 CEP162Q5TB80 1403 aa14.77□□□□□ -0.05
THSD4-203ENST00000357769 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
THSD4-203ENST00000357769 NEUROD1Q13562 356 aa14.72□□□□□ -0.05
THSD4-203ENST00000357769 DIEXFQ68CQ4 756 aaKnown RBP14.72□□□□□ -0.05
THSD4-203ENST00000357769 CC2D2AQ9P2K1 1620 aa14.7□□□□□ -0.06
THSD4-203ENST00000357769 GTF3C3Q9Y5Q9 886 aa14.6□□□□□ -0.07
THSD4-203ENST00000357769 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
THSD4-203ENST00000357769 ITGAEP38570 1179 aa14.58□□□□□ -0.08
THSD4-203ENST00000357769 APLP2Q06481 763 aa14.57□□□□□ -0.08
THSD4-203ENST00000357769 ACIN1Q9UKV3 1341 aaKnown RBP14.56□□□□□ -0.08
THSD4-203ENST00000357769 TNIKQ9UKE5 1360 aa14.55□□□□□ -0.08
THSD4-203ENST00000357769 CFTRP13569 1480 aa14.53□□□□□ -0.08
THSD4-203ENST00000357769 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
THSD4-203ENST00000357769 SYNJ1O43426 1573 aa14.49□□□□□ -0.09
THSD4-203ENST00000357769 GOLGA3Q08378 1498 aa14.49□□□□□ -0.09
THSD4-203ENST00000357769 CLIP1P30622 1438 aa14.48□□□□□ -0.09
THSD4-203ENST00000357769 MIER1Q8N108 512 aa14.47□□□□□ -0.09
THSD4-203ENST00000357769 RAPGEF2Q9Y4G8 1499 aa14.47□□□□□ -0.09
THSD4-203ENST00000357769 ZNF316A6NFI3 1004 aaPredicted RBP14.46□□□□□ -0.09
THSD4-203ENST00000357769 EEA1Q15075 1411 aa14.43□□□□□ -0.1
THSD4-203ENST00000357769 CENPBP07199 599 aaPredicted RBP14.42□□□□□ -0.1
THSD4-203ENST00000357769 ATP1B4Q9UN42 357 aaPredicted RBP14.41□□□□□ -0.1
THSD4-203ENST00000357769 KANK4Q5T7N3 995 aaPredicted RBP14.41□□□□□ -0.1
THSD4-203ENST00000357769 TOP2BQ02880 1626 aa14.39□□□□□ -0.11
THSD4-203ENST00000357769 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
THSD4-203ENST00000357769 P3H3Q8IVL6 736 aa14.37□□□□□ -0.11
THSD4-203ENST00000357769 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
THSD4-203ENST00000357769 BIVM-ERCC5R4GMW8 1640 aa14.35□□□□□ -0.11
THSD4-203ENST00000357769 CUX1P39880 1505 aa14.34□□□□□ -0.11
THSD4-203ENST00000357769 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
THSD4-203ENST00000357769 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
THSD4-203ENST00000357769 NESP48681 1621 aa14.32□□□□□ -0.12
THSD4-203ENST00000357769 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
THSD4-203ENST00000357769 VPS8Q8N3P4 1428 aa14.3□□□□□ -0.12
THSD4-203ENST00000357769 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
THSD4-203ENST00000357769 KIF21BO75037 1637 aa14.24□□□□□ -0.13
THSD4-203ENST00000357769 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
THSD4-203ENST00000357769 KIF27Q86VH2 1401 aa14.23□□□□□ -0.13
THSD4-203ENST00000357769 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
THSD4-203ENST00000357769 FAM50AQ14320 339 aaKnown RBP14.19□□□□□ -0.14
THSD4-203ENST00000357769 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
THSD4-203ENST00000357769 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
THSD4-203ENST00000357769 ARAP1Q96P48 1450 aa14.17□□□□□ -0.14
THSD4-203ENST00000357769 TOPBP1Q92547 1522 aa14.16□□□□□ -0.14
THSD4-203ENST00000357769 CUX2O14529 1486 aa14.16□□□□□ -0.14
THSD4-203ENST00000357769 PELP1Q8IZL8 1130 aaKnown RBP14.13□□□□□ -0.15
THSD4-203ENST00000357769 DHX57Q6P158 1386 aaKnown RBP14.13□□□□□ -0.15
THSD4-203ENST00000357769 SIN3AQ96ST3 1273 aa14.12□□□□□ -0.15
THSD4-203ENST00000357769 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms