RNA–Protein interactions for RNA: ENST00000345097.8

FOXN3-202, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXN3, Length 7,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-202ENST00000345097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.755e-8■■■■■ 197.4
FOXN3-202ENST00000345097 SF3B1O75533 1304 aaKnown RBP eCLIP9.15□□□□□ -0.953e-6■■■■■ 137.9
FOXN3-202ENST00000345097 SF3B4Q15427 424 aaKnown RBP eCLIP8.25□□□□□ -1.098e-18■■■■■ 59.1
FOXN3-202ENST00000345097 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.39□□□□□ -0.919e-10■■■■■ 56.1
FOXN3-202ENST00000345097 DKC1O60832 514 aaKnown RBP eCLIP9.9□□□□□ -0.824e-10■■■■■ 53.1
FOXN3-202ENST00000345097 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.56□□□□□ -0.882e-6■■■■■ 48.3
FOXN3-202ENST00000345097 PCBP2Q15366 365 aaKnown RBP eCLIP8.83□□□□□ -17e-7■■■■■ 43.2
FOXN3-202ENST00000345097 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.48□□□□□ -0.893e-6■■■■■ 37.7
FOXN3-202ENST00000345097 RBFOX2O43251 390 aaKnown RBP eCLIP7.61□□□□□ -1.196e-7■■■■■ 35.7
FOXN3-202ENST00000345097 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.54□□□□□ -1.045e-7■■■■■ 35.6
FOXN3-202ENST00000345097 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.2□□□□□ -1.12e-6■■■■■ 35.4
FOXN3-202ENST00000345097 BCCIPQ9P287 314 aaKnown RBP eCLIP10.21□□□□□ -0.778e-8■■■■■ 34.1
FOXN3-202ENST00000345097 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.42□□□□□ -0.91e-6■■■■■ 33.1
FOXN3-202ENST00000345097 FTOQ9C0B1 505 aaKnown RBP eCLIP10.08□□□□□ -0.86e-7■■■■■ 30.4
FOXN3-202ENST00000345097 SRSF9Q13242 221 aaKnown RBP eCLIP7.75□□□□□ -1.173e-8■■■■□ 26.7
FOXN3-202ENST00000345097 GTF2F1P35269 517 aaKnown RBP eCLIP10.24□□□□□ -0.771e-6■■■■□ 25.9
FOXN3-202ENST00000345097 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.34□□□□□ -0.755e-6■■■■□ 25.3
FOXN3-202ENST00000345097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.12□□□□□ -0.796e-7■■■■□ 24.5
FOXN3-202ENST00000345097 CSTF2P33240 577 aaKnown RBP eCLIP8.71□□□□□ -1.022e-7■■■■□ 23.2
FOXN3-202ENST00000345097 EFTUD2Q15029 972 aaKnown RBP eCLIP9.42□□□□□ -0.93e-7■■■■□ 23
FOXN3-202ENST00000345097 QKIQ96PU8 341 aaKnown RBP eCLIP9.04□□□□□ -0.968e-7■■■■□ 22.5
FOXN3-202ENST00000345097 PCBP1Q15365 356 aaKnown RBP eCLIP9.1□□□□□ -0.955e-7■■■■□ 21.5
FOXN3-202ENST00000345097 KHSRPQ92945 711 aaKnown RBP eCLIP8.59□□□□□ -1.035e-7■■■■□ 21.2
FOXN3-202ENST00000345097 SRSF7Q16629 238 aaKnown RBP eCLIP7.49□□□□□ -1.212e-6■■■■□ 21.1
FOXN3-202ENST00000345097 PTBP1P26599 531 aaKnown RBP eCLIP8.36□□□□□ -1.072e-7■■■■□ 20.9
FOXN3-202ENST00000345097 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.58e-7■■■■□ 20.1
FOXN3-202ENST00000345097 HNRNPA1P09651 372 aaKnown RBP eCLIP8.66□□□□□ -1.024e-7■■■■□ 19.5
FOXN3-202ENST00000345097 HNRNPLP14866 589 aaKnown RBP eCLIP9.08□□□□□ -0.966e-9■■■□□ 19.2
FOXN3-202ENST00000345097 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.57□□□□□ -0.882e-6■■■□□ 18.6
FOXN3-202ENST00000345097 NKRFO15226 690 aaKnown RBP eCLIP9.31□□□□□ -0.928e-7■■■□□ 18.4
FOXN3-202ENST00000345097 IGF2BP3O00425 579 aaKnown RBP eCLIP9.33□□□□□ -0.922e-6■■■□□ 18.3
FOXN3-202ENST00000345097 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.04□□□□□ -0.961e-5■■■□□ 18
FOXN3-202ENST00000345097 HNRNPKP61978 463 aaKnown RBP eCLIP8.53□□□□□ -1.041e-6■■■□□ 17.5
FOXN3-202ENST00000345097 MATR3P43243 847 aaKnown RBP eCLIP10.46□□□□□ -0.738e-7■■■□□ 17.4
FOXN3-202ENST00000345097 TIAL1Q01085 375 aaKnown RBP eCLIP8.27□□□□□ -1.098e-7■■■□□ 17
FOXN3-202ENST00000345097 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.11□□□□□ -0.951e-6■■■□□ 16.9
FOXN3-202ENST00000345097 AQRO60306 1485 aaKnown RBP eCLIP11.78□□□□□ -0.524e-7■■■□□ 16.7
FOXN3-202ENST00000345097 PRPF4O43172 522 aaKnown RBP eCLIP9.34□□□□□ -0.912e-6■■■□□ 16.5
FOXN3-202ENST00000345097 RBM15Q96T37 977 aaKnown RBP eCLIP9.43□□□□□ -0.93e-7■■■□□ 16.2
FOXN3-202ENST00000345097 U2AF2P26368 475 aaKnown RBP eCLIP9.97□□□□□ -0.811e-6■■■□□ 16.2
FOXN3-202ENST00000345097 LSM11P83369 360 aaKnown RBP eCLIP8.08□□□□□ -1.125e-7■■■□□ 16.1
FOXN3-202ENST00000345097 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.45□□□□□ -0.99e-7■■■□□ 15.7
FOXN3-202ENST00000345097 DDX3XO00571 662 aaKnown RBP eCLIP9.34□□□□□ -0.912e-7■■■□□ 15.4
FOXN3-202ENST00000345097 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.6□□□□□ -0.553e-7■■■□□ 14.7
FOXN3-202ENST00000345097 HNRNPCP07910 306 aaKnown RBP eCLIP9.44□□□□□ -0.92e-6■■□□□ 14.3
FOXN3-202ENST00000345097 HLTFQ14527 1009 aaKnown RBP eCLIP10.2□□□□□ -0.782e-6■■□□□ 13.7
FOXN3-202ENST00000345097 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.53□□□□□ -1.046e-7■■□□□ 13.5
FOXN3-202ENST00000345097 ILF3Q12906 894 aaKnown RBP eCLIP8.77□□□□□ -1.012e-6■■□□□ 13
FOXN3-202ENST00000345097 AGGF1Q8N302 714 aaeCLIP9.44□□□□□ -0.94e-6■■□□□ 12.6
FOXN3-202ENST00000345097 FXR2P51116 673 aaKnown RBP eCLIP9.59□□□□□ -0.874e-6■■□□□ 12.2
FOXN3-202ENST00000345097 TAF15Q92804 592 aaKnown RBP eCLIP7.71□□□□□ -1.182e-6■■□□□ 11.9
FOXN3-202ENST00000345097 RBM22Q9NW64 420 aaKnown RBP eCLIP9.25□□□□□ -0.931e-6■■□□□ 11.4
FOXN3-202ENST00000345097 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.87□□□□□ -0.997e-6■□□□□ 11
FOXN3-202ENST00000345097 FUSP35637 526 aaKnown RBP eCLIP6.92□□□□□ -1.33e-8■□□□□ 10.9
FOXN3-202ENST00000345097 SFPQP23246 707 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■□□□□ 10.4
FOXN3-202ENST00000345097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.1□□□□□ -0.792e-6■□□□□ 10.4
FOXN3-202ENST00000345097 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.96□□□□□ -0.817e-7■□□□□ 10.3
FOXN3-202ENST00000345097 FUBP3Q96I24 572 aaKnown RBP eCLIP8.89□□□□□ -0.998e-7■□□□□ 10.2
FOXN3-202ENST00000345097 PPIGQ13427 754 aaKnown RBP eCLIP8.94□□□□□ -0.986e-8■□□□□ 10.1
FOXN3-202ENST00000345097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■□□□□ 10
FOXN3-202ENST00000345097 NCBP2P52298 156 aaKnown RBP eCLIP8.8□□□□□ -11e-6■□□□□ 9.8
FOXN3-202ENST00000345097 CDC40O60508 579 aaKnown RBP eCLIP8.64□□□□□ -1.033e-6■□□□□ 9.5
FOXN3-202ENST00000345097 YBX3P16989 372 aaKnown RBP eCLIP9.25□□□□□ -0.935e-7■□□□□ 8.3
FOXN3-202ENST00000345097 U2AF1Q01081 240 aaKnown RBP eCLIP11.59□□□□□ -0.552e-7■□□□□ 8.2
Retrieved 64 of 64 RNA–protein pairs in 20.5 ms