RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 CHMP4BQ9H444 224 aaKnown RBP23.39■■□□□ 1.33
TNPO2-201ENST00000356861 RALBP1Q15311 655 aa23.39■■□□□ 1.33
TNPO2-201ENST00000356861 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
TNPO2-201ENST00000356861 GGT6Q6P531 493 aa23.36■■□□□ 1.33
TNPO2-201ENST00000356861 SRPK2P78362 688 aaKnown RBP23.35■■□□□ 1.33
TNPO2-201ENST00000356861 CASC1Q6TDU7 716 aa23.35■■□□□ 1.33
TNPO2-201ENST00000356861 RBM19Q9Y4C8 960 aaKnown RBP23.33■■□□□ 1.33
TNPO2-201ENST00000356861 NCLP19338 710 aaKnown RBP23.33■■□□□ 1.32
TNPO2-201ENST00000356861 RSPH4AQ5TD94 716 aa23.32■■□□□ 1.32
TNPO2-201ENST00000356861 HNRNPMP52272 730 aaKnown RBP eCLIP23.3■■□□□ 1.32
TNPO2-201ENST00000356861 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
TNPO2-201ENST00000356861 SAFB2Q14151 953 aaKnown RBP eCLIP23.29■■□□□ 1.32
TNPO2-201ENST00000356861 A0A0G2JS52 829 aa23.29■■□□□ 1.32
TNPO2-201ENST00000356861 RCAN3Q9UKA8 241 aa23.29■■□□□ 1.32
TNPO2-201ENST00000356861 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
TNPO2-201ENST00000356861 TRIM44Q96DX7 344 aaPredicted RBP23.28■■□□□ 1.32
TNPO2-201ENST00000356861 HDGFP51858 240 aaKnown RBP23.28■■□□□ 1.32
TNPO2-201ENST00000356861 IGF1RP08069 1367 aa23.23■■□□□ 1.31
TNPO2-201ENST00000356861 MLECQ14165 292 aa23.23■■□□□ 1.31
TNPO2-201ENST00000356861 GLIPR1L2Q4G1C9 344 aa23.22■■□□□ 1.31
TNPO2-201ENST00000356861 NLRP13Q86W25 1043 aa23.22■■□□□ 1.31
TNPO2-201ENST00000356861 STK26Q9P289 416 aa23.22■■□□□ 1.31
TNPO2-201ENST00000356861 KIF3BO15066 747 aa23.21■■□□□ 1.31
TNPO2-201ENST00000356861 LMOD2Q6P5Q4 547 aa23.21■■□□□ 1.31
TNPO2-201ENST00000356861 HAP1P54257 671 aaPredicted RBP23.2■■□□□ 1.3
TNPO2-201ENST00000356861 HDGFL2Q7Z4V5 671 aaPredicted RBP23.18■■□□□ 1.3
TNPO2-201ENST00000356861 EIF3AQ14152 1382 aaKnown RBP23.18■■□□□ 1.3
TNPO2-201ENST00000356861 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
TNPO2-201ENST00000356861 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
TNPO2-201ENST00000356861 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.3
TNPO2-201ENST00000356861 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.3
TNPO2-201ENST00000356861 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
TNPO2-201ENST00000356861 PDE3BQ13370 1112 aa23.12■■□□□ 1.29
TNPO2-201ENST00000356861 TCERG1O14776 1098 aaKnown RBP23.12■■□□□ 1.29
TNPO2-201ENST00000356861 SOX12O15370 315 aa23.12■■□□□ 1.29
TNPO2-201ENST00000356861 TSHZ2Q9NRE2 1034 aa23.12■■□□□ 1.29
TNPO2-201ENST00000356861 ST20-MTHFSA0A0A6YYL1 179 aa23.12■■□□□ 1.29
TNPO2-201ENST00000356861 IPO8O15397 1037 aaKnown RBP23.11■■□□□ 1.29
TNPO2-201ENST00000356861 GOLGA2Q08379 1002 aa23.09■■□□□ 1.29
TNPO2-201ENST00000356861 PRKRIP1Q9H875 184 aaPredicted RBP23.09■■□□□ 1.29
TNPO2-201ENST00000356861 KIF15Q9NS87 1388 aa23.08■■□□□ 1.29
TNPO2-201ENST00000356861 CCDC144AA2RUR9 1427 aa23.08■■□□□ 1.29
TNPO2-201ENST00000356861 OS9Q13438 667 aaPredicted RBP23.08■■□□□ 1.28
TNPO2-201ENST00000356861 HSCBQ8IWL3 235 aa23.08■■□□□ 1.28
TNPO2-201ENST00000356861 KIF21BO75037 1637 aa23.07■■□□□ 1.28
TNPO2-201ENST00000356861 PHLDB1Q86UU1 1377 aa23.07■■□□□ 1.28
TNPO2-201ENST00000356861 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
TNPO2-201ENST00000356861 PTMAP06454 111 aaKnown RBP23.05■■□□□ 1.28
TNPO2-201ENST00000356861 CALD1Q05682 793 aaKnown RBP23.05■■□□□ 1.28
TNPO2-201ENST00000356861 MYBBP1AQ9BQG0 1328 aaKnown RBP23.05■■□□□ 1.28
TNPO2-201ENST00000356861 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
TNPO2-201ENST00000356861 RTF1Q92541 710 aaKnown RBP23.03■■□□□ 1.28
TNPO2-201ENST00000356861 RWDD1Q9H446 243 aaPredicted RBP23.03■■□□□ 1.28
TNPO2-201ENST00000356861 FGD6Q6ZV73 1430 aa23.03■■□□□ 1.28
TNPO2-201ENST00000356861 PTPRGP23470 1445 aa23.02■■□□□ 1.28
TNPO2-201ENST00000356861 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
TNPO2-201ENST00000356861 TERF2IPQ9NYB0 399 aa23.01■■□□□ 1.27
TNPO2-201ENST00000356861 WASHC2CQ9Y4E1 1318 aa23.01■■□□□ 1.27
TNPO2-201ENST00000356861 ZRSR1Q15695 479 aaKnown RBP23.01■■□□□ 1.27
TNPO2-201ENST00000356861 CFAP44Q96MT7 982 aa23.01■■□□□ 1.27
TNPO2-201ENST00000356861 USP47Q96K76 1375 aa23■■□□□ 1.27
TNPO2-201ENST00000356861 PANK3Q9H999 370 aa22.99■■□□□ 1.27
TNPO2-201ENST00000356861 MYOM3Q5VTT5 1437 aa22.98■■□□□ 1.27
TNPO2-201ENST00000356861 TPRNQ4KMQ1 711 aa22.98■■□□□ 1.27
TNPO2-201ENST00000356861 KCNJ4P48050 445 aa22.98■■□□□ 1.27
TNPO2-201ENST00000356861 ITPRIPQ8IWB1 547 aa22.98■■□□□ 1.27
TNPO2-201ENST00000356861 CCDC146Q8IYE0 955 aa22.97■■□□□ 1.27
TNPO2-201ENST00000356861 LRRC9Q6ZRR7 1453 aa22.97■■□□□ 1.27
TNPO2-201ENST00000356861 ZBED9Q6R2W3 1325 aa22.95■■□□□ 1.26
TNPO2-201ENST00000356861 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
TNPO2-201ENST00000356861 DEKP35659 375 aaKnown RBP22.95■■□□□ 1.26
TNPO2-201ENST00000356861 UACAQ9BZF9 1416 aa22.94■■□□□ 1.26
TNPO2-201ENST00000356861 TRAK1Q9UPV9 953 aa22.93■■□□□ 1.26
TNPO2-201ENST00000356861 FGD1P98174 961 aa22.93■■□□□ 1.26
TNPO2-201ENST00000356861 CENPJQ9HC77 1338 aaPredicted RBP22.93■■□□□ 1.26
TNPO2-201ENST00000356861 SMC4Q9NTJ3 1288 aa22.93■■□□□ 1.26
TNPO2-201ENST00000356861 MCCP23508 829 aa22.92■■□□□ 1.26
TNPO2-201ENST00000356861 CUX1P39880 1505 aa22.91■■□□□ 1.26
TNPO2-201ENST00000356861 NUTM2DQ5VT03 806 aaPredicted RBP22.91■■□□□ 1.26
TNPO2-201ENST00000356861 SPRYD3Q8NCJ5 442 aa22.91■■□□□ 1.26
TNPO2-201ENST00000356861 RTN4Q9NQC3 1192 aaKnown RBP22.9■■□□□ 1.26
TNPO2-201ENST00000356861 TRHP20396 242 aaPredicted RBP22.9■■□□□ 1.26
TNPO2-201ENST00000356861 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.26
TNPO2-201ENST00000356861 DNTTIP2Q5QJE6 756 aaKnown RBP22.89■■□□□ 1.25
TNPO2-201ENST00000356861 IPO9Q96P70 1041 aaKnown RBP22.89■■□□□ 1.25
TNPO2-201ENST00000356861 APBB1O00213 710 aa22.89■■□□□ 1.25
TNPO2-201ENST00000356861 CASKIN1Q8WXD9 1431 aa22.88■■□□□ 1.25
TNPO2-201ENST00000356861 CLUAP1Q96AJ1 413 aa22.88■■□□□ 1.25
TNPO2-201ENST00000356861 ZNF644Q9H582 1327 aaPredicted RBP22.88■■□□□ 1.25
TNPO2-201ENST00000356861 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
TNPO2-201ENST00000356861 L1TD1Q5T7N2 865 aaKnown RBP22.86■■□□□ 1.25
TNPO2-201ENST00000356861 PLCB2Q00722 1185 aa22.85■■□□□ 1.25
TNPO2-201ENST00000356861 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
TNPO2-201ENST00000356861 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
TNPO2-201ENST00000356861 SLKQ9H2G2 1235 aaPredicted RBP22.82■■□□□ 1.24
TNPO2-201ENST00000356861 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
TNPO2-201ENST00000356861 NCOA2Q15596 1464 aa22.82■■□□□ 1.24
TNPO2-201ENST00000356861 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
TNPO2-201ENST00000356861 CFTRP13569 1480 aa22.81■■□□□ 1.24
TNPO2-201ENST00000356861 NAP1L5Q96NT1 182 aaPredicted RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms