RNA–Protein interactions for RNA: ENST00000345097.8

FOXN3-202, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXN3, Length 7,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-202ENST00000345097 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
FOXN3-202ENST00000345097 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
FOXN3-202ENST00000345097 BECN1Q14457 450 aa11.79□□□□□ -0.52
FOXN3-202ENST00000345097 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-202ENST00000345097 KIF21BO75037 1637 aa11.79□□□□□ -0.52
FOXN3-202ENST00000345097 FRAT1Q92837 279 aaPredicted RBP11.79□□□□□ -0.52
FOXN3-202ENST00000345097 ANKRD30AQ9BXX3 1397 aa11.78□□□□□ -0.52
FOXN3-202ENST00000345097 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.524e-7■■■□□ 16.7
FOXN3-202ENST00000345097 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
FOXN3-202ENST00000345097 B4GALNT3Q6L9W6 998 aa11.77□□□□□ -0.52
FOXN3-202ENST00000345097 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
FOXN3-202ENST00000345097 KIF3BO15066 747 aa11.75□□□□□ -0.53
FOXN3-202ENST00000345097 IGF1RP08069 1367 aa11.75□□□□□ -0.53
FOXN3-202ENST00000345097 TRIM44Q96DX7 344 aaPredicted RBP11.75□□□□□ -0.53
FOXN3-202ENST00000345097 L3MBTL2Q969R5 705 aa11.74□□□□□ -0.53
FOXN3-202ENST00000345097 TOP2BQ02880 1626 aa11.73□□□□□ -0.53
FOXN3-202ENST00000345097 EFCAB2Q5VUJ9 269 aa11.73□□□□□ -0.53
FOXN3-202ENST00000345097 DHX57Q6P158 1386 aaKnown RBP11.73□□□□□ -0.53
FOXN3-202ENST00000345097 CUX1P39880 1505 aa11.72□□□□□ -0.53
FOXN3-202ENST00000345097 MORC1Q86VD1 984 aa11.72□□□□□ -0.53
FOXN3-202ENST00000345097 ERICH6BQ5W0A0 696 aa11.72□□□□□ -0.53
FOXN3-202ENST00000345097 RGS3P49796 1198 aa11.71□□□□□ -0.53
FOXN3-202ENST00000345097 NCAPD3P42695 1498 aa11.71□□□□□ -0.53
FOXN3-202ENST00000345097 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
FOXN3-202ENST00000345097 SPAG9O60271 1321 aaKnown RBP11.7□□□□□ -0.54
FOXN3-202ENST00000345097 GOLGA6L22H0YM25 854 aa11.7□□□□□ -0.54
FOXN3-202ENST00000345097 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
FOXN3-202ENST00000345097 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
FOXN3-202ENST00000345097 KTN1Q86UP2 1357 aaKnown RBP11.69□□□□□ -0.54
FOXN3-202ENST00000345097 ZNF644Q9H582 1327 aaPredicted RBP11.69□□□□□ -0.54
FOXN3-202ENST00000345097 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
FOXN3-202ENST00000345097 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
FOXN3-202ENST00000345097 PTPRGP23470 1445 aa11.67□□□□□ -0.54
FOXN3-202ENST00000345097 LRRC9Q6ZRR7 1453 aa11.66□□□□□ -0.54
FOXN3-202ENST00000345097 PAK3O75914 559 aaPredicted RBP11.66□□□□□ -0.54
FOXN3-202ENST00000345097 WASHC2CQ9Y4E1 1318 aa11.66□□□□□ -0.54
FOXN3-202ENST00000345097 CCER2I3L3R5 266 aa11.66□□□□□ -0.54
FOXN3-202ENST00000345097 CCDC146Q8IYE0 955 aa11.66□□□□□ -0.54
FOXN3-202ENST00000345097 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
FOXN3-202ENST00000345097 CFTRP13569 1480 aa11.65□□□□□ -0.55
FOXN3-202ENST00000345097 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
FOXN3-202ENST00000345097 PHLDB1Q86UU1 1377 aa11.64□□□□□ -0.55
FOXN3-202ENST00000345097 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
FOXN3-202ENST00000345097 TRAK1Q9UPV9 953 aa11.63□□□□□ -0.55
FOXN3-202ENST00000345097 ERICH3Q5RHP9 1530 aa11.63□□□□□ -0.55
FOXN3-202ENST00000345097 NCLP19338 710 aaKnown RBP11.63□□□□□ -0.55
FOXN3-202ENST00000345097 TOPBP1Q92547 1522 aa11.62□□□□□ -0.55
FOXN3-202ENST00000345097 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
FOXN3-202ENST00000345097 HDGFP51858 240 aaKnown RBP11.61□□□□□ -0.55
FOXN3-202ENST00000345097 TAOK2Q9UL54 1235 aa11.61□□□□□ -0.55
FOXN3-202ENST00000345097 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
FOXN3-202ENST00000345097 FGD6Q6ZV73 1430 aa11.61□□□□□ -0.55
FOXN3-202ENST00000345097 HDGFL2Q7Z4V5 671 aaPredicted RBP11.61□□□□□ -0.55
FOXN3-202ENST00000345097 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
FOXN3-202ENST00000345097 ST20-MTHFSA0A0A6YYL1 179 aa11.6□□□□□ -0.55
FOXN3-202ENST00000345097 SUPT6HQ7KZ85 1726 aaKnown RBP11.6□□□□□ -0.55
FOXN3-202ENST00000345097 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.6□□□□□ -0.553e-7■■■□□ 14.7
FOXN3-202ENST00000345097 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
FOXN3-202ENST00000345097 ARHGAP5Q13017 1502 aa11.59□□□□□ -0.55
FOXN3-202ENST00000345097 EIF3AQ14152 1382 aaKnown RBP11.59□□□□□ -0.55
FOXN3-202ENST00000345097 U2AF1L5P0DN76 240 aaPredicted RBP11.59□□□□□ -0.55
FOXN3-202ENST00000345097 U2AF1Q01081 240 aaKnown RBP eCLIP11.59□□□□□ -0.552e-7■□□□□ 8.2
FOXN3-202ENST00000345097 PNNQ9H307 717 aaKnown RBP11.59□□□□□ -0.55
FOXN3-202ENST00000345097 MRC2Q9UBG0 1479 aa11.59□□□□□ -0.55
FOXN3-202ENST00000345097 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
FOXN3-202ENST00000345097 DNMBPQ6XZF7 1577 aa11.58□□□□□ -0.56
FOXN3-202ENST00000345097 GRIN2BQ13224 1484 aa11.58□□□□□ -0.56
FOXN3-202ENST00000345097 MYOM3Q5VTT5 1437 aa11.58□□□□□ -0.56
FOXN3-202ENST00000345097 SPRYD3Q8NCJ5 442 aa11.57□□□□□ -0.56
FOXN3-202ENST00000345097 RALBP1Q15311 655 aa11.57□□□□□ -0.56
FOXN3-202ENST00000345097 CASC1Q6TDU7 716 aa11.57□□□□□ -0.56
FOXN3-202ENST00000345097 CASKIN1Q8WXD9 1431 aa11.57□□□□□ -0.56
FOXN3-202ENST00000345097 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
FOXN3-202ENST00000345097 PANK3Q9H999 370 aa11.56□□□□□ -0.56
FOXN3-202ENST00000345097 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
FOXN3-202ENST00000345097 OS9Q13438 667 aaPredicted RBP11.56□□□□□ -0.56
FOXN3-202ENST00000345097 APBB1O00213 710 aa11.56□□□□□ -0.56
FOXN3-202ENST00000345097 RSPH4AQ5TD94 716 aa11.56□□□□□ -0.56
FOXN3-202ENST00000345097 RCAN3Q9UKA8 241 aa11.56□□□□□ -0.56
FOXN3-202ENST00000345097 HECW1Q76N89 1606 aa11.55□□□□□ -0.56
FOXN3-202ENST00000345097 USP47Q96K76 1375 aa11.55□□□□□ -0.56
FOXN3-202ENST00000345097 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
FOXN3-202ENST00000345097 PCF11O94913 1555 aaKnown RBP11.55□□□□□ -0.56
FOXN3-202ENST00000345097 OSCARQ8IYS5 282 aa11.54□□□□□ -0.56
FOXN3-202ENST00000345097 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
FOXN3-202ENST00000345097 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
FOXN3-202ENST00000345097 PTMAP06454 111 aaKnown RBP11.52□□□□□ -0.56
FOXN3-202ENST00000345097 CDK13Q14004 1512 aaKnown RBP11.52□□□□□ -0.57
FOXN3-202ENST00000345097 KIF15Q9NS87 1388 aa11.52□□□□□ -0.57
FOXN3-202ENST00000345097 NPHP1O15259 732 aa11.52□□□□□ -0.57
FOXN3-202ENST00000345097 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
FOXN3-202ENST00000345097 ITPRIPQ8IWB1 547 aa11.51□□□□□ -0.57
FOXN3-202ENST00000345097 LTV1Q96GA3 475 aaPredicted RBP11.51□□□□□ -0.57
FOXN3-202ENST00000345097 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
FOXN3-202ENST00000345097 CUL7Q14999 1698 aa11.51□□□□□ -0.57
FOXN3-202ENST00000345097 PRG4Q92954 1404 aaPredicted RBP11.51□□□□□ -0.57
FOXN3-202ENST00000345097 NAP1L5Q96NT1 182 aaPredicted RBP11.51□□□□□ -0.57
FOXN3-202ENST00000345097 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
FOXN3-202ENST00000345097 CDK11BP21127 795 aaKnown RBP11.5□□□□□ -0.57
FOXN3-202ENST00000345097 EFCAB5A4FU69 1503 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms